EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000018202 (Gene tree)
Gene ID: 111833737
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 4678 bases
Position: chrPGUA01000460.1:155867-160544
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000041838	zf-C2H2	PF00096.26	5.2e-27	1	5
ENSPKIP00000041838	zf-C2H2	PF00096.26	5.2e-27	2	5
ENSPKIP00000041838	zf-C2H2	PF00096.26	5.2e-27	3	5
ENSPKIP00000041838	zf-C2H2	PF00096.26	5.2e-27	4	5
ENSPKIP00000041838	zf-C2H2	PF00096.26	5.2e-27	5	5
ENSPKIP00000041816	zf-C2H2	PF00096.26	7.4e-24	1	5
ENSPKIP00000041816	zf-C2H2	PF00096.26	7.4e-24	2	5
ENSPKIP00000041816	zf-C2H2	PF00096.26	7.4e-24	3	5
ENSPKIP00000041816	zf-C2H2	PF00096.26	7.4e-24	4	5
ENSPKIP00000041816	zf-C2H2	PF00096.26	7.4e-24	5	5
ENSPKIP00000041838	zf-met	PF12874.7	3.1e-08	1	1
ENSPKIP00000041816	zf-met	PF12874.7	6.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000022880	-	1416	-	ENSPKIP00000041838	471 (aa)	-	-
ENSPKIT00000022856	-	825	-	ENSPKIP00000041816	274 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000018202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000018202's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000018202	-	71	30.964	ENSPKIG00000020324	-	53	32.022
ENSPKIG00000018202	-	74	37.963	ENSPKIG00000015139	znf319b	81	37.963
ENSPKIG00000018202	-	74	45.349	ENSPKIG00000010773	-	88	45.349
ENSPKIG00000018202	-	70	40.952	ENSPKIG00000001942	e4f1	55	39.091
ENSPKIG00000018202	-	75	34.756	ENSPKIG00000002670	-	55	34.756
ENSPKIG00000018202	-	79	39.823	ENSPKIG00000018168	znf236	66	39.823
ENSPKIG00000018202	-	76	35.329	ENSPKIG00000015951	-	64	35.329
ENSPKIG00000018202	-	62	35.780	ENSPKIG00000006616	-	57	35.780
ENSPKIG00000018202	-	74	37.288	ENSPKIG00000008355	-	69	37.647
ENSPKIG00000018202	-	81	32.692	ENSPKIG00000015492	prdm5	70	34.783
ENSPKIG00000018202	-	76	38.519	ENSPKIG00000006563	-	91	38.806
ENSPKIG00000018202	-	63	38.158	ENSPKIG00000007872	SNAI3	58	38.158
ENSPKIG00000018202	-	78	39.286	ENSPKIG00000012069	-	96	39.568
ENSPKIG00000018202	-	62	31.609	ENSPKIG00000006393	snai1a	62	36.538
ENSPKIG00000018202	-	60	36.220	ENSPKIG00000002254	SNAI2	58	36.220
ENSPKIG00000018202	-	73	35.802	ENSPKIG00000005164	-	56	32.143
ENSPKIG00000018202	-	75	36.792	ENSPKIG00000009111	-	83	36.792
ENSPKIG00000018202	-	74	39.450	ENSPKIG00000007643	gfi1b	51	32.237
ENSPKIG00000018202	-	81	40.698	ENSPKIG00000012290	-	100	40.984
ENSPKIG00000018202	-	79	34.211	ENSPKIG00000023946	znf341	62	34.211
ENSPKIG00000018202	-	80	30.058	ENSPKIG00000001492	-	83	30.682
ENSPKIG00000018202	-	60	36.842	ENSPKIG00000012153	-	50	36.842
ENSPKIG00000018202	-	73	35.119	ENSPKIG00000017781	-	64	39.535

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000018202	-	80	70.183	ENSG00000103495	MAZ	78	79.114	Homo_sapiens
ENSPKIG00000018202	-	80	70.183	ENSANAG00000036195	-	68	50.761	Aotus_nancymaae
