EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000018469 (Gene tree)
Gene ID: 111848551
Gene Symbol: -
Alias: -
Full Name: probable global transcription activator SNF2L2
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 42524 bases
Position: chrPGUA01000181.1:141350-183873
Accession: 111848551
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000011495	BRK	PF07533.16	3e-17	1	1
ENSPKIP00000011419	BRK	PF07533.16	3.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000023361	-	7945	-	ENSPKIP00000011419	1561 (aa)	XP_023676416	UPI000CD5E712
ENSPKIT00000023439	-	4566	-	ENSPKIP00000011495	1521 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000018469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000018469's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000018469	-	97	70.625	ENSPKIG00000010087	-	100	71.762
ENSPKIG00000018469	-	95	73.740	ENSPKIG00000007770	SMARCA4	100	72.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000018469	-	100	82.390	ENSG00000080503	SMARCA2	99	98.000	Homo_sapiens
ENSPKIG00000018469	-	100	84.310	ENSAPOG00000002641	SMARCA2	100	85.116	Acanthochromis_polyacanthus
ENSPKIG00000018469	-	82	87.031	ENSAMEG00000012325	SMARCA2	100	87.480	Ailuropoda_melanoleuca
ENSPKIG00000018469	-	100	82.551	ENSACIG00000015607	SMARCA2	100	83.397	Amphilophus_citrinellus
ENSPKIG00000018469	-	100	84.015	ENSAOCG00000009647	-	100	84.456	Amphiprion_ocellaris
ENSPKIG00000018469	-	100	84.058	ENSAPEG00000007646	SMARCA2	100	84.562	Amphiprion_percula
ENSPKIG00000018469	-	99	84.920	ENSATEG00000006916	SMARCA2	99	85.352	Anabas_testudineus
ENSPKIG00000018469	-	89	81.637	ENSAPLG00000013873	SMARCA2	93	81.728	Anas_platyrhynchos
ENSPKIG00000018469	-	100	83.439	ENSACAG00000002423	SMARCA2	100	83.631	Anolis_carolinensis
ENSPKIG00000018469	-	100	82.548	ENSANAG00000026498	SMARCA2	100	82.941	Aotus_nancymaae
ENSPKIG00000018469	-	100	84.492	ENSACLG00000004248	SMARCA2	100	85.264	Astatotilapia_calliptera
ENSPKIG00000018469	-	99	87.484	ENSAMXG00000012404	smarca2	100	87.287	Astyanax_mexicanus
ENSPKIG00000018469	-	100	83.483	ENSBTAG00000007494	SMARCA2	100	83.815	Bos_taurus
ENSPKIG00000018469	-	100	82.446	ENSCJAG00000010710	SMARCA2	99	84.011	Callithrix_jacchus
ENSPKIG00000018469	-	100	83.430	ENSCAFG00000002013	SMARCA2	100	83.761	Canis_familiaris
ENSPKIG00000018469	-	78	87.815	ENSCAFG00020026802	SMARCA2	96	87.899	Canis_lupus_dingo
ENSPKIG00000018469	-	100	83.483	ENSCHIG00000025863	SMARCA2	100	83.815	Capra_hircus
ENSPKIG00000018469	-	99	82.181	ENSTSYG00000003858	SMARCA2	100	81.767	Carlito_syrichta
