EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000018497 (Gene tree)
Gene ID: 111842086
Gene Symbol: ythdc1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 11724 bases
Position: chrPGUA01000010.1:2296692-2308415
Accession: 111842086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000011494	YTH	PF04146.15	8.9e-41	1	1
ENSPKIP00000011449	YTH	PF04146.15	9e-41	1	1
ENSPKIP00000011415	YTH	PF04146.15	9.4e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000023438	-	2064	-	ENSPKIP00000011494	687 (aa)	-	-
ENSPKIT00000023357	-	2425	-	ENSPKIP00000011415	714 (aa)	XP_023664131	UPI000CD66E28
ENSPKIT00000023392	-	2079	-	ENSPKIP00000011449	692 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000018497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000018497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000018497	ythdc1	93	69.186	ENSG00000083896	YTHDC1	85	83.750	Homo_sapiens
ENSPKIG00000018497	ythdc1	67	61.250	ENSAPOG00000013997	ythdc1	99	54.937	Acanthochromis_polyacanthus
ENSPKIG00000018497	ythdc1	93	69.465	ENSAMEG00000005688	YTHDC1	78	83.803	Ailuropoda_melanoleuca
ENSPKIG00000018497	ythdc1	74	63.793	ENSACIG00000019728	ythdc1	81	62.972	Amphilophus_citrinellus
ENSPKIG00000018497	ythdc1	59	66.059	ENSAOCG00000000239	ythdc1	94	60.147	Amphiprion_ocellaris
ENSPKIG00000018497	ythdc1	50	70.685	ENSAPEG00000000618	ythdc1	90	59.837	Amphiprion_percula
ENSPKIG00000018497	ythdc1	52	67.867	ENSATEG00000023007	ythdc1	96	58.605	Anabas_testudineus
ENSPKIG00000018497	ythdc1	91	70.890	ENSAPLG00000009921	YTHDC1	92	70.136	Anas_platyrhynchos
ENSPKIG00000018497	ythdc1	93	68.639	ENSACAG00000009697	YTHDC1	93	68.195	Anolis_carolinensis
ENSPKIG00000018497	ythdc1	93	69.086	ENSANAG00000001522	YTHDC1	93	69.578	Aotus_nancymaae
ENSPKIG00000018497	ythdc1	59	65.148	ENSACLG00000019371	ythdc1	94	60.292	Astatotilapia_calliptera
ENSPKIG00000018497	ythdc1	93	77.361	ENSAMXG00000006978	ythdc1	92	77.811	Astyanax_mexicanus
ENSPKIG00000018497	ythdc1	93	69.231	ENSBTAG00000015572	YTHDC1	93	69.956	Bos_taurus
ENSPKIG00000018497	ythdc1	93	68.940	ENSCJAG00000009934	YTHDC1	93	69.432	Callithrix_jacchus
ENSPKIG00000018497	ythdc1	93	69.465	ENSCAFG00000002821	YTHDC1	78	83.803	Canis_familiaris
ENSPKIG00000018497	ythdc1	93	69.465	ENSCAFG00020027112	YTHDC1	78	83.803	Canis_lupus_dingo
ENSPKIG00000018497	ythdc1	83	72.158	ENSCHIG00000004810	YTHDC1	95	68.138	Capra_hircus
ENSPKIG00000018497	ythdc1	93	69.041	ENSTSYG00000011668	YTHDC1	93	69.242	Carlito_syrichta
ENSPKIG00000018497	ythdc1	90	47.612	ENSCAPG00000008722	YTHDC1	90	47.994	Cavia_aperea
ENSPKIG00000018497	ythdc1	83	74.648	ENSCPOG00000010929	YTHDC1	92	65.060	Cavia_porcellus
ENSPKIG00000018497	ythdc1	93	68.996	ENSCCAG00000035754	YTHDC1	93	69.051	Cebus_capucinus