ENSPKIG00000018202	-	73	68.786	ENSANAG00000037536	-	90	68.786	Aotus_nancymaae
ENSPKIG00000018202	-	80	70.183	ENSBTAG00000052323	MAZ	64	53.459	Bos_taurus
ENSPKIG00000018202	-	80	70.183	ENSCJAG00000007189	MAZ	66	50.761	Callithrix_jacchus
ENSPKIG00000018202	-	80	70.183	ENSCAFG00000016964	MAZ	77	50.761	Canis_familiaris
ENSPKIG00000018202	-	80	70.183	ENSCAFG00020017751	MAZ	64	53.459	Canis_lupus_dingo
ENSPKIG00000018202	-	80	70.183	ENSCHIG00000020711	MAZ	66	50.761	Capra_hircus
ENSPKIG00000018202	-	80	70.183	ENSCCAG00000037524	MAZ	66	50.761	Cebus_capucinus
ENSPKIG00000018202	-	80	70.183	ENSCATG00000033033	MAZ	66	50.761	Cercocebus_atys
ENSPKIG00000018202	-	80	70.183	ENSCSAG00000006110	MAZ	81	70.183	Chlorocebus_sabaeus
ENSPKIG00000018202	-	80	70.183	ENSCANG00000035162	MAZ	83	70.183	Colobus_angolensis_palliatus
ENSPKIG00000018202	-	80	70.183	ENSCGRG00001008879	Maz	66	50.761	Cricetulus_griseus_chok1gshd
ENSPKIG00000018202	-	80	69.856	ENSCGRG00000014850	-	99	69.856	Cricetulus_griseus_crigri
ENSPKIG00000018202	-	93	72.857	ENSCVAG00000015597	si:ch211-166g5.4	100	63.148	Cyprinodon_variegatus
ENSPKIG00000018202	-	92	79.848	ENSDARG00000063555	si:ch211-166g5.4	100	79.848	Danio_rerio
ENSPKIG00000018202	-	80	70.183	ENSEASG00005013172	MAZ	66	50.761	Equus_asinus_asinus
ENSPKIG00000018202	-	80	70.183	ENSECAG00000024341	MAZ	64	53.459	Equus_caballus
ENSPKIG00000018202	-	93	76.923	ENSELUG00000022514	si:ch211-166g5.4	81	87.013	Esox_lucius
ENSPKIG00000018202	-	92	80.755	ENSELUG00000024246	MAZ	98	68.016	Esox_lucius
ENSPKIG00000018202	-	80	70.183	ENSFCAG00000014146	MAZ	69	50.761	Felis_catus
ENSPKIG00000018202	-	76	49.763	ENSFDAG00000010852	-	99	51.675	Fukomys_damarensis
ENSPKIG00000018202	-	92	78.838	ENSFHEG00000000918	MAZ	97	78.838	Fundulus_heteroclitus
ENSPKIG00000018202	-	100	70.408	ENSGAFG00000000293	si:ch211-166g5.4	99	65.392	Gambusia_affinis
ENSPKIG00000018202	-	77	87.054	ENSGACG00000014840	maza	89	91.266	Gasterosteus_aculeatus
ENSPKIG00000018202	-	73	76.000	ENSGAGG00000008124	MAZ	82	71.628	Gopherus_agassizii
ENSPKIG00000018202	-	80	70.183	ENSHGLG00000018743	-	83	70.183	Heterocephalus_glaber_female
ENSPKIG00000018202	-	77	61.321	ENSHGLG00000011024	-	79	62.019	Heterocephalus_glaber_female
ENSPKIG00000018202	-	71	65.152	ENSHGLG00100017872	-	87	65.152	Heterocephalus_glaber_male
ENSPKIG00000018202	-	80	70.183	ENSSTOG00000027842	MAZ	83	70.183	Ictidomys_tridecemlineatus
ENSPKIG00000018202	-	80	70.183	ENSJJAG00000020922	-	83	70.183	Jaculus_jaculus
ENSPKIG00000018202	-	73	75.500	ENSLACG00000010161	MAZ	92	49.282	Latimeria_chalumnae
ENSPKIG00000018202	-	80	70.183	ENSMFAG00000040127	MAZ	83	70.183	Macaca_fascicularis
ENSPKIG00000018202	-	80	70.183	ENSMMUG00000019826	MAZ	76	50.761	Macaca_mulatta
ENSPKIG00000018202	-	80	70.183	ENSMNEG00000037329	MAZ	83	70.183	Macaca_nemestrina