ENSPKIG00000018469	-	97	79.908	ENSCAPG00000002890	SMARCA2	100	79.846	Cavia_aperea
ENSPKIG00000018469	-	97	82.411	ENSCPOG00000005475	SMARCA2	100	82.664	Cavia_porcellus
ENSPKIG00000018469	-	100	82.559	ENSCCAG00000030636	SMARCA2	100	82.952	Cebus_capucinus
ENSPKIG00000018469	-	100	82.420	ENSCATG00000031470	SMARCA2	100	82.941	Cercocebus_atys
ENSPKIG00000018469	-	100	82.338	ENSCLAG00000014484	SMARCA2	100	83.006	Chinchilla_lanigera
ENSPKIG00000018469	-	94	84.311	ENSCSAG00000008650	SMARCA2	99	84.526	Chlorocebus_sabaeus
ENSPKIG00000018469	-	83	83.205	ENSCHOG00000004316	SMARCA2	86	83.036	Choloepus_hoffmanni
ENSPKIG00000018469	-	100	83.651	ENSCPBG00000025463	SMARCA2	100	84.415	Chrysemys_picta_bellii
ENSPKIG00000018469	-	97	82.723	ENSCANG00000039597	SMARCA2	100	83.174	Colobus_angolensis_palliatus
ENSPKIG00000018469	-	97	76.822	ENSCGRG00001002323	Smarca2	100	77.430	Cricetulus_griseus_chok1gshd
ENSPKIG00000018469	-	98	80.610	ENSCSEG00000019311	SMARCA2	99	80.759	Cynoglossus_semilaevis
ENSPKIG00000018469	-	84	81.695	ENSCVAG00000016571	SMARCA2	98	82.007	Cyprinodon_variegatus
ENSPKIG00000018469	-	100	86.840	ENSDARG00000008904	smarca2	100	86.968	Danio_rerio
ENSPKIG00000018469	-	100	81.697	ENSDNOG00000006402	SMARCA2	100	82.848	Dasypus_novemcinctus
ENSPKIG00000018469	-	97	82.507	ENSDORG00000014832	Smarca2	100	82.995	Dipodomys_ordii
ENSPKIG00000018469	-	77	61.457	FBgn0000212	brm	93	54.509	Drosophila_melanogaster
ENSPKIG00000018469	-	94	70.685	ENSEBUG00000011442	-	97	70.285	Eptatretus_burgeri
ENSPKIG00000018469	-	86	61.801	ENSEBUG00000002449	-	98	62.000	Eptatretus_burgeri
ENSPKIG00000018469	-	100	83.430	ENSEASG00005010312	SMARCA2	100	83.890	Equus_asinus_asinus
ENSPKIG00000018469	-	63	91.176	ENSEEUG00000015540	-	70	84.722	Erinaceus_europaeus
ENSPKIG00000018469	-	95	84.074	ENSELUG00000010318	smarca2	99	82.691	Esox_lucius
ENSPKIG00000018469	-	100	83.130	ENSFCAG00000001568	SMARCA2	100	83.761	Felis_catus
ENSPKIG00000018469	-	100	83.471	ENSFALG00000010416	SMARCA2	100	85.479	Ficedula_albicollis
ENSPKIG00000018469	-	97	81.479	ENSFDAG00000010502	SMARCA2	100	80.872	Fukomys_damarensis
ENSPKIG00000018469	-	100	83.038	ENSFHEG00000021250	SMARCA2	100	83.583	Fundulus_heteroclitus
ENSPKIG00000018469	-	99	80.000	ENSGMOG00000014229	SMARCA2	100	80.333	Gadus_morhua
ENSPKIG00000018469	-	100	83.450	ENSGALG00000010164	SMARCA2	100	84.150	Gallus_gallus
ENSPKIG00000018469	-	95	78.133	ENSGAFG00000001164	SMARCA2	96	77.955	Gambusia_affinis
ENSPKIG00000018469	-	99	82.844	ENSGACG00000014488	SMARCA2	100	82.911	Gasterosteus_aculeatus