ENSPKIG00000018497	ythdc1	93	68.149	ENSCATG00000036320	YTHDC1	97	67.366	Cercocebus_atys
ENSPKIG00000018497	ythdc1	91	68.029	ENSCLAG00000005482	YTHDC1	92	68.228	Chinchilla_lanigera
ENSPKIG00000018497	ythdc1	93	68.795	ENSCSAG00000005252	YTHDC1	93	69.287	Chlorocebus_sabaeus
ENSPKIG00000018497	ythdc1	92	70.404	ENSCPBG00000021965	YTHDC1	94	69.029	Chrysemys_picta_bellii
ENSPKIG00000018497	ythdc1	93	68.940	ENSCANG00000004769	YTHDC1	96	67.176	Colobus_angolensis_palliatus
ENSPKIG00000018497	ythdc1	93	67.816	ENSCGRG00001000816	Ythdc1	93	67.341	Cricetulus_griseus_chok1gshd
ENSPKIG00000018497	ythdc1	91	68.483	ENSCGRG00000009807	Ythdc1	92	68.000	Cricetulus_griseus_crigri
ENSPKIG00000018497	ythdc1	91	52.339	ENSCSEG00000020404	ythdc1	94	59.942	Cynoglossus_semilaevis
ENSPKIG00000018497	ythdc1	76	62.358	ENSCVAG00000022349	ythdc1	94	58.106	Cyprinodon_variegatus
ENSPKIG00000018497	ythdc1	93	73.083	ENSDARG00000051953	ythdc1	92	73.494	Danio_rerio
ENSPKIG00000018497	ythdc1	93	69.839	ENSDNOG00000004949	YTHDC1	93	69.163	Dasypus_novemcinctus
ENSPKIG00000018497	ythdc1	91	69.072	ENSDORG00000013045	Ythdc1	92	70.250	Dipodomys_ordii
ENSPKIG00000018497	ythdc1	72	94.366	ENSETEG00000001878	YTHDC1	68	90.909	Echinops_telfairi
ENSPKIG00000018497	ythdc1	59	40.000	ENSEBUG00000013696	ythdc1	72	41.138	Eptatretus_burgeri
ENSPKIG00000018497	ythdc1	93	69.609	ENSEASG00005018383	YTHDC1	78	83.803	Equus_asinus_asinus
ENSPKIG00000018497	ythdc1	93	69.754	ENSECAG00000018303	YTHDC1	79	87.234	Equus_caballus
ENSPKIG00000018497	ythdc1	60	83.023	ENSEEUG00000015466	YTHDC1	93	68.705	Erinaceus_europaeus
ENSPKIG00000018497	ythdc1	93	71.930	ENSELUG00000014029	ythdc1	96	71.687	Esox_lucius
ENSPKIG00000018497	ythdc1	93	69.420	ENSFCAG00000026791	YTHDC1	78	83.803	Felis_catus
ENSPKIG00000018497	ythdc1	67	81.818	ENSFALG00000006581	YTHDC1	87	81.710	Ficedula_albicollis
ENSPKIG00000018497	ythdc1	91	68.935	ENSFDAG00000018560	YTHDC1	92	69.139	Fukomys_damarensis
ENSPKIG00000018497	ythdc1	72	52.840	ENSFHEG00000001286	ythdc1	82	50.000	Fundulus_heteroclitus
ENSPKIG00000018497	ythdc1	69	68.651	ENSGMOG00000018815	ythdc1	80	68.651	Gadus_morhua
ENSPKIG00000018497	ythdc1	91	70.420	ENSGALG00000035906	YTHDC1	88	67.954	Gallus_gallus
ENSPKIG00000018497	ythdc1	70	56.198	ENSGAFG00000001759	ythdc1	94	56.818	Gambusia_affinis
ENSPKIG00000018497	ythdc1	92	53.143	ENSGACG00000015486	ythdc1	93	51.891	Gasterosteus_aculeatus
ENSPKIG00000018497	ythdc1	93	68.960	ENSGAGG00000007108	YTHDC1	91	69.094	Gopherus_agassizii
ENSPKIG00000018497	ythdc1	93	68.293	ENSGGOG00000021958	YTHDC1	97	67.429	Gorilla_gorilla
ENSPKIG00000018497	ythdc1	92	56.912	ENSHBUG00000019288	ythdc1	93	60.499	Haplochromis_burtoni
ENSPKIG00000018497	ythdc1	93	68.353	ENSHGLG00000006319	-	93	68.551	Heterocephalus_glaber_female
