EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000018463 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 7592 bases
Position: chrPGUA01000078.1:2047642-2055233
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000011438	RRM_1	PF00076.22	6.4e-32	1	2
ENSPKIP00000011438	RRM_1	PF00076.22	6.4e-32	2	2
ENSPKIP00000011588	RRM_1	PF00076.22	1.1e-31	1	2
ENSPKIP00000011588	RRM_1	PF00076.22	1.1e-31	2	2
ENSPKIP00000011551	RRM_1	PF00076.22	1.7e-31	1	2
ENSPKIP00000011551	RRM_1	PF00076.22	1.7e-31	2	2
ENSPKIP00000011506	RRM_1	PF00076.22	4.9e-31	1	2
ENSPKIP00000011506	RRM_1	PF00076.22	4.9e-31	2	2
ENSPKIP00000011598	RRM_1	PF00076.22	2.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000023496	-	1089	-	ENSPKIP00000011551	362 (aa)	-	-
ENSPKIT00000023450	-	1092	-	ENSPKIP00000011506	363 (aa)	-	-
ENSPKIT00000023381	-	798	-	ENSPKIP00000011438	265 (aa)	-	-
ENSPKIT00000023544	-	306	-	ENSPKIP00000011598	101 (aa)	-	-
ENSPKIT00000023534	-	966	-	ENSPKIP00000011588	321 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000018463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000018463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000018463	-	65	46.479	ENSPKIG00000012857	srsf1b	93	41.935
ENSPKIG00000018463	-	66	73.134	ENSPKIG00000002054	srsf5a	97	54.698
ENSPKIG00000018463	-	83	76.190	ENSPKIG00000015703	-	98	79.412
ENSPKIG00000018463	-	82	41.860	ENSPKIG00000004949	srsf3a	60	41.071
ENSPKIG00000018463	-	70	31.646	ENSPKIG00000024430	CIRBP	87	34.579
ENSPKIG00000018463	-	77	98.718	ENSPKIG00000015603	-	88	94.309
ENSPKIG00000018463	-	65	46.479	ENSPKIG00000007204	srsf1a	94	42.570
ENSPKIG00000018463	-	69	41.333	ENSPKIG00000023787	srsf9	80	37.555
ENSPKIG00000018463	-	69	41.096	ENSPKIG00000008209	-	83	33.893
ENSPKIG00000018463	-	66	32.000	ENSPKIG00000010561	cirbpa	59	36.364
ENSPKIG00000018463	-	74	45.570	ENSPKIG00000017425	srsf7b	80	31.933
ENSPKIG00000018463	-	69	32.394	ENSPKIG00000023807	RALYL	72	32.394
ENSPKIG00000018463	-	74	45.570	ENSPKIG00000022669	SRSF7	90	35.294
ENSPKIG00000018463	-	68	43.243	ENSPKIG00000024851	SRSF9	74	39.423
ENSPKIG00000018463	-	83	41.379	ENSPKIG00000001408	-	61	40.196

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000018463	-	83	89.286	ENSG00000124193	SRSF6	100	63.143	Homo_sapiens
ENSPKIG00000018463	-	77	94.872	ENSAPOG00000016635	-	84	88.971	Acanthochromis_polyacanthus
ENSPKIG00000018463	-	67	67.027	ENSAMEG00000003710	SRSF6	100	58.166	Ailuropoda_melanoleuca
ENSPKIG00000018463	-	87	86.364	ENSACIG00000020091	-	95	82.812	Amphilophus_citrinellus
