EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000018462 (Gene tree)
Gene ID: 111833205
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 17115 bases
Position: chrPGUA01000439.1:221245-238359
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000011470	PAM2	PF07145.15	4.6e-05	1	1
ENSPKIP00000011409	PAM2	PF07145.15	4.8e-05	1	1
ENSPKIP00000011360	PAM2	PF07145.15	0.00013	1	1
ENSPKIP00000011470	LsmAD	PF06741.13	4.9e-17	1	1
ENSPKIP00000011409	LsmAD	PF06741.13	5.3e-17	1	1
ENSPKIP00000011360	LsmAD	PF06741.13	5.3e-17	1	1
ENSPKIP00000011360	SM-ATX	PF14438.6	8.1e-20	1	1
ENSPKIP00000011470	SM-ATX	PF14438.6	8.4e-20	1	1
ENSPKIP00000011409	SM-ATX	PF14438.6	1.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000023414	-	2856	-	ENSPKIP00000011470	951 (aa)	-	-
ENSPKIT00000023301	-	6639	-	ENSPKIP00000011360	1036 (aa)	-	-
ENSPKIT00000023351	-	5757	-	ENSPKIP00000011409	1029 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000018462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000018462's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000018462	-	68	55.639	ENSPKIG00000023134	atxn2	69	55.639

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000018462	-	86	65.371	ENSG00000168488	ATXN2L	100	66.316	Homo_sapiens
ENSPKIG00000018462	-	99	64.019	ENSAPOG00000021412	-	96	63.761	Acanthochromis_polyacanthus
ENSPKIG00000018462	-	94	47.368	ENSACIG00000024435	atxn2l	69	67.681	Amphilophus_citrinellus
ENSPKIG00000018462	-	81	65.707	ENSACIG00000014731	-	99	57.778	Amphilophus_citrinellus
ENSPKIG00000018462	-	92	62.693	ENSAOCG00000002581	-	100	62.500	Amphiprion_ocellaris
ENSPKIG00000018462	-	99	64.436	ENSAPEG00000011038	-	97	64.238	Amphiprion_percula
ENSPKIG00000018462	-	99	63.671	ENSATEG00000019382	-	95	62.643	Anabas_testudineus
ENSPKIG00000018462	-	83	65.543	ENSACLG00000016900	atxn2l	91	67.293	Astatotilapia_calliptera
ENSPKIG00000018462	-	99	61.400	ENSACLG00000009975	-	95	61.815	Astatotilapia_calliptera
ENSPKIG00000018462	-	86	84.615	ENSAMXG00000003332	atxn2l	94	84.615	Astyanax_mexicanus
ENSPKIG00000018462	-	86	65.371	ENSCAFG00020017576	ATXN2L	78	67.164	Canis_lupus_dingo
ENSPKIG00000018462	-	84	62.454	ENSCPOG00000010521	ATXN2L	96	66.406	Cavia_porcellus
ENSPKIG00000018462	-	85	64.945	ENSCATG00000021354	ATXN2L	93	66.797	Cercocebus_atys
ENSPKIG00000018462	-	85	65.035	ENSCLAG00000016117	ATXN2L	96	66.016	Chinchilla_lanigera
ENSPKIG00000018462	-	87	55.944	ENSCANG00000043625	ATXN2L	97	57.196	Colobus_angolensis_palliatus
ENSPKIG00000018462	-	87	65.035	ENSCGRG00001017114	Atxn2l	80	66.421	Cricetulus_griseus_chok1gshd
ENSPKIG00000018462	-	78	64.576	ENSCGRG00000001500	Atxn2l	94	66.016	Cricetulus_griseus_crigri
ENSPKIG00000018462	-	59	59.259	ENSCSEG00000008530	-	96	58.464	Cynoglossus_semilaevis