ENSPKIG00000018497	ythdc1	94	56.278	ENSHGLG00000003239	-	86	55.758	Heterocephalus_glaber_female
ENSPKIG00000018497	ythdc1	94	54.706	ENSHGLG00100008060	-	86	54.148	Heterocephalus_glaber_male
ENSPKIG00000018497	ythdc1	93	68.314	ENSHGLG00100001556	-	93	68.513	Heterocephalus_glaber_male
ENSPKIG00000018497	ythdc1	63	72.340	ENSHCOG00000001520	ythdc1	85	72.340	Hippocampus_comes
ENSPKIG00000018497	ythdc1	93	77.096	ENSIPUG00000018136	ythdc1	92	77.096	Ictalurus_punctatus
ENSPKIG00000018497	ythdc1	83	83.063	ENSSTOG00000013652	YTHDC1	93	69.154	Ictidomys_tridecemlineatus
ENSPKIG00000018497	ythdc1	91	64.897	ENSJJAG00000010268	Ythdc1	93	67.651	Jaculus_jaculus
ENSPKIG00000018497	ythdc1	59	64.027	ENSKMAG00000006483	ythdc1	86	68.849	Kryptolebias_marmoratus
ENSPKIG00000018497	ythdc1	65	77.273	ENSLBEG00000020831	ythdc1	77	75.676	Labrus_bergylta
ENSPKIG00000018497	ythdc1	87	66.252	ENSLACG00000004893	YTHDC1	92	67.496	Latimeria_chalumnae
ENSPKIG00000018497	ythdc1	93	76.583	ENSLOCG00000003045	ythdc1	92	73.105	Lepisosteus_oculatus
ENSPKIG00000018497	ythdc1	93	68.596	ENSLAFG00000021592	YTHDC1	100	66.090	Loxodonta_africana
ENSPKIG00000018497	ythdc1	93	68.149	ENSMFAG00000031927	YTHDC1	96	67.176	Macaca_fascicularis
ENSPKIG00000018497	ythdc1	93	68.940	ENSMMUG00000002265	YTHDC1	93	69.432	Macaca_mulatta
ENSPKIG00000018497	ythdc1	93	68.940	ENSMNEG00000033751	YTHDC1	96	67.176	Macaca_nemestrina
ENSPKIG00000018497	ythdc1	93	68.940	ENSMLEG00000042147	YTHDC1	96	67.176	Mandrillus_leucophaeus
ENSPKIG00000018497	ythdc1	58	66.129	ENSMAMG00000013122	ythdc1	92	60.174	Mastacembelus_armatus
ENSPKIG00000018497	ythdc1	59	65.148	ENSMZEG00005023173	ythdc1	93	60.292	Maylandia_zebra
ENSPKIG00000018497	ythdc1	93	71.006	ENSMGAG00000010391	YTHDC1	92	69.837	Meleagris_gallopavo
ENSPKIG00000018497	ythdc1	93	67.672	ENSMAUG00000001286	Ythdc1	93	67.486	Mesocricetus_auratus
ENSPKIG00000018497	ythdc1	93	68.876	ENSMICG00000034640	YTHDC1	93	69.364	Microcebus_murinus
ENSPKIG00000018497	ythdc1	93	67.873	ENSMOCG00000020201	Ythdc1	93	68.215	Microtus_ochrogaster
ENSPKIG00000018497	ythdc1	93	71.364	ENSMODG00000020754	-	92	70.765	Monodelphis_domestica
ENSPKIG00000018497	ythdc1	90	60.793	ENSMODG00000014337	-	95	61.502	Monodelphis_domestica
ENSPKIG00000018497	ythdc1	50	57.391	ENSMODG00000004117	-	92	58.044	Monodelphis_domestica
ENSPKIG00000018497	ythdc1	96	44.681	ENSMODG00000010076	-	59	56.459	Monodelphis_domestica
ENSPKIG00000018497	ythdc1	68	54.105	ENSMODG00000009173	-	88	55.981	Monodelphis_domestica
ENSPKIG00000018497	ythdc1	70	64.516	ENSMALG00000013412	ythdc1	94	59.451	Monopterus_albus
ENSPKIG00000018497	ythdc1	93	68.169	MGP_CAROLIEiJ_G0027347	Ythdc1	76	86.170	Mus_caroli
ENSPKIG00000018497	ythdc1	93	68.070	ENSMUSG00000035851	Ythdc1	93	68.268	Mus_musculus
ENSPKIG00000018497	ythdc1	93	68.215	MGP_PahariEiJ_G0017126	Ythdc1	93	68.559	Mus_pahari