ENSPKIG00000018469	-	100	83.524	ENSGAGG00000024412	SMARCA2	100	84.288	Gopherus_agassizii
ENSPKIG00000018469	-	100	76.766	ENSGGOG00000000513	SMARCA2	100	82.384	Gorilla_gorilla
ENSPKIG00000018469	-	100	83.470	ENSHBUG00000006691	SMARCA2	100	84.287	Haplochromis_burtoni
ENSPKIG00000018469	-	97	81.634	ENSHGLG00000005215	SMARCA2	99	82.038	Heterocephalus_glaber_female
ENSPKIG00000018469	-	97	83.927	ENSHGLG00100010496	SMARCA2	100	84.013	Heterocephalus_glaber_male
ENSPKIG00000018469	-	89	80.117	ENSHCOG00000015348	-	100	80.117	Hippocampus_comes
ENSPKIG00000018469	-	99	86.667	ENSIPUG00000011060	smarca2	99	86.421	Ictalurus_punctatus
ENSPKIG00000018469	-	97	82.380	ENSSTOG00000006812	SMARCA2	100	82.868	Ictidomys_tridecemlineatus
ENSPKIG00000018469	-	97	82.376	ENSJJAG00000010867	Smarca2	100	82.730	Jaculus_jaculus
ENSPKIG00000018469	-	100	82.492	ENSKMAG00000015844	-	100	83.178	Kryptolebias_marmoratus
ENSPKIG00000018469	-	97	86.611	ENSLOCG00000011499	smarca2	99	87.375	Lepisosteus_oculatus
ENSPKIG00000018469	-	97	81.137	ENSLAFG00000014061	SMARCA2	100	81.990	Loxodonta_africana
ENSPKIG00000018469	-	100	83.247	ENSMFAG00000003814	SMARCA2	100	83.765	Macaca_fascicularis
ENSPKIG00000018469	-	100	82.792	ENSMMUG00000015279	SMARCA2	100	83.185	Macaca_mulatta
ENSPKIG00000018469	-	100	82.822	ENSMNEG00000041069	SMARCA2	100	83.344	Macaca_nemestrina
ENSPKIG00000018469	-	100	83.519	ENSMLEG00000027418	SMARCA2	100	83.496	Mandrillus_leucophaeus
ENSPKIG00000018469	-	100	83.468	ENSMAMG00000003056	SMARCA2	100	84.030	Mastacembelus_armatus
ENSPKIG00000018469	-	100	83.816	ENSMZEG00005020709	SMARCA2	100	84.635	Maylandia_zebra
ENSPKIG00000018469	-	74	69.854	ENSMGAG00000005160	-	100	69.588	Meleagris_gallopavo
ENSPKIG00000018469	-	100	82.981	ENSMICG00000005162	SMARCA2	100	83.376	Microcebus_murinus
ENSPKIG00000018469	-	97	82.192	ENSMOCG00000001611	Smarca2	100	82.517	Microtus_ochrogaster
ENSPKIG00000018469	-	99	81.527	ENSMMOG00000014196	SMARCA2	99	82.255	Mola_mola
ENSPKIG00000018469	-	100	83.195	ENSMODG00000003578	SMARCA2	100	83.969	Monodelphis_domestica
ENSPKIG00000018469	-	98	84.204	ENSMALG00000009611	SMARCA2	99	84.391	Monopterus_albus
ENSPKIG00000018469	-	97	81.359	MGP_CAROLIEiJ_G0022841	Smarca2	100	81.767	Mus_caroli
ENSPKIG00000018469	-	97	81.347	ENSMUSG00000024921	Smarca2	99	98.000	Mus_musculus
ENSPKIG00000018469	-	97	81.558	MGP_PahariEiJ_G0014334	Smarca2	100	81.962	Mus_pahari
ENSPKIG00000018469	-	97	81.230	MGP_SPRETEiJ_G0023759	Smarca2	98	90.909	Mus_spretus
