EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000018719 (Gene tree)
Gene ID: -
Gene Symbol: rbm12b
Alias: -
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 8692 bases
Position: chrPGUA01000205.1:478068-486759
Accession: ZDB-GENE-030131-6428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000011749	RRM_1	PF00076.22	5.1e-27	1	2
ENSPKIP00000011749	RRM_1	PF00076.22	5.1e-27	2	2
ENSPKIP00000011758	RRM_1	PF00076.22	5.1e-27	1	2
ENSPKIP00000011758	RRM_1	PF00076.22	5.1e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000023700	-	2687	-	ENSPKIP00000011749	668 (aa)	-	-
ENSPKIT00000023709	-	2535	-	ENSPKIP00000011758	668 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000018719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000018719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000018719	rbm12b	55	30.631	ENSPKIG00000008373	HNRNPH3	86	32.584
ENSPKIG00000018719	rbm12b	73	33.719	ENSPKIG00000014851	zgc:153215	99	33.654
ENSPKIG00000018719	rbm12b	87	34.667	ENSPKIG00000009532	-	52	34.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000018719	rbm12b	85	48.052	ENSG00000183808	RBM12B	99	71.250	Homo_sapiens
ENSPKIG00000018719	rbm12b	99	47.534	ENSAPOG00000013963	rbm12b	100	47.534	Acanthochromis_polyacanthus
ENSPKIG00000018719	rbm12b	71	30.453	ENSAPOG00000008836	zgc:153215	95	30.453	Acanthochromis_polyacanthus
ENSPKIG00000018719	rbm12b	85	49.351	ENSAMEG00000007134	RBM12B	67	49.351	Ailuropoda_melanoleuca
ENSPKIG00000018719	rbm12b	73	49.797	ENSACIG00000014943	rbm12b	97	51.090	Amphilophus_citrinellus
ENSPKIG00000018719	rbm12b	72	30.357	ENSACIG00000013317	zgc:153215	98	30.357	Amphilophus_citrinellus
ENSPKIG00000018719	rbm12b	99	47.964	ENSAOCG00000024270	rbm12b	100	47.970	Amphiprion_ocellaris
ENSPKIG00000018719	rbm12b	73	30.039	ENSAOCG00000010819	zgc:153215	99	31.579	Amphiprion_ocellaris
ENSPKIG00000018719	rbm12b	97	51.653	ENSAPEG00000022079	rbm12b	96	51.653	Amphiprion_percula
ENSPKIG00000018719	rbm12b	99	49.924	ENSATEG00000004578	rbm12b	97	50.301	Anabas_testudineus
ENSPKIG00000018719	rbm12b	73	51.250	ENSATEG00000001886	zgc:153215	78	46.809	Anabas_testudineus
ENSPKIG00000018719	rbm12b	98	40.863	ENSAPLG00000002020	RBM12B	100	41.394	Anas_platyrhynchos
ENSPKIG00000018719	rbm12b	85	45.455	ENSACAG00000003463	RBM12B	57	45.455	Anolis_carolinensis
ENSPKIG00000018719	rbm12b	88	48.052	ENSANAG00000034015	RBM12B	69	48.052	Aotus_nancymaae
ENSPKIG00000018719	rbm12b	99	49.925	ENSACLG00000005575	rbm12b	99	49.627	Astatotilapia_calliptera
ENSPKIG00000018719	rbm12b	97	48.544	ENSACLG00000005578	rbm12b	100	47.896	Astatotilapia_calliptera