ENSPKIG00000018463	-	70	94.366	ENSACIG00000023658	-	90	75.850	Amphilophus_citrinellus
ENSPKIG00000018463	-	86	82.609	ENSAOCG00000004309	-	97	67.456	Amphiprion_ocellaris
ENSPKIG00000018463	-	77	94.872	ENSAOCG00000019438	-	93	82.075	Amphiprion_ocellaris
ENSPKIG00000018463	-	83	86.905	ENSAPEG00000020746	-	97	68.978	Amphiprion_percula
ENSPKIG00000018463	-	77	94.872	ENSAPEG00000013086	-	91	94.444	Amphiprion_percula
ENSPKIG00000018463	-	91	81.522	ENSATEG00000007255	-	93	72.800	Anabas_testudineus
ENSPKIG00000018463	-	53	85.811	ENSAPLG00000014472	SRSF6	92	65.595	Anas_platyrhynchos
ENSPKIG00000018463	-	77	92.308	ENSACAG00000002061	SRSF6	89	69.620	Anolis_carolinensis
ENSPKIG00000018463	-	83	89.286	ENSANAG00000024080	SRSF6	100	63.143	Aotus_nancymaae
ENSPKIG00000018463	-	72	90.411	ENSACLG00000024373	-	91	86.047	Astatotilapia_calliptera
ENSPKIG00000018463	-	76	94.805	ENSAMXG00000042692	-	96	87.407	Astyanax_mexicanus
ENSPKIG00000018463	-	76	93.506	ENSAMXG00000003101	-	91	75.806	Astyanax_mexicanus
ENSPKIG00000018463	-	83	90.476	ENSBTAG00000008527	SRSF6	98	62.879	Bos_taurus
ENSPKIG00000018463	-	83	89.286	ENSCJAG00000048403	SRSF6	98	72.222	Callithrix_jacchus
ENSPKIG00000018463	-	83	90.476	ENSCAFG00000009289	SRSF6	100	67.049	Canis_familiaris
ENSPKIG00000018463	-	83	90.476	ENSCAFG00020013559	SRSF6	100	67.049	Canis_lupus_dingo
ENSPKIG00000018463	-	77	91.026	ENSCHIG00000009148	-	100	66.286	Capra_hircus
ENSPKIG00000018463	-	83	90.476	ENSCHIG00000015890	-	100	66.857	Capra_hircus
ENSPKIG00000018463	-	67	65.169	ENSTSYG00000026476	SRSF6	91	54.799	Carlito_syrichta
ENSPKIG00000018463	-	83	89.286	ENSCPOG00000011761	SRSF6	98	62.121	Cavia_porcellus
ENSPKIG00000018463	-	83	89.286	ENSCCAG00000026018	-	100	66.952	Cebus_capucinus
ENSPKIG00000018463	-	87	70.000	ENSCCAG00000018540	-	91	61.616	Cebus_capucinus
ENSPKIG00000018463	-	83	89.286	ENSCATG00000030794	SRSF6	100	66.092	Cercocebus_atys
ENSPKIG00000018463	-	83	89.286	ENSCLAG00000010247	SRSF6	98	62.121	Chinchilla_lanigera
ENSPKIG00000018463	-	77	92.308	ENSCSAG00000014022	SRSF6	100	66.092	Chlorocebus_sabaeus
ENSPKIG00000018463	-	77	94.872	ENSCPBG00000018200	SRSF6	100	70.000	Chrysemys_picta_bellii
ENSPKIG00000018463	-	77	92.308	ENSCANG00000037774	-	100	65.805	Colobus_angolensis_palliatus
ENSPKIG00000018463	-	67	65.169	ENSCANG00000042529	-	100	54.467	Colobus_angolensis_palliatus
ENSPKIG00000018463	-	83	89.286	ENSCGRG00001022339	Srsf6	98	62.121	Cricetulus_griseus_chok1gshd
ENSPKIG00000018463	-	54	68.812	ENSCSEG00000019782	SRSF6	85	70.297	Cynoglossus_semilaevis
