EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000018308 (Gene tree)
Gene ID: 111835617
Gene Symbol: -
Alias: -
Full Name: SHANK associated RH domain interactor
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 12001 bases
Position: chrPGUA01000525.1:126092-138092
Accession: 111835617
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000041947	zf-RanBP	PF00641.18	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000022991	-	5937	-	ENSPKIP00000041947	474 (aa)	XP_023651887	UPI000CD6168B

Gene Model

Click here to download ENSPKIG00000018308's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki04217	Necroptosis	KEGG
pki04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000018308's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000018308	-	96	70.460	ENSPKIG00000006933	shrprbck1r	65	70.460

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000018308	-	90	62.615	ENSAPOG00000023352	sharpin	98	62.156	Acanthochromis_polyacanthus
ENSPKIG00000018308	-	96	61.134	ENSAPOG00000022737	shrprbck1r	65	61.134	Acanthochromis_polyacanthus
ENSPKIG00000018308	-	96	59.494	ENSACIG00000002184	shrprbck1r	100	56.468	Amphilophus_citrinellus
ENSPKIG00000018308	-	96	62.156	ENSAOCG00000002890	shrprbck1r	65	62.156	Amphiprion_ocellaris
ENSPKIG00000018308	-	90	62.269	ENSAOCG00000017464	sharpin	98	61.806	Amphiprion_ocellaris
ENSPKIG00000018308	-	96	60.297	ENSAPEG00000023274	shrprbck1r	65	60.297	Amphiprion_percula
ENSPKIG00000018308	-	90	62.269	ENSAPEG00000004049	sharpin	98	61.806	Amphiprion_percula
ENSPKIG00000018308	-	88	64.524	ENSATEG00000007832	sharpin	87	64.048	Anabas_testudineus
ENSPKIG00000018308	-	96	58.174	ENSATEG00000014561	shrprbck1r	65	58.599	Anabas_testudineus
ENSPKIG00000018308	-	96	59.831	ENSACLG00000022609	shrprbck1r	65	60.042	Astatotilapia_calliptera
ENSPKIG00000018308	-	68	50.424	ENSACLG00000020160	-	82	76.000	Astatotilapia_calliptera
ENSPKIG00000018308	-	81	57.468	ENSAMXG00000006229	sharpin	97	57.035	Astyanax_mexicanus
ENSPKIG00000018308	-	95	60.669	ENSAMXG00000021016	shrprbck1r	71	60.797	Astyanax_mexicanus
ENSPKIG00000018308	-	96	54.641	ENSCSEG00000011306	shrprbck1r	65	54.661	Cynoglossus_semilaevis
ENSPKIG00000018308	-	95	60.554	ENSCVAG00000007250	shrprbck1r	65	60.341	Cyprinodon_variegatus
ENSPKIG00000018308	-	90	58.469	ENSCVAG00000006586	sharpin	98	58.469	Cyprinodon_variegatus
ENSPKIG00000018308	-	99	60.825	ENSDARG00000059871	shrprbck1r	100	60.825	Danio_rerio
ENSPKIG00000018308	-	81	55.980	ENSDARG00000076995	sharpin	94	55.471	Danio_rerio
ENSPKIG00000018308	-	96	64.783	ENSELUG00000016022	shrprbck1r	65	64.348	Esox_lucius
ENSPKIG00000018308	-	90	57.737	ENSFHEG00000013564	sharpin	98	57.737	Fundulus_heteroclitus