ENSPKIG00000018719	rbm12b	73	31.380	ENSACLG00000007675	zgc:153215	99	31.380	Astatotilapia_calliptera
ENSPKIG00000018719	rbm12b	63	53.763	ENSAMXG00000020853	zgc:153215	69	53.763	Astyanax_mexicanus
ENSPKIG00000018719	rbm12b	99	50.301	ENSAMXG00000041973	rbm12b	100	51.278	Astyanax_mexicanus
ENSPKIG00000018719	rbm12b	85	48.052	ENSBTAG00000013408	RBM12B	65	48.052	Bos_taurus
ENSPKIG00000018719	rbm12b	85	46.753	ENSCAFG00000009109	RBM12B	57	46.753	Canis_familiaris
ENSPKIG00000018719	rbm12b	85	46.753	ENSCAFG00020012203	RBM12B	65	46.753	Canis_lupus_dingo
ENSPKIG00000018719	rbm12b	73	43.713	ENSCHIG00000006790	RBM12B	67	43.713	Capra_hircus
ENSPKIG00000018719	rbm12b	90	48.052	ENSTSYG00000012515	RBM12B	61	48.052	Carlito_syrichta
ENSPKIG00000018719	rbm12b	85	49.351	ENSCAPG00000003543	RBM12B	59	49.351	Cavia_aperea
ENSPKIG00000018719	rbm12b	85	49.351	ENSCPOG00000007815	RBM12B	59	49.351	Cavia_porcellus
ENSPKIG00000018719	rbm12b	88	48.052	ENSCATG00000030769	RBM12B	67	48.052	Cercocebus_atys
ENSPKIG00000018719	rbm12b	85	49.351	ENSCLAG00000017617	RBM12B	61	49.351	Chinchilla_lanigera
ENSPKIG00000018719	rbm12b	85	48.052	ENSCSAG00000018559	RBM12B	57	48.052	Chlorocebus_sabaeus
ENSPKIG00000018719	rbm12b	83	46.032	ENSCHOG00000008934	RBM12B	60	46.032	Choloepus_hoffmanni
ENSPKIG00000018719	rbm12b	99	40.282	ENSCPBG00000003061	RBM12B	100	40.282	Chrysemys_picta_bellii
ENSPKIG00000018719	rbm12b	85	48.052	ENSCANG00000030379	RBM12B	66	48.052	Colobus_angolensis_palliatus
ENSPKIG00000018719	rbm12b	86	49.351	ENSCGRG00001008710	-	65	49.351	Cricetulus_griseus_chok1gshd
ENSPKIG00000018719	rbm12b	99	47.126	ENSCSEG00000004610	rbm12b	98	46.418	Cynoglossus_semilaevis
ENSPKIG00000018719	rbm12b	56	31.266	ENSCSEG00000001575	-	99	31.266	Cynoglossus_semilaevis
ENSPKIG00000018719	rbm12b	99	46.246	ENSCVAG00000011047	rbm12b	100	46.927	Cyprinodon_variegatus
ENSPKIG00000018719	rbm12b	73	30.524	ENSDARG00000055889	zgc:153215	99	30.957	Danio_rerio
ENSPKIG00000018719	rbm12b	88	59.375	ENSDARG00000079717	rbm12b	84	59.375	Danio_rerio
ENSPKIG00000018719	rbm12b	85	48.052	ENSDNOG00000041608	RBM12B	56	48.052	Dasypus_novemcinctus
ENSPKIG00000018719	rbm12b	85	50.649	ENSDORG00000024034	-	73	50.649	Dipodomys_ordii
ENSPKIG00000018719	rbm12b	77	42.023	ENSETEG00000013005	-	69	42.023	Echinops_telfairi
ENSPKIG00000018719	rbm12b	68	30.786	ENSEBUG00000009015	-	71	30.786	Eptatretus_burgeri
ENSPKIG00000018719	rbm12b	70	30.020	ENSEBUG00000004292	-	72	30.020	Eptatretus_burgeri
ENSPKIG00000018719	rbm12b	57	36.000	ENSEBUG00000010930	-	84	30.754	Eptatretus_burgeri
ENSPKIG00000018719	rbm12b	85	46.753	ENSEASG00005016297	RBM12B	65	46.753	Equus_asinus_asinus