ENSPKIG00000018463	-	77	94.872	ENSCSEG00000019778	SRSF6	90	89.256	Cynoglossus_semilaevis
ENSPKIG00000018463	-	77	92.308	ENSCVAG00000001863	SRSF6	95	91.057	Cyprinodon_variegatus
ENSPKIG00000018463	-	76	93.506	ENSDARG00000016783	srsf6b	100	86.316	Danio_rerio
ENSPKIG00000018463	-	80	79.012	ENSDARG00000013729	srsf6a	93	72.485	Danio_rerio
ENSPKIG00000018463	-	77	92.308	ENSDNOG00000008410	SRSF6	100	66.572	Dasypus_novemcinctus
ENSPKIG00000018463	-	83	89.286	ENSDORG00000028378	Srsf6	98	62.121	Dipodomys_ordii
ENSPKIG00000018463	-	77	87.179	ENSETEG00000006221	SRSF6	100	65.330	Echinops_telfairi
ENSPKIG00000018463	-	77	93.590	ENSEASG00005023429	SRSF6	100	67.335	Equus_asinus_asinus
ENSPKIG00000018463	-	77	93.590	ENSECAG00000023932	SRSF6	100	67.335	Equus_caballus
ENSPKIG00000018463	-	81	90.244	ENSELUG00000013506	SRSF6	96	81.991	Esox_lucius
ENSPKIG00000018463	-	90	90.217	ENSELUG00000024182	SRSF6	92	96.296	Esox_lucius
ENSPKIG00000018463	-	77	93.590	ENSFCAG00000032814	SRSF6	100	67.049	Felis_catus
ENSPKIG00000018463	-	67	65.169	ENSFDAG00000012191	SRSF6	86	57.357	Fukomys_damarensis
ENSPKIG00000018463	-	86	91.209	ENSFHEG00000023065	srsf6a	91	94.444	Fundulus_heteroclitus
ENSPKIG00000018463	-	75	89.474	ENSGMOG00000014458	srsf6a	94	79.464	Gadus_morhua
ENSPKIG00000018463	-	99	69.524	ENSGMOG00000006105	srsf6a	94	62.057	Gadus_morhua
ENSPKIG00000018463	-	83	91.667	ENSGALG00000000990	SRSF6	100	67.989	Gallus_gallus
ENSPKIG00000018463	-	78	94.937	ENSGAFG00000019088	-	72	89.600	Gambusia_affinis
ENSPKIG00000018463	-	81	90.244	ENSGACG00000006084	srsf6a	96	79.221	Gasterosteus_aculeatus
ENSPKIG00000018463	-	77	94.872	ENSGAGG00000003238	SRSF6	100	70.000	Gopherus_agassizii
ENSPKIG00000018463	-	83	89.286	ENSGGOG00000009808	SRSF6	100	63.143	Gorilla_gorilla
ENSPKIG00000018463	-	75	90.789	ENSHBUG00000006386	-	94	68.471	Haplochromis_burtoni
ENSPKIG00000018463	-	83	89.286	ENSHGLG00000007348	SRSF6	98	62.121	Heterocephalus_glaber_female
ENSPKIG00000018463	-	91	65.957	ENSHGLG00000007701	-	92	60.667	Heterocephalus_glaber_female
ENSPKIG00000018463	-	67	65.169	ENSHGLG00100005043	SRSF6	89	56.105	Heterocephalus_glaber_male
ENSPKIG00000018463	-	83	88.202	ENSHCOG00000002740	srsf6a	92	75.510	Hippocampus_comes
ENSPKIG00000018463	-	59	93.333	ENSIPUG00000016856	SRSF6	92	72.845	Ictalurus_punctatus
ENSPKIG00000018463	-	77	94.872	ENSIPUG00000004776	-	90	82.123	Ictalurus_punctatus
ENSPKIG00000018463	-	83	89.286	ENSSTOG00000010866	SRSF6	93	67.391	Ictidomys_tridecemlineatus