ENSPKIG00000018308	-	82	62.385	ENSGMOG00000010123	sharpin	95	62.385	Gadus_morhua
ENSPKIG00000018308	-	87	46.651	ENSGAFG00000021405	sharpin	95	46.651	Gambusia_affinis
ENSPKIG00000018308	-	96	58.664	ENSGAFG00000009309	shrprbck1r	66	58.664	Gambusia_affinis
ENSPKIG00000018308	-	59	57.857	ENSGACG00000002544	shrprbck1r	50	55.749	Gasterosteus_aculeatus
ENSPKIG00000018308	-	96	59.831	ENSHBUG00000021933	shrprbck1r	65	60.254	Haplochromis_burtoni
ENSPKIG00000018308	-	88	60.095	ENSHCOG00000018847	sharpin	80	59.524	Hippocampus_comes
ENSPKIG00000018308	-	74	84.615	ENSIPUG00000011951	sharpin	95	84.615	Ictalurus_punctatus
ENSPKIG00000018308	-	91	60.268	ENSIPUG00000014247	shrprbck1r	65	57.384	Ictalurus_punctatus
ENSPKIG00000018308	-	87	60.839	ENSKMAG00000015204	sharpin	76	60.993	Kryptolebias_marmoratus
ENSPKIG00000018308	-	96	57.829	ENSKMAG00000015215	shrprbck1r	66	58.333	Kryptolebias_marmoratus
ENSPKIG00000018308	-	90	62.937	ENSLBEG00000016624	sharpin	98	62.937	Labrus_bergylta
ENSPKIG00000018308	-	96	59.746	ENSLBEG00000016876	shrprbck1r	65	60.593	Labrus_bergylta
ENSPKIG00000018308	-	88	49.180	ENSLACG00000010948	-	62	48.478	Latimeria_chalumnae
ENSPKIG00000018308	-	97	63.404	ENSLOCG00000008910	shrprbck1r	64	65.142	Lepisosteus_oculatus
ENSPKIG00000018308	-	75	64.516	ENSMAMG00000014645	sharpin	95	64.516	Mastacembelus_armatus
ENSPKIG00000018308	-	96	57.741	ENSMAMG00000022930	shrprbck1r	66	57.531	Mastacembelus_armatus
ENSPKIG00000018308	-	96	59.619	ENSMZEG00005021257	shrprbck1r	65	59.831	Maylandia_zebra
ENSPKIG00000018308	-	96	58.737	ENSMMOG00000003764	shrprbck1r	65	58.824	Mola_mola
ENSPKIG00000018308	-	74	65.909	ENSMMOG00000016788	sharpin	94	65.909	Mola_mola
ENSPKIG00000018308	-	89	59.226	ENSMALG00000008861	shrprbck1r	60	59.226	Monopterus_albus
ENSPKIG00000018308	-	54	65.476	ENSMALG00000020528	sharpin	95	64.516	Monopterus_albus
ENSPKIG00000018308	-	96	59.619	ENSNBRG00000002270	shrprbck1r	65	59.831	Neolamprologus_brichardi
ENSPKIG00000018308	-	68	52.778	ENSNBRG00000012382	sharpin	91	53.086	Neolamprologus_brichardi
ENSPKIG00000018308	-	96	59.831	ENSONIG00000014401	shrprbck1r	65	59.619	Oreochromis_niloticus
ENSPKIG00000018308	-	81	59.214	ENSONIG00000009626	-	96	59.214	Oreochromis_niloticus
ENSPKIG00000018308	-	96	58.562	ENSORLG00000007392	shrprbck1r	65	58.562	Oryzias_latipes
ENSPKIG00000018308	-	88	60.757	ENSORLG00000017281	sharpin	95	60.520	Oryzias_latipes
ENSPKIG00000018308	-	96	58.386	ENSORLG00020018619	shrprbck1r	65	58.351	Oryzias_latipes_hni
ENSPKIG00000018308	-	88	60.520	ENSORLG00020000801	sharpin	100	57.082	Oryzias_latipes_hni
ENSPKIG00000018308	-	96	57.962	ENSORLG00015018865	shrprbck1r	65	57.962	Oryzias_latipes_hsok