ENSPKIG00000018719	rbm12b	85	46.753	ENSECAG00000017870	RBM12B	58	46.753	Equus_caballus
ENSPKIG00000018719	rbm12b	85	49.351	ENSFCAG00000029274	RBM12B	66	49.351	Felis_catus
ENSPKIG00000018719	rbm12b	98	40.429	ENSFALG00000014893	RBM12B	100	40.256	Ficedula_albicollis
ENSPKIG00000018719	rbm12b	86	49.351	ENSFDAG00000005576	RBM12B	58	49.351	Fukomys_damarensis
ENSPKIG00000018719	rbm12b	99	46.381	ENSFHEG00000016425	rbm12b	100	46.302	Fundulus_heteroclitus
ENSPKIG00000018719	rbm12b	98	52.782	ENSGMOG00000013467	rbm12b	100	52.782	Gadus_morhua
ENSPKIG00000018719	rbm12b	98	40.656	ENSGALG00000035129	RBM12B	100	41.044	Gallus_gallus
ENSPKIG00000018719	rbm12b	72	31.496	ENSGAFG00000007845	zgc:153215	98	31.496	Gambusia_affinis
ENSPKIG00000018719	rbm12b	99	48.126	ENSGAFG00000007224	rbm12b	100	48.726	Gambusia_affinis
ENSPKIG00000018719	rbm12b	99	49.025	ENSGACG00000008682	rbm12b	99	49.025	Gasterosteus_aculeatus
ENSPKIG00000018719	rbm12b	99	39.888	ENSGAGG00000009774	RBM12B	100	39.888	Gopherus_agassizii
ENSPKIG00000018719	rbm12b	88	48.052	ENSGGOG00000011909	RBM12B	66	48.052	Gorilla_gorilla
ENSPKIG00000018719	rbm12b	99	48.191	ENSHBUG00000016227	rbm12b	100	48.316	Haplochromis_burtoni
ENSPKIG00000018719	rbm12b	85	49.351	ENSHGLG00000009063	RBM12B	59	49.351	Heterocephalus_glaber_female
ENSPKIG00000018719	rbm12b	85	49.351	ENSHGLG00100021324	RBM12B	59	49.351	Heterocephalus_glaber_male
ENSPKIG00000018719	rbm12b	99	46.073	ENSHCOG00000014952	rbm12b	100	46.073	Hippocampus_comes
ENSPKIG00000018719	rbm12b	99	51.351	ENSIPUG00000001167	RBM12B	97	51.714	Ictalurus_punctatus
ENSPKIG00000018719	rbm12b	73	32.772	ENSIPUG00000019731	zgc:153215	98	32.772	Ictalurus_punctatus
ENSPKIG00000018719	rbm12b	85	49.351	ENSSTOG00000027445	RBM12B	68	49.351	Ictidomys_tridecemlineatus
ENSPKIG00000018719	rbm12b	85	48.052	ENSJJAG00000004165	-	65	48.052	Jaculus_jaculus
ENSPKIG00000018719	rbm12b	99	43.964	ENSKMAG00000013704	rbm12b	97	43.815	Kryptolebias_marmoratus
ENSPKIG00000018719	rbm12b	73	31.600	ENSKMAG00000004958	zgc:153215	99	31.600	Kryptolebias_marmoratus
ENSPKIG00000018719	rbm12b	98	44.211	ENSKMAG00000013715	rbm12b	99	44.060	Kryptolebias_marmoratus
ENSPKIG00000018719	rbm12b	73	30.588	ENSLBEG00000002597	zgc:153215	99	30.255	Labrus_bergylta
ENSPKIG00000018719	rbm12b	98	41.940	ENSLACG00000007177	RBM12B	100	41.903	Latimeria_chalumnae
ENSPKIG00000018719	rbm12b	99	58.050	ENSLOCG00000018344	rbm12b	100	58.088	Lepisosteus_oculatus
ENSPKIG00000018719	rbm12b	88	46.753	ENSLAFG00000029949	RBM12B	69	46.753	Loxodonta_africana
ENSPKIG00000018719	rbm12b	88	48.052	ENSMFAG00000045430	RBM12B	67	48.052	Macaca_fascicularis