ENSPKIG00000018463	-	100	66.563	ENSKMAG00000011934	srsf6a	91	81.928	Kryptolebias_marmoratus
ENSPKIG00000018463	-	77	96.154	ENSLBEG00000007356	srsf6a	94	79.060	Labrus_bergylta
ENSPKIG00000018463	-	89	72.917	ENSLACG00000009389	-	63	63.975	Latimeria_chalumnae
ENSPKIG00000018463	-	83	94.048	ENSLACG00000005466	SRSF6	89	71.521	Latimeria_chalumnae
ENSPKIG00000018463	-	75	88.158	ENSLOCG00000004202	-	65	58.204	Lepisosteus_oculatus
ENSPKIG00000018463	-	83	89.286	ENSMFAG00000036925	SRSF6	100	66.092	Macaca_fascicularis
ENSPKIG00000018463	-	83	89.286	ENSMMUG00000006742	SRSF6	100	66.092	Macaca_mulatta
ENSPKIG00000018463	-	77	92.308	ENSMNEG00000038270	-	90	68.254	Macaca_nemestrina
ENSPKIG00000018463	-	83	89.286	ENSMNEG00000027392	-	100	66.092	Macaca_nemestrina
ENSPKIG00000018463	-	83	89.286	ENSMAMG00000023477	-	90	89.286	Mastacembelus_armatus
ENSPKIG00000018463	-	85	88.108	ENSMAMG00000017161	srsf6a	94	76.923	Mastacembelus_armatus
ENSPKIG00000018463	-	77	91.026	ENSMZEG00005020658	-	95	69.697	Maylandia_zebra
ENSPKIG00000018463	-	75	90.789	ENSMZEG00005008032	-	94	67.192	Maylandia_zebra
ENSPKIG00000018463	-	83	89.286	ENSMAUG00000019086	-	98	62.121	Mesocricetus_auratus
ENSPKIG00000018463	-	83	89.286	ENSMICG00000008537	SRSF6	100	63.248	Microcebus_murinus
ENSPKIG00000018463	-	77	96.154	ENSMMOG00000015241	-	83	93.258	Mola_mola
ENSPKIG00000018463	-	77	94.872	ENSMODG00000003107	SRSF6	93	68.731	Monodelphis_domestica
ENSPKIG00000018463	-	80	77.778	ENSMALG00000003702	srsf6a	93	66.667	Monopterus_albus
ENSPKIG00000018463	-	83	89.286	MGP_CAROLIEiJ_G0024606	Srsf6	98	62.121	Mus_caroli
ENSPKIG00000018463	-	83	89.286	ENSMUSG00000016921	Srsf6	98	62.121	Mus_musculus
ENSPKIG00000018463	-	83	89.286	MGP_PahariEiJ_G0026050	Srsf6	98	62.121	Mus_pahari
ENSPKIG00000018463	-	83	89.286	MGP_SPRETEiJ_G0025528	Srsf6	98	62.121	Mus_spretus
ENSPKIG00000018463	-	77	93.590	ENSMPUG00000017692	SRSF6	100	70.990	Mustela_putorius_furo
ENSPKIG00000018463	-	67	63.587	ENSMLUG00000016618	SRSF6	90	52.478	Myotis_lucifugus
ENSPKIG00000018463	-	83	89.286	ENSNGAG00000017560	Srsf6	93	69.182	Nannospalax_galili
ENSPKIG00000018463	-	77	94.872	ENSNBRG00000001846	-	100	77.067	Neolamprologus_brichardi
ENSPKIG00000018463	-	75	90.789	ENSNBRG00000014709	-	94	68.153	Neolamprologus_brichardi
ENSPKIG00000018463	-	83	89.286	ENSNLEG00000006524	SRSF6	100	63.143	Nomascus_leucogenys
ENSPKIG00000018463	-	77	94.872	ENSMEUG00000014615	SRSF6	98	72.277	Notamacropus_eugenii
ENSPKIG00000018463	-	83	89.286	ENSODEG00000016510	-	98	62.121	Octodon_degus