ENSPKIG00000018308	-	88	60.520	ENSORLG00015009860	sharpin	95	60.284	Oryzias_latipes_hsok
ENSPKIG00000018308	-	96	59.534	ENSOMEG00000012749	shrprbck1r	65	59.534	Oryzias_melastigma
ENSPKIG00000018308	-	74	76.000	ENSOMEG00000005729	sharpin	88	76.000	Oryzias_melastigma
ENSPKIG00000018308	-	96	56.009	ENSPMGG00000013254	shrprbck1r	64	56.009	Periophthalmus_magnuspinnatus
ENSPKIG00000018308	-	99	58.144	ENSPFOG00000004214	shrprbck1r	100	58.144	Poecilia_formosa
ENSPKIG00000018308	-	90	57.442	ENSPFOG00000015253	sharpin	98	57.442	Poecilia_formosa
ENSPKIG00000018308	-	90	57.674	ENSPLAG00000000423	sharpin	98	57.674	Poecilia_latipinna
ENSPKIG00000018308	-	95	59.362	ENSPLAG00000020523	shrprbck1r	65	59.362	Poecilia_latipinna
ENSPKIG00000018308	-	95	58.422	ENSPMEG00000006877	shrprbck1r	65	58.422	Poecilia_mexicana
ENSPKIG00000018308	-	75	51.695	ENSPMEG00000023030	sharpin	88	51.695	Poecilia_mexicana
ENSPKIG00000018308	-	90	57.506	ENSPREG00000009702	sharpin	99	57.506	Poecilia_reticulata
ENSPKIG00000018308	-	95	58.120	ENSPREG00000014689	shrprbck1r	64	58.120	Poecilia_reticulata
ENSPKIG00000018308	-	96	60.042	ENSPNYG00000022601	shrprbck1r	65	60.254	Pundamilia_nyererei
ENSPKIG00000018308	-	95	61.392	ENSPNAG00000007847	shrprbck1r	65	61.603	Pygocentrus_nattereri
ENSPKIG00000018308	-	80	55.867	ENSPNAG00000002911	sharpin	99	55.808	Pygocentrus_nattereri
ENSPKIG00000018308	-	93	60.083	ENSSFOG00015004028	sharpin	99	60.288	Scleropages_formosus
ENSPKIG00000018308	-	96	57.971	ENSSMAG00000018085	shrprbck1r	65	57.764	Scophthalmus_maximus
ENSPKIG00000018308	-	96	60.934	ENSSDUG00000002959	shrprbck1r	65	61.359	Seriola_dumerili
ENSPKIG00000018308	-	88	50.238	ENSSDUG00000019039	sharpin	96	50.238	Seriola_dumerili
ENSPKIG00000018308	-	96	60.510	ENSSLDG00000009026	shrprbck1r	65	60.934	Seriola_lalandi_dorsalis
ENSPKIG00000018308	-	96	61.053	ENSSPAG00000016097	shrprbck1r	67	61.053	Stegastes_partitus
ENSPKIG00000018308	-	67	61.739	ENSSPAG00000021807	sharpin	88	71.429	Stegastes_partitus
ENSPKIG00000018308	-	87	57.452	ENSTRUG00000011046	sharpin	95	57.452	Takifugu_rubripes
ENSPKIG00000018308	-	95	57.173	ENSTRUG00000006949	shrprbck1r	63	57.173	Takifugu_rubripes
ENSPKIG00000018308	-	81	61.069	ENSTNIG00000008521	sharpin	94	61.069	Tetraodon_nigroviridis
ENSPKIG00000018308	-	87	45.933	ENSXCOG00000015019	sharpin	96	45.933	Xiphophorus_couchianus
ENSPKIG00000018308	-	95	57.143	ENSXCOG00000006701	shrprbck1r	64	57.143	Xiphophorus_couchianus
ENSPKIG00000018308	-	90	58.102	ENSXMAG00000022076	sharpin	99	58.102	Xiphophorus_maculatus
ENSPKIG00000018308	-	95	57.143	ENSXMAG00000018972	shrprbck1r	64	57.143	Xiphophorus_maculatus