ENSPKIG00000018719	rbm12b	88	48.052	ENSMMUG00000005558	RBM12B	66	48.052	Macaca_mulatta
ENSPKIG00000018719	rbm12b	88	48.052	ENSMNEG00000041292	RBM12B	67	48.052	Macaca_nemestrina
ENSPKIG00000018719	rbm12b	88	48.052	ENSMLEG00000037288	RBM12B	66	48.052	Mandrillus_leucophaeus
ENSPKIG00000018719	rbm12b	99	51.885	ENSMAMG00000011998	rbm12b	100	52.719	Mastacembelus_armatus
ENSPKIG00000018719	rbm12b	99	50.000	ENSMZEG00005015005	rbm12b	100	49.699	Maylandia_zebra
ENSPKIG00000018719	rbm12b	99	47.669	ENSMZEG00005014845	rbm12b	99	47.352	Maylandia_zebra
ENSPKIG00000018719	rbm12b	75	44.146	ENSMGAG00000011985	RBM12B	100	44.444	Meleagris_gallopavo
ENSPKIG00000018719	rbm12b	85	49.351	ENSMAUG00000021752	-	67	49.351	Mesocricetus_auratus
ENSPKIG00000018719	rbm12b	85	48.052	ENSMICG00000036969	RBM12B	67	48.052	Microcebus_murinus
ENSPKIG00000018719	rbm12b	85	48.052	ENSMOCG00000005603	-	67	48.052	Microtus_ochrogaster
ENSPKIG00000018719	rbm12b	94	64.463	ENSMMOG00000002404	rbm12b	95	64.463	Mola_mola
ENSPKIG00000018719	rbm12b	68	37.805	ENSMMOG00000003372	zgc:153215	99	37.805	Mola_mola
ENSPKIG00000018719	rbm12b	86	48.052	ENSMODG00000007436	RBM12B	79	48.052	Monodelphis_domestica
ENSPKIG00000018719	rbm12b	74	33.532	ENSMALG00000001222	zgc:153215	99	33.532	Monopterus_albus
ENSPKIG00000018719	rbm12b	99	49.401	ENSMALG00000012059	rbm12b	100	49.701	Monopterus_albus
ENSPKIG00000018719	rbm12b	85	51.389	ENSMUSG00000052137	Rbm12b2	68	49.333	Mus_musculus
ENSPKIG00000018719	rbm12b	85	52.000	ENSMUSG00000046667	Rbm12b1	67	52.000	Mus_musculus
ENSPKIG00000018719	rbm12b	85	51.389	MGP_SPRETEiJ_G0026766	-	67	49.333	Mus_spretus
ENSPKIG00000018719	rbm12b	85	49.333	MGP_SPRETEiJ_G0026765	-	62	49.333	Mus_spretus
ENSPKIG00000018719	rbm12b	85	48.052	ENSMPUG00000018637	RBM12B	57	48.052	Mustela_putorius_furo
ENSPKIG00000018719	rbm12b	85	44.334	ENSMLUG00000002359	RBM12B	59	44.334	Myotis_lucifugus
ENSPKIG00000018719	rbm12b	88	46.753	ENSNGAG00000002801	-	63	46.753	Nannospalax_galili
ENSPKIG00000018719	rbm12b	99	49.548	ENSNBRG00000015057	rbm12b	100	49.398	Neolamprologus_brichardi
ENSPKIG00000018719	rbm12b	88	48.052	ENSNLEG00000032050	RBM12B	65	48.052	Nomascus_leucogenys
ENSPKIG00000018719	rbm12b	85	49.351	ENSODEG00000019204	RBM12B	59	49.351	Octodon_degus
ENSPKIG00000018719	rbm12b	73	31.481	ENSONIG00000006054	zgc:153215	100	31.481	Oreochromis_niloticus
ENSPKIG00000018719	rbm12b	99	49.850	ENSONIG00000020612	rbm12b	100	49.701	Oreochromis_niloticus
ENSPKIG00000018719	rbm12b	99	38.997	ENSOANG00000015735	-	98	40.251	Ornithorhynchus_anatinus