ENSPKIG00000018497	ythdc1	93	68.070	MGP_SPRETEiJ_G0028339	Ythdc1	93	68.268	Mus_spretus
ENSPKIG00000018497	ythdc1	93	61.159	ENSMPUG00000001743	YTHDC1	93	60.677	Mustela_putorius_furo
ENSPKIG00000018497	ythdc1	91	69.185	ENSMLUG00000016300	YTHDC1	92	70.074	Myotis_lucifugus
ENSPKIG00000018497	ythdc1	60	57.883	ENSNGAG00000024000	Ythdc1	93	58.691	Nannospalax_galili
ENSPKIG00000018497	ythdc1	69	61.790	ENSNBRG00000007663	ythdc1	95	60.909	Neolamprologus_brichardi
ENSPKIG00000018497	ythdc1	91	67.249	ENSNLEG00000009202	YTHDC1	96	67.686	Nomascus_leucogenys
ENSPKIG00000018497	ythdc1	68	70.130	ENSMEUG00000007128	YTHDC1	68	70.358	Notamacropus_eugenii
ENSPKIG00000018497	ythdc1	67	84.887	ENSOPRG00000008986	YTHDC1	66	84.740	Ochotona_princeps
ENSPKIG00000018497	ythdc1	93	69.298	ENSODEG00000001715	YTHDC1	93	69.648	Octodon_degus
ENSPKIG00000018497	ythdc1	99	77.273	ENSONIG00000012651	ythdc1	91	70.000	Oreochromis_niloticus
ENSPKIG00000018497	ythdc1	75	81.159	ENSOANG00000014398	YTHDC1	73	81.159	Ornithorhynchus_anatinus
ENSPKIG00000018497	ythdc1	93	62.990	ENSOCUG00000015886	YTHDC1	76	84.518	Oryctolagus_cuniculus
ENSPKIG00000018497	ythdc1	92	56.278	ENSORLG00000030544	ythdc1	94	59.475	Oryzias_latipes
ENSPKIG00000018497	ythdc1	92	56.425	ENSORLG00020019316	ythdc1	94	60.207	Oryzias_latipes_hni
ENSPKIG00000018497	ythdc1	64	61.039	ENSOMEG00000000551	ythdc1	94	59.057	Oryzias_melastigma
ENSPKIG00000018497	ythdc1	93	69.041	ENSOGAG00000003362	YTHDC1	93	69.388	Otolemur_garnettii
ENSPKIG00000018497	ythdc1	93	69.231	ENSOARG00000008633	YTHDC1	93	69.956	Ovis_aries
ENSPKIG00000018497	ythdc1	93	68.103	ENSPPAG00000041315	YTHDC1	97	67.748	Pan_paniscus
ENSPKIG00000018497	ythdc1	93	68.768	ENSPPRG00000011979	YTHDC1	78	83.527	Panthera_pardus
ENSPKIG00000018497	ythdc1	91	68.314	ENSPTIG00000015527	YTHDC1	79	83.063	Panthera_tigris_altaica
ENSPKIG00000018497	ythdc1	93	68.103	ENSPTRG00000016105	YTHDC1	97	67.748	Pan_troglodytes
ENSPKIG00000018497	ythdc1	93	68.149	ENSPANG00000021590	YTHDC1	96	67.173	Papio_anubis
ENSPKIG00000018497	ythdc1	91	70.120	ENSPSIG00000002782	YTHDC1	92	69.820	Pelodiscus_sinensis
ENSPKIG00000018497	ythdc1	91	67.847	ENSPEMG00000013850	Ythdc1	92	68.195	Peromyscus_maniculatus_bairdii
ENSPKIG00000018497	ythdc1	93	71.214	ENSPCIG00000006870	YTHDC1	92	70.615	Phascolarctos_cinereus
ENSPKIG00000018497	ythdc1	75	61.009	ENSPFOG00000013404	ythdc1	94	59.412	Poecilia_formosa
ENSPKIG00000018497	ythdc1	60	61.239	ENSPLAG00000011079	ythdc1	86	68.109	Poecilia_latipinna
ENSPKIG00000018497	ythdc1	75	61.009	ENSPMEG00000009238	ythdc1	94	59.559	Poecilia_mexicana
ENSPKIG00000018497	ythdc1	77	61.151	ENSPREG00000016973	ythdc1	99	53.901	Poecilia_reticulata
ENSPKIG00000018497	ythdc1	76	73.002	ENSPPYG00000014726	YTHDC1	87	73.797	Pongo_abelii