ENSPKIG00000018463	-	84	87.978	ENSONIG00000001925	-	97	72.622	Oreochromis_niloticus
ENSPKIG00000018463	-	80	88.889	ENSONIG00000020247	-	95	69.912	Oreochromis_niloticus
ENSPKIG00000018463	-	92	40.000	ENSOCUG00000023999	-	97	51.793	Oryctolagus_cuniculus
ENSPKIG00000018463	-	67	66.495	ENSOCUG00000009785	-	99	60.000	Oryctolagus_cuniculus
ENSPKIG00000018463	-	62	90.476	ENSORLG00000003530	srsf6a	92	70.482	Oryzias_latipes
ENSPKIG00000018463	-	77	93.590	ENSORLG00020017506	srsf6a	91	74.510	Oryzias_latipes_hni
ENSPKIG00000018463	-	62	90.476	ENSORLG00015009410	srsf6a	92	70.181	Oryzias_latipes_hsok
ENSPKIG00000018463	-	62	87.302	ENSOMEG00000006001	srsf6a	90	71.865	Oryzias_melastigma
ENSPKIG00000018463	-	77	92.308	ENSOGAG00000014468	SRSF6	100	62.678	Otolemur_garnettii
ENSPKIG00000018463	-	74	89.333	ENSOARG00000003117	SRSF6	100	64.756	Ovis_aries
ENSPKIG00000018463	-	77	91.026	ENSPPAG00000034327	-	100	62.857	Pan_paniscus
ENSPKIG00000018463	-	77	84.615	ENSPPAG00000043131	-	98	62.662	Pan_paniscus
ENSPKIG00000018463	-	77	93.590	ENSPPRG00000008917	SRSF6	100	67.049	Panthera_pardus
ENSPKIG00000018463	-	89	76.042	ENSPTIG00000021305	-	73	59.259	Panthera_tigris_altaica
ENSPKIG00000018463	-	83	89.286	ENSPTRG00000044686	-	100	63.143	Pan_troglodytes
ENSPKIG00000018463	-	77	84.615	ENSPTRG00000046274	-	98	62.662	Pan_troglodytes
ENSPKIG00000018463	-	83	89.286	ENSPANG00000035224	SRSF6	100	66.092	Papio_anubis
ENSPKIG00000018463	-	86	87.500	ENSPMGG00000014963	srsf6a	91	75.081	Periophthalmus_magnuspinnatus
ENSPKIG00000018463	-	89	76.042	ENSPCIG00000022430	-	70	63.483	Phascolarctos_cinereus
ENSPKIG00000018463	-	83	91.667	ENSPCIG00000003820	SRSF6	93	68.731	Phascolarctos_cinereus
ENSPKIG00000018463	-	86	93.103	ENSPFOG00000006437	srsf6a	94	76.923	Poecilia_formosa
ENSPKIG00000018463	-	78	94.937	ENSPLAG00000009243	srsf6a	93	89.247	Poecilia_latipinna
ENSPKIG00000018463	-	86	88.043	ENSPMEG00000006042	SRSF6	94	78.279	Poecilia_mexicana
ENSPKIG00000018463	-	78	94.937	ENSPREG00000001040	srsf6a	87	90.769	Poecilia_reticulata
ENSPKIG00000018463	-	77	92.308	ENSPPYG00000011019	SRSF6	100	63.143	Pongo_abelii
ENSPKIG00000018463	-	77	93.590	ENSPCAG00000010954	SRSF6	95	67.188	Procavia_capensis
ENSPKIG00000018463	-	83	89.286	ENSPCOG00000026364	SRSF6	100	67.045	Propithecus_coquereli
ENSPKIG00000018463	-	77	96.154	ENSPVAG00000015232	SRSF6	100	67.429	Pteropus_vampyrus
ENSPKIG00000018463	-	77	94.872	ENSPNYG00000011272	-	90	79.498	Pundamilia_nyererei
ENSPKIG00000018463	-	75	90.789	ENSPNYG00000004944	-	94	68.153	Pundamilia_nyererei