ENSPKIG00000018719	rbm12b	85	48.052	ENSOCUG00000010353	RBM12B	65	48.052	Oryctolagus_cuniculus
ENSPKIG00000018719	rbm12b	99	44.978	ENSORLG00000008228	rbm12b	98	45.808	Oryzias_latipes
ENSPKIG00000018719	rbm12b	99	45.359	ENSORLG00020013619	rbm12b	98	45.359	Oryzias_latipes_hni
ENSPKIG00000018719	rbm12b	99	44.678	ENSORLG00015019999	rbm12b	98	45.509	Oryzias_latipes_hsok
ENSPKIG00000018719	rbm12b	99	47.910	ENSOMEG00000022523	rbm12b	98	47.910	Oryzias_melastigma
ENSPKIG00000018719	rbm12b	85	48.052	ENSOGAG00000002979	RBM12B	57	48.052	Otolemur_garnettii
ENSPKIG00000018719	rbm12b	85	49.351	ENSPTIG00000020071	RBM12B	65	49.351	Panthera_tigris_altaica
ENSPKIG00000018719	rbm12b	85	48.052	ENSPTRG00000020420	RBM12B	64	48.052	Pan_troglodytes
ENSPKIG00000018719	rbm12b	88	48.052	ENSPANG00000035535	RBM12B	66	48.052	Papio_anubis
ENSPKIG00000018719	rbm12b	98	41.185	ENSPSIG00000001348	RBM12B	100	41.007	Pelodiscus_sinensis
ENSPKIG00000018719	rbm12b	85	50.649	ENSPEMG00000008279	-	67	50.649	Peromyscus_maniculatus_bairdii
ENSPKIG00000018719	rbm12b	86	48.052	ENSPCIG00000008556	RBM12B	79	48.052	Phascolarctos_cinereus
ENSPKIG00000018719	rbm12b	100	47.858	ENSPFOG00000020937	rbm12b	98	47.710	Poecilia_formosa
ENSPKIG00000018719	rbm12b	63	50.538	ENSPFOG00000017451	zgc:153215	70	46.847	Poecilia_formosa
ENSPKIG00000018719	rbm12b	99	48.876	ENSPLAG00000018782	rbm12b	100	48.726	Poecilia_latipinna
ENSPKIG00000018719	rbm12b	99	48.426	ENSPMEG00000011418	rbm12b	100	48.426	Poecilia_mexicana
ENSPKIG00000018719	rbm12b	73	30.400	ENSPMEG00000016662	zgc:153215	99	30.400	Poecilia_mexicana
ENSPKIG00000018719	rbm12b	99	48.426	ENSPREG00000020770	rbm12b	100	49.325	Poecilia_reticulata
ENSPKIG00000018719	rbm12b	73	31.028	ENSPREG00000018608	zgc:153215	99	31.028	Poecilia_reticulata
ENSPKIG00000018719	rbm12b	85	48.052	ENSPPYG00000018745	RBM12B	58	48.052	Pongo_abelii
ENSPKIG00000018719	rbm12b	85	49.351	ENSPCOG00000023546	RBM12B	65	49.351	Propithecus_coquereli
ENSPKIG00000018719	rbm12b	85	48.052	ENSPVAG00000011803	RBM12B	61	48.052	Pteropus_vampyrus
ENSPKIG00000018719	rbm12b	63	46.154	ENSPNYG00000018125	zgc:153215	94	46.154	Pundamilia_nyererei
ENSPKIG00000018719	rbm12b	99	49.849	ENSPNYG00000016696	rbm12b	100	49.699	Pundamilia_nyererei
ENSPKIG00000018719	rbm12b	73	31.703	ENSPNAG00000025628	zgc:153215	99	31.703	Pygocentrus_nattereri
ENSPKIG00000018719	rbm12b	99	51.994	ENSPNAG00000008126	rbm12b	98	52.485	Pygocentrus_nattereri
ENSPKIG00000018719	rbm12b	73	43.347	ENSRNOG00000055292	LOC679087	65	43.347	Rattus_norvegicus
ENSPKIG00000018719	rbm12b	84	51.389	ENSRNOG00000016330	Rbm12b	67	49.333	Rattus_norvegicus