ENSPKIG00000018497	ythdc1	77	72.926	ENSPCAG00000009607	YTHDC1	77	72.489	Procavia_capensis
ENSPKIG00000018497	ythdc1	83	75.973	ENSPCOG00000019105	YTHDC1	92	64.884	Propithecus_coquereli
ENSPKIG00000018497	ythdc1	93	66.474	ENSPVAG00000015551	YTHDC1	93	67.575	Pteropus_vampyrus
ENSPKIG00000018497	ythdc1	59	65.148	ENSPNYG00000011687	ythdc1	94	60.292	Pundamilia_nyererei
ENSPKIG00000018497	ythdc1	93	80.746	ENSPNAG00000028365	ythdc1	93	80.149	Pygocentrus_nattereri
ENSPKIG00000018497	ythdc1	83	82.599	ENSRNOG00000001996	Ythdc1	93	68.006	Rattus_norvegicus
ENSPKIG00000018497	ythdc1	91	67.638	ENSRBIG00000028279	YTHDC1	96	66.858	Rhinopithecus_bieti
ENSPKIG00000018497	ythdc1	93	68.940	ENSRROG00000035028	YTHDC1	96	67.176	Rhinopithecus_roxellana
ENSPKIG00000018497	ythdc1	93	68.149	ENSSBOG00000022353	YTHDC1	96	67.176	Saimiri_boliviensis_boliviensis
ENSPKIG00000018497	ythdc1	93	70.615	ENSSHAG00000002538	YTHDC1	91	70.805	Sarcophilus_harrisii
ENSPKIG00000018497	ythdc1	93	80.539	ENSSFOG00015003298	ythdc1	93	79.790	Scleropages_formosus
ENSPKIG00000018497	ythdc1	73	60.626	ENSSMAG00000009086	ythdc1	94	59.038	Scophthalmus_maximus
ENSPKIG00000018497	ythdc1	58	66.744	ENSSDUG00000022008	ythdc1	94	62.170	Seriola_dumerili
ENSPKIG00000018497	ythdc1	58	66.513	ENSSLDG00000007926	ythdc1	94	61.919	Seriola_lalandi_dorsalis
ENSPKIG00000018497	ythdc1	61	83.099	ENSSARG00000010960	YTHDC1	89	75.908	Sorex_araneus
ENSPKIG00000018497	ythdc1	81	81.733	ENSSPUG00000009357	YTHDC1	97	67.976	Sphenodon_punctatus
ENSPKIG00000018497	ythdc1	59	65.455	ENSSPAG00000011449	ythdc1	94	60.940	Stegastes_partitus
ENSPKIG00000018497	ythdc1	85	67.488	ENSSSCG00000035505	YTHDC1	93	68.759	Sus_scrofa
ENSPKIG00000018497	ythdc1	93	70.282	ENSTGUG00000004452	-	92	69.985	Taeniopygia_guttata
ENSPKIG00000018497	ythdc1	66	76.923	ENSTRUG00000010142	ythdc1	70	76.923	Takifugu_rubripes
ENSPKIG00000018497	ythdc1	75	69.841	ENSTNIG00000013243	ythdc1	89	70.396	Tetraodon_nigroviridis
ENSPKIG00000018497	ythdc1	93	66.518	ENSTBEG00000011546	YTHDC1	92	66.518	Tupaia_belangeri
ENSPKIG00000018497	ythdc1	93	68.741	ENSTTRG00000005083	YTHDC1	93	67.925	Tursiops_truncatus
ENSPKIG00000018497	ythdc1	85	68.025	ENSUAMG00000010388	YTHDC1	92	67.767	Ursus_americanus
ENSPKIG00000018497	ythdc1	91	63.166	ENSUMAG00000013668	YTHDC1	90	63.470	Ursus_maritimus
ENSPKIG00000018497	ythdc1	93	66.618	ENSVPAG00000009040	YTHDC1	92	67.105	Vicugna_pacos
ENSPKIG00000018497	ythdc1	91	68.551	ENSVVUG00000005387	YTHDC1	78	83.527	Vulpes_vulpes
ENSPKIG00000018497	ythdc1	93	65.583	ENSXETG00000017960	ythdc1	93	64.845	Xenopus_tropicalis
ENSPKIG00000018497	ythdc1	53	54.455	ENSXCOG00000000530	ythdc1	85	55.634	Xiphophorus_couchianus
ENSPKIG00000018497	ythdc1	75	61.009	ENSXMAG00000005196	ythdc1	94	57.329	Xiphophorus_maculatus