ENSPKIG00000018469	-	83	87.177	ENSMPUG00000005171	SMARCA2	94	87.334	Mustela_putorius_furo
ENSPKIG00000018469	-	99	77.688	ENSMLUG00000002342	SMARCA2	99	78.424	Myotis_lucifugus
ENSPKIG00000018469	-	97	81.123	ENSNGAG00000000108	Smarca2	99	81.349	Nannospalax_galili
ENSPKIG00000018469	-	95	70.811	ENSNBRG00000017998	SMARCA2	94	82.587	Neolamprologus_brichardi
ENSPKIG00000018469	-	100	82.532	ENSNLEG00000008575	SMARCA2	100	83.117	Nomascus_leucogenys
ENSPKIG00000018469	-	100	76.785	ENSMEUG00000009812	SMARCA2	100	77.442	Notamacropus_eugenii
ENSPKIG00000018469	-	83	83.189	ENSOPRG00000013474	SMARCA2	100	77.890	Ochotona_princeps
ENSPKIG00000018469	-	97	81.409	ENSODEG00000005452	SMARCA2	99	82.014	Octodon_degus
ENSPKIG00000018469	-	99	83.944	ENSONIG00000014163	SMARCA2	99	84.191	Oreochromis_niloticus
ENSPKIG00000018469	-	50	88.801	ENSOANG00000008299	-	95	90.431	Ornithorhynchus_anatinus
ENSPKIG00000018469	-	83	88.477	ENSOCUG00000006320	SMARCA2	100	82.416	Oryctolagus_cuniculus
ENSPKIG00000018469	-	100	83.082	ENSORLG00000020820	SMARCA2	100	84.025	Oryzias_latipes
ENSPKIG00000018469	-	100	83.375	ENSORLG00015006289	SMARCA2	100	84.320	Oryzias_latipes_hsok
ENSPKIG00000018469	-	100	84.819	ENSOMEG00000009736	-	100	85.391	Oryzias_melastigma
ENSPKIG00000018469	-	82	88.827	ENSOGAG00000017053	SMARCA2	99	81.537	Otolemur_garnettii
ENSPKIG00000018469	-	100	82.353	ENSOARG00000013265	SMARCA2	100	83.013	Ovis_aries
ENSPKIG00000018469	-	93	88.452	ENSPPAG00000038717	SMARCA2	100	83.497	Pan_paniscus
ENSPKIG00000018469	-	100	83.301	ENSPPRG00000001879	SMARCA2	100	83.825	Panthera_pardus
ENSPKIG00000018469	-	100	82.435	ENSPTRG00000051168	SMARCA2	100	83.069	Pan_troglodytes
ENSPKIG00000018469	-	100	77.884	ENSPANG00000025121	SMARCA2	100	78.131	Papio_anubis
ENSPKIG00000018469	-	100	83.386	ENSPSIG00000006284	SMARCA2	100	84.084	Pelodiscus_sinensis
ENSPKIG00000018469	-	98	78.865	ENSPMGG00000013696	-	99	79.482	Periophthalmus_magnuspinnatus
ENSPKIG00000018469	-	97	81.185	ENSPEMG00000019821	Smarca2	100	81.674	Peromyscus_maniculatus_bairdii
ENSPKIG00000018469	-	94	70.423	ENSPMAG00000005337	-	97	70.823	Petromyzon_marinus
ENSPKIG00000018469	-	100	84.320	ENSPCIG00000015658	SMARCA2	100	84.785	Phascolarctos_cinereus
ENSPKIG00000018469	-	100	82.707	ENSPFOG00000001856	SMARCA2	100	83.271	Poecilia_formosa
ENSPKIG00000018469	-	99	82.397	ENSPLAG00000017829	SMARCA2	98	81.877	Poecilia_latipinna
ENSPKIG00000018469	-	99	82.513	ENSPMEG00000001815	-	99	82.763	Poecilia_mexicana
ENSPKIG00000018469	-	100	82.090	ENSPREG00000013800	SMARCA2	100	82.649	Poecilia_reticulata