ENSPKIG00000018462	-	99	61.501	ENSCVAG00000015825	-	97	60.612	Cyprinodon_variegatus
ENSPKIG00000018462	-	97	38.697	ENSEASG00005014992	ATXN2L	87	65.926	Equus_asinus_asinus
ENSPKIG00000018462	-	86	65.018	ENSECAG00000007301	ATXN2L	82	66.421	Equus_caballus
ENSPKIG00000018462	-	99	59.789	ENSELUG00000023740	atxn2l	98	58.784	Esox_lucius
ENSPKIG00000018462	-	85	60.266	ENSELUG00000022915	-	86	58.751	Esox_lucius
ENSPKIG00000018462	-	72	66.964	ENSGMOG00000000316	atxn2l	63	65.289	Gadus_morhua
ENSPKIG00000018462	-	97	52.888	ENSGMOG00000006016	-	63	56.467	Gadus_morhua
ENSPKIG00000018462	-	98	60.728	ENSGACG00000007446	-	97	60.325	Gasterosteus_aculeatus
ENSPKIG00000018462	-	99	38.672	ENSGAGG00000006078	ATXN2L	91	64.815	Gopherus_agassizii
ENSPKIG00000018462	-	98	44.626	ENSGGOG00000036669	-	87	56.827	Gorilla_gorilla
ENSPKIG00000018462	-	99	61.306	ENSHBUG00000007997	-	97	61.720	Haplochromis_burtoni
ENSPKIG00000018462	-	87	62.069	ENSHGLG00100000705	ATXN2L	95	66.790	Heterocephalus_glaber_male
ENSPKIG00000018462	-	83	70.031	ENSHCOG00000017587	-	100	70.213	Hippocampus_comes
ENSPKIG00000018462	-	98	63.033	ENSIPUG00000001761	atxn2l	95	61.712	Ictalurus_punctatus
ENSPKIG00000018462	-	70	64.286	ENSSTOG00000011807	ATXN2L	92	67.066	Ictidomys_tridecemlineatus
ENSPKIG00000018462	-	85	65.371	ENSJJAG00000005629	Atxn2l	93	66.406	Jaculus_jaculus
ENSPKIG00000018462	-	99	63.654	ENSKMAG00000021450	-	99	62.006	Kryptolebias_marmoratus
ENSPKIG00000018462	-	60	63.406	ENSLAFG00000018143	ATXN2L	91	63.780	Loxodonta_africana
ENSPKIG00000018462	-	99	61.400	ENSMZEG00005013869	-	95	61.815	Maylandia_zebra
ENSPKIG00000018462	-	65	66.292	ENSMZEG00005001258	atxn2l	92	67.293	Maylandia_zebra
ENSPKIG00000018462	-	99	43.368	ENSMOCG00000020882	Atxn2l	91	66.406	Microtus_ochrogaster
ENSPKIG00000018462	-	95	60.345	ENSMMOG00000001440	-	99	59.861	Mola_mola
ENSPKIG00000018462	-	99	42.896	ENSMODG00000015570	ATXN2L	86	66.296	Monodelphis_domestica
ENSPKIG00000018462	-	94	56.843	ENSMALG00000008430	-	50	55.263	Monopterus_albus
ENSPKIG00000018462	-	99	43.462	MGP_CAROLIEiJ_G0030450	Atxn2l	93	66.406	Mus_caroli
ENSPKIG00000018462	-	78	62.454	ENSMUSG00000032637	Atxn2l	94	66.406	Mus_musculus
ENSPKIG00000018462	-	99	43.703	MGP_PahariEiJ_G0013660	Atxn2l	93	66.406	Mus_pahari
ENSPKIG00000018462	-	78	62.454	MGP_SPRETEiJ_G0031564	Atxn2l	94	66.406	Mus_spretus
ENSPKIG00000018462	-	78	61.710	ENSNGAG00000021446	Atxn2l	94	65.625	Nannospalax_galili
ENSPKIG00000018462	-	95	59.448	ENSNBRG00000012039	-	55	63.853	Neolamprologus_brichardi
ENSPKIG00000018462	-	85	65.371	ENSNLEG00000011004	ATXN2L	93	66.790	Nomascus_leucogenys
ENSPKIG00000018462	-	78	50.000	ENSNLEG00000033414	-	85	49.808	Nomascus_leucogenys
ENSPKIG00000018462	-	78	61.514	ENSMEUG00000011098	ATXN2L	70	65.556	Notamacropus_eugenii