ENSPKIG00000018719	rbm12b	85	48.052	ENSRBIG00000035046	RBM12B	64	48.052	Rhinopithecus_bieti
ENSPKIG00000018719	rbm12b	85	48.052	ENSRROG00000023660	RBM12B	67	48.052	Rhinopithecus_roxellana
ENSPKIG00000018719	rbm12b	88	48.052	ENSSBOG00000027592	RBM12B	66	48.052	Saimiri_boliviensis_boliviensis
ENSPKIG00000018719	rbm12b	86	48.052	ENSSHAG00000015335	RBM12B	79	48.052	Sarcophilus_harrisii
ENSPKIG00000018719	rbm12b	73	35.897	ENSSFOG00015009427	zgc:153215	99	35.897	Scleropages_formosus
ENSPKIG00000018719	rbm12b	99	64.671	ENSSFOG00015001584	rbm12b	100	64.083	Scleropages_formosus
ENSPKIG00000018719	rbm12b	73	32.806	ENSSMAG00000019013	zgc:153215	96	32.806	Scophthalmus_maximus
ENSPKIG00000018719	rbm12b	99	49.319	ENSSMAG00000019708	rbm12b	100	49.319	Scophthalmus_maximus
ENSPKIG00000018719	rbm12b	73	31.445	ENSSDUG00000012545	zgc:153215	99	31.445	Seriola_dumerili
ENSPKIG00000018719	rbm12b	99	50.369	ENSSDUG00000006856	rbm12b	100	50.369	Seriola_dumerili
ENSPKIG00000018719	rbm12b	73	53.750	ENSSLDG00000013581	zgc:153215	77	50.538	Seriola_lalandi_dorsalis
ENSPKIG00000018719	rbm12b	99	50.960	ENSSLDG00000016156	rbm12b	100	50.960	Seriola_lalandi_dorsalis
ENSPKIG00000018719	rbm12b	73	43.426	ENSSARG00000011845	-	67	43.426	Sorex_araneus
ENSPKIG00000018719	rbm12b	73	41.699	ENSSPUG00000016954	RBM12B	91	42.360	Sphenodon_punctatus
ENSPKIG00000018719	rbm12b	73	31.000	ENSSPAG00000023584	zgc:153215	98	31.000	Stegastes_partitus
ENSPKIG00000018719	rbm12b	99	48.733	ENSSPAG00000006774	rbm12b	100	48.733	Stegastes_partitus
ENSPKIG00000018719	rbm12b	86	49.333	ENSSSCG00000006110	RBM12B	57	49.333	Sus_scrofa
ENSPKIG00000018719	rbm12b	75	41.634	ENSTGUG00000011860	RBM12B	97	41.634	Taeniopygia_guttata
ENSPKIG00000018719	rbm12b	99	47.598	ENSTRUG00000013738	rbm12b	100	47.748	Takifugu_rubripes
ENSPKIG00000018719	rbm12b	73	43.927	ENSTBEG00000000449	RBM12B	63	43.927	Tupaia_belangeri
ENSPKIG00000018719	rbm12b	85	48.052	ENSUAMG00000023639	RBM12B	64	48.052	Ursus_americanus
ENSPKIG00000018719	rbm12b	85	48.052	ENSUMAG00000016008	RBM12B	61	48.052	Ursus_maritimus
ENSPKIG00000018719	rbm12b	85	46.753	ENSVVUG00000002694	RBM12B	65	46.753	Vulpes_vulpes
ENSPKIG00000018719	rbm12b	99	37.794	ENSXETG00000014694	rbm12b	100	39.673	Xenopus_tropicalis
ENSPKIG00000018719	rbm12b	74	35.497	ENSXETG00000014696	rbm12b	68	35.497	Xenopus_tropicalis
ENSPKIG00000018719	rbm12b	86	45.706	ENSXCOG00000019735	-	100	47.546	Xiphophorus_couchianus
ENSPKIG00000018719	rbm12b	73	31.641	ENSXCOG00000019654	zgc:153215	98	31.641	Xiphophorus_couchianus
ENSPKIG00000018719	rbm12b	99	48.126	ENSXMAG00000014213	rbm12b	100	49.025	Xiphophorus_maculatus