ENSPKIG00000018469	-	100	82.334	ENSPPYG00000019258	SMARCA2	100	82.728	Pongo_abelii
ENSPKIG00000018469	-	76	76.761	ENSPCAG00000016969	SMARCA2	78	76.761	Procavia_capensis
ENSPKIG00000018469	-	100	81.086	ENSPCOG00000025709	SMARCA2	100	81.470	Propithecus_coquereli
ENSPKIG00000018469	-	90	84.547	ENSPVAG00000000901	SMARCA2	94	84.628	Pteropus_vampyrus
ENSPKIG00000018469	-	100	81.456	ENSPNYG00000004533	SMARCA2	100	81.772	Pundamilia_nyererei
ENSPKIG00000018469	-	99	87.997	ENSPNAG00000014635	smarca2	98	88.329	Pygocentrus_nattereri
ENSPKIG00000018469	-	97	80.680	ENSRNOG00000011931	Smarca2	100	81.238	Rattus_norvegicus
ENSPKIG00000018469	-	97	82.279	ENSRBIG00000038618	SMARCA2	99	84.822	Rhinopithecus_bieti
ENSPKIG00000018469	-	97	82.031	ENSRROG00000019271	SMARCA2	99	84.494	Rhinopithecus_roxellana
ENSPKIG00000018469	-	94	88.310	ENSSBOG00000034827	SMARCA2	100	82.859	Saimiri_boliviensis_boliviensis
ENSPKIG00000018469	-	100	81.882	ENSSHAG00000007884	SMARCA2	100	83.577	Sarcophilus_harrisii
ENSPKIG00000018469	-	91	90.961	ENSSFOG00015014870	SMARCA2	97	92.753	Scleropages_formosus
ENSPKIG00000018469	-	100	83.280	ENSSMAG00000013707	SMARCA2	100	83.789	Scophthalmus_maximus
ENSPKIG00000018469	-	100	81.863	ENSSDUG00000008852	-	100	82.752	Seriola_dumerili
ENSPKIG00000018469	-	98	82.470	ENSSLDG00000025449	SMARCA2	99	82.510	Seriola_lalandi_dorsalis
ENSPKIG00000018469	-	95	72.414	ENSSARG00000007888	SMARCA2	94	74.138	Sorex_araneus
ENSPKIG00000018469	-	96	80.759	ENSSPUG00000001629	SMARCA2	98	81.654	Sphenodon_punctatus
ENSPKIG00000018469	-	100	84.349	ENSSPAG00000020091	-	100	84.789	Stegastes_partitus
ENSPKIG00000018469	-	97	83.377	ENSSSCG00000005232	SMARCA2	100	83.815	Sus_scrofa
ENSPKIG00000018469	-	97	83.344	ENSTGUG00000005460	SMARCA2	100	84.150	Taeniopygia_guttata
ENSPKIG00000018469	-	99	83.110	ENSTRUG00000015619	SMARCA2	100	83.030	Takifugu_rubripes
ENSPKIG00000018469	-	65	100.000	ENSTBEG00000008767	SMARCA2	68	100.000	Tupaia_belangeri
ENSPKIG00000018469	-	95	83.757	ENSTTRG00000002033	SMARCA2	95	83.845	Tursiops_truncatus
ENSPKIG00000018469	-	89	83.286	ENSUAMG00000024701	SMARCA2	99	85.609	Ursus_americanus
ENSPKIG00000018469	-	87	81.780	ENSVPAG00000001204	SMARCA2	99	76.676	Vicugna_pacos
ENSPKIG00000018469	-	76	87.983	ENSVVUG00000004598	SMARCA2	97	87.853	Vulpes_vulpes
ENSPKIG00000018469	-	99	84.404	ENSXETG00000015299	smarca2	100	79.117	Xenopus_tropicalis
ENSPKIG00000018469	-	89	81.405	ENSXCOG00000011073	SMARCA2	99	81.754	Xiphophorus_couchianus
ENSPKIG00000018469	-	100	81.813	ENSXMAG00000015611	SMARCA2	100	82.371	Xiphophorus_maculatus