ENSPKIG00000018462	-	97	40.783	ENSOPRG00000002270	-	88	56.827	Ochotona_princeps
ENSPKIG00000018462	-	99	61.611	ENSONIG00000011478	-	97	62.108	Oreochromis_niloticus
ENSPKIG00000018462	-	85	62.454	ENSOCUG00000002677	ATXN2L	92	66.406	Oryctolagus_cuniculus
ENSPKIG00000018462	-	85	62.454	ENSOARG00000002503	ATXN2L	96	66.406	Ovis_aries
ENSPKIG00000018462	-	91	48.997	ENSPPAG00000036236	-	67	54.688	Pan_paniscus
ENSPKIG00000018462	-	85	64.576	ENSPPAG00000039107	ATXN2L	89	66.406	Pan_paniscus
ENSPKIG00000018462	-	69	65.480	ENSPANG00000018770	ATXN2L	89	65.934	Papio_anubis
ENSPKIG00000018462	-	87	60.068	ENSPSIG00000004866	ATXN2L	65	64.419	Pelodiscus_sinensis
ENSPKIG00000018462	-	73	68.876	ENSPMGG00000014821	-	79	75.655	Periophthalmus_magnuspinnatus
ENSPKIG00000018462	-	99	40.055	ENSPCIG00000025207	ATXN2L	86	66.296	Phascolarctos_cinereus
ENSPKIG00000018462	-	99	59.192	ENSPFOG00000005935	-	89	71.636	Poecilia_formosa
ENSPKIG00000018462	-	99	59.384	ENSPLAG00000017094	-	67	77.903	Poecilia_latipinna
ENSPKIG00000018462	-	56	60.902	ENSPPYG00000017765	-	52	60.517	Pongo_abelii
ENSPKIG00000018462	-	85	55.319	ENSPVAG00000003958	ATXN2L	80	56.296	Pteropus_vampyrus
ENSPKIG00000018462	-	99	61.400	ENSPNYG00000017058	-	95	61.815	Pundamilia_nyererei
ENSPKIG00000018462	-	74	65.909	ENSPNYG00000012482	atxn2l	71	66.920	Pundamilia_nyererei
ENSPKIG00000018462	-	98	62.713	ENSPNAG00000014538	atxn2l	98	63.238	Pygocentrus_nattereri
ENSPKIG00000018462	-	98	42.871	ENSRNOG00000018686	Atxn2l	80	66.790	Rattus_norvegicus
ENSPKIG00000018462	-	73	68.571	ENSRBIG00000036712	ATXN2L	82	68.145	Rhinopithecus_bieti
ENSPKIG00000018462	-	85	64.576	ENSSBOG00000025782	ATXN2L	97	66.406	Saimiri_boliviensis_boliviensis
ENSPKIG00000018462	-	99	39.276	ENSSHAG00000012015	ATXN2L	93	65.891	Sarcophilus_harrisii
ENSPKIG00000018462	-	94	73.398	ENSSFOG00015021588	-	99	74.050	Scleropages_formosus
ENSPKIG00000018462	-	99	61.240	ENSSFOG00015001018	atxn2l	85	74.671	Scleropages_formosus
ENSPKIG00000018462	-	82	53.874	ENSSMAG00000016365	atxn2l	90	65.734	Scophthalmus_maximus
ENSPKIG00000018462	-	99	64.402	ENSSDUG00000023014	-	97	64.655	Seriola_dumerili
ENSPKIG00000018462	-	86	74.340	ENSSLDG00000017701	-	98	74.157	Seriola_lalandi_dorsalis
ENSPKIG00000018462	-	89	62.342	ENSSSCG00000021845	ATXN2L	82	66.790	Sus_scrofa
ENSPKIG00000018462	-	84	53.357	ENSUMAG00000009437	ATXN2L	91	66.790	Ursus_maritimus
ENSPKIG00000018462	-	88	61.513	ENSVVUG00000024239	ATXN2L	91	66.406	Vulpes_vulpes
ENSPKIG00000018462	-	96	50.739	ENSXETG00000014990	atxn2l	63	61.798	Xenopus_tropicalis
ENSPKIG00000018462	-	80	60.911	ENSXCOG00000001128	-	80	77.043	Xiphophorus_couchianus
ENSPKIG00000018462	-	99	59.252	ENSXMAG00000010133	-	97	59.351	Xiphophorus_maculatus