ENSPKIG00000018463	-	81	95.122	ENSPNAG00000023179	-	94	90.984	Pygocentrus_nattereri
ENSPKIG00000018463	-	77	92.308	ENSRNOG00000006380	Srsf6	91	68.889	Rattus_norvegicus
ENSPKIG00000018463	-	79	92.500	ENSRBIG00000041414	SRSF6	92	66.978	Rhinopithecus_bieti
ENSPKIG00000018463	-	83	89.286	ENSRROG00000029989	SRSF6	100	66.379	Rhinopithecus_roxellana
ENSPKIG00000018463	-	80	76.543	ENSSBOG00000034078	-	89	59.609	Saimiri_boliviensis_boliviensis
ENSPKIG00000018463	-	83	89.286	ENSSBOG00000033708	-	100	63.143	Saimiri_boliviensis_boliviensis
ENSPKIG00000018463	-	77	94.872	ENSSHAG00000012805	SRSF6	93	68.731	Sarcophilus_harrisii
ENSPKIG00000018463	-	76	98.701	ENSSFOG00015015169	SRSF6	93	79.322	Scleropages_formosus
ENSPKIG00000018463	-	93	79.827	ENSSFOG00015019681	-	94	79.091	Scleropages_formosus
ENSPKIG00000018463	-	79	91.250	ENSSMAG00000014861	-	94	66.929	Scophthalmus_maximus
ENSPKIG00000018463	-	75	89.474	ENSSMAG00000017447	-	89	67.224	Scophthalmus_maximus
ENSPKIG00000018463	-	65	69.583	ENSSMAG00000014819	-	78	74.490	Scophthalmus_maximus
ENSPKIG00000018463	-	83	89.286	ENSSDUG00000011036	-	91	89.286	Seriola_dumerili
ENSPKIG00000018463	-	77	94.872	ENSSDUG00000016097	srsf6a	94	77.328	Seriola_dumerili
ENSPKIG00000018463	-	83	89.286	ENSSLDG00000014858	-	91	89.286	Seriola_lalandi_dorsalis
ENSPKIG00000018463	-	77	94.872	ENSSLDG00000022841	srsf6a	100	76.075	Seriola_lalandi_dorsalis
ENSPKIG00000018463	-	83	91.667	ENSSPUG00000004967	SRSF6	100	69.540	Sphenodon_punctatus
ENSPKIG00000018463	-	83	86.905	ENSSPAG00000021913	-	88	86.905	Stegastes_partitus
ENSPKIG00000018463	-	85	88.108	ENSSPAG00000002362	srsf6a	87	91.489	Stegastes_partitus
ENSPKIG00000018463	-	77	93.590	ENSSSCG00000007362	SRSF6	96	70.990	Sus_scrofa
ENSPKIG00000018463	-	77	94.872	ENSTGUG00000003455	SRSF6	100	68.267	Taeniopygia_guttata
ENSPKIG00000018463	-	84	88.235	ENSTRUG00000021397	-	87	93.750	Takifugu_rubripes
ENSPKIG00000018463	-	77	94.872	ENSTNIG00000001692	srsf6a	94	74.107	Tetraodon_nigroviridis
ENSPKIG00000018463	-	55	77.483	ENSTBEG00000013448	SRSF6	99	56.329	Tupaia_belangeri
ENSPKIG00000018463	-	83	90.476	ENSUAMG00000003559	SRSF6	100	67.049	Ursus_americanus
ENSPKIG00000018463	-	50	96.154	ENSVPAG00000003016	SRSF6	73	92.593	Vicugna_pacos
ENSPKIG00000018463	-	80	61.728	ENSVVUG00000019276	-	98	44.203	Vulpes_vulpes
ENSPKIG00000018463	-	80	93.827	ENSXETG00000025503	srsf6	56	70.462	Xenopus_tropicalis
ENSPKIG00000018463	-	77	96.154	ENSXMAG00000021849	srsf6a	91	92.593	Xiphophorus_maculatus