ENSPKIG00000018202	-	59	81.579	ENSMLEG00000036147	-	77	79.618	Mandrillus_leucophaeus
ENSPKIG00000018202	-	96	80.597	ENSMAMG00000018743	-	94	79.705	Mastacembelus_armatus
ENSPKIG00000018202	-	81	69.058	ENSMAUG00000011903	Maz	68	50.254	Mesocricetus_auratus
ENSPKIG00000018202	-	80	70.183	ENSMICG00000030392	MAZ	66	50.761	Microcebus_murinus
ENSPKIG00000018202	-	80	70.183	ENSMOCG00000003611	Maz	66	50.761	Microtus_ochrogaster
ENSPKIG00000018202	-	80	70.183	ENSMUSG00000030678	Maz	66	50.508	Mus_musculus
ENSPKIG00000018202	-	80	70.183	MGP_PahariEiJ_G0013693	Maz	66	50.508	Mus_pahari
ENSPKIG00000018202	-	76	52.404	ENSMEUG00000009482	MAZ	66	40.909	Notamacropus_eugenii
ENSPKIG00000018202	-	80	70.183	ENSODEG00000014451	MAZ	83	70.183	Octodon_degus
ENSPKIG00000018202	-	62	78.616	ENSOANG00000004112	-	80	78.049	Ornithorhynchus_anatinus
ENSPKIG00000018202	-	80	70.183	ENSOARG00000005520	MAZ	99	49.618	Ovis_aries
ENSPKIG00000018202	-	73	74.346	ENSPPAG00000041571	-	76	70.588	Pan_paniscus
ENSPKIG00000018202	-	80	70.183	ENSPPRG00000016750	-	69	50.761	Panthera_pardus
ENSPKIG00000018202	-	80	58.257	ENSPPRG00000011596	-	82	59.174	Panthera_pardus
ENSPKIG00000018202	-	80	70.183	ENSPTRG00000007968	MAZ	66	50.761	Pan_troglodytes
ENSPKIG00000018202	-	80	70.183	ENSPANG00000016381	-	83	70.183	Papio_anubis
ENSPKIG00000018202	-	76	61.244	ENSPEMG00000008318	-	99	62.201	Peromyscus_maniculatus_bairdii
ENSPKIG00000018202	-	93	74.275	ENSPFOG00000005397	si:ch211-166g5.4	100	64.648	Poecilia_formosa
ENSPKIG00000018202	-	79	81.858	ENSPLAG00000017219	si:ch211-166g5.4	83	86.463	Poecilia_latipinna
ENSPKIG00000018202	-	80	80.870	ENSPMEG00000017552	si:ch211-166g5.4	85	85.408	Poecilia_mexicana
ENSPKIG00000018202	-	93	74.729	ENSPREG00000023113	si:ch211-166g5.4	100	63.796	Poecilia_reticulata
ENSPKIG00000018202	-	80	70.183	ENSPCOG00000022370	MAZ	64	53.145	Propithecus_coquereli
ENSPKIG00000018202	-	93	75.182	ENSPNAG00000004042	si:ch211-166g5.4	90	81.176	Pygocentrus_nattereri
ENSPKIG00000018202	-	80	70.183	ENSRBIG00000001823	MAZ	83	70.183	Rhinopithecus_bieti
ENSPKIG00000018202	-	80	70.183	ENSRROG00000026952	MAZ	83	70.183	Rhinopithecus_roxellana
ENSPKIG00000018202	-	80	70.183	ENSSBOG00000020791	-	83	70.183	Saimiri_boliviensis_boliviensis
ENSPKIG00000018202	-	93	84.291	ENSSFOG00015021699	si:ch211-166g5.4	76	87.023	Scleropages_formosus
ENSPKIG00000018202	-	73	76.000	ENSSPUG00000010618	MAZ	66	70.796	Sphenodon_punctatus
ENSPKIG00000018202	-	80	70.183	ENSSSCG00000025321	MAZ	69	50.761	Sus_scrofa
ENSPKIG00000018202	-	80	70.183	ENSTTRG00000005420	MAZ	79	51.053	Tursiops_truncatus
ENSPKIG00000018202	-	80	70.183	ENSUAMG00000004622	MAZ	83	70.183	Ursus_americanus
ENSPKIG00000018202	-	80	70.183	ENSVVUG00000026097	MAZ	83	70.183	Vulpes_vulpes
ENSPKIG00000018202	-	93	74.275	ENSXMAG00000023386	si:ch211-166g5.4	100	66.667	Xiphophorus_maculatus