EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000018888 (Gene tree)
Gene ID: 111836821
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 1688 bases
Position: chrPGUA01000059.1:678307-679994
Accession: 111836821
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000000084	MMR_HSR1	PF01926.23	3.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000023967	-	630	-	ENSPKIP00000000084	209 (aa)	XP_023654185	UPI000CD6698F

Gene Model

Click here to download ENSPKIG00000018888's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000018888's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000018888	si:dkey-16l2.16	91	34.031	ENSPKIG00000014618	-	89	34.031
ENSPKIG00000018888	si:dkey-16l2.16	96	40.594	ENSPKIG00000009825	rab18a	95	40.594
ENSPKIG00000018888	si:dkey-16l2.16	93	55.897	ENSPKIG00000004714	rab1ab	94	56.383
ENSPKIG00000018888	si:dkey-16l2.16	96	37.559	ENSPKIG00000004170	-	97	37.559
ENSPKIG00000018888	si:dkey-16l2.16	74	34.194	ENSPKIG00000024310	rab23	87	33.523
ENSPKIG00000018888	si:dkey-16l2.16	76	31.515	ENSPKIG00000005931	DNAJC27	60	31.515
ENSPKIG00000018888	si:dkey-16l2.16	98	40.385	ENSPKIG00000011640	rab11bb	95	40.385
ENSPKIG00000018888	si:dkey-16l2.16	87	48.901	ENSPKIG00000014528	-	91	48.901
ENSPKIG00000018888	si:dkey-16l2.16	77	45.509	ENSPKIG00000025682	RAB33B	77	45.509
ENSPKIG00000018888	si:dkey-16l2.16	79	30.952	ENSPKIG00000019227	-	70	30.952
ENSPKIG00000018888	si:dkey-16l2.16	80	33.136	ENSPKIG00000000303	HRAS	88	33.136
ENSPKIG00000018888	si:dkey-16l2.16	98	40.385	ENSPKIG00000001389	-	67	40.385
ENSPKIG00000018888	si:dkey-16l2.16	56	34.746	ENSPKIG00000010093	rap2b	93	34.615
ENSPKIG00000018888	si:dkey-16l2.16	99	41.148	ENSPKIG00000015102	-	96	41.148
ENSPKIG00000018888	si:dkey-16l2.16	93	54.359	ENSPKIG00000016450	rab1ba	95	54.359
ENSPKIG00000018888	si:dkey-16l2.16	90	34.021	ENSPKIG00000007864	-	94	34.021
ENSPKIG00000018888	si:dkey-16l2.16	81	42.197	ENSPKIG00000020795	rab39bb	81	42.197
ENSPKIG00000018888	si:dkey-16l2.16	78	33.929	ENSPKIG00000013982	rheb	88	33.929
ENSPKIG00000018888	si:dkey-16l2.16	84	48.295	ENSPKIG00000015202	rab30	87	48.295
ENSPKIG00000018888	si:dkey-16l2.16	91	35.602	ENSPKIG00000024232	-	89	35.602
ENSPKIG00000018888	si:dkey-16l2.16	93	55.897	ENSPKIG00000005049	-	94	56.186
ENSPKIG00000018888	si:dkey-16l2.16	83	48.000	ENSPKIG00000001593	rab15	83	48.000
ENSPKIG00000018888	si:dkey-16l2.16	57	31.707	ENSPKIG00000001594	arl4d	61	31.707
ENSPKIG00000018888	si:dkey-16l2.16	98	41.346	ENSPKIG00000007606	rab11a	95	41.346
ENSPKIG00000018888	si:dkey-16l2.16	79	44.311	ENSPKIG00000020869	rab25a	80	44.311
ENSPKIG00000018888	si:dkey-16l2.16	81	35.795	ENSPKIG00000020212	rab9a	86	35.795
ENSPKIG00000018888	si:dkey-16l2.16	75	43.750	ENSPKIG00000021215	-	75	43.750
ENSPKIG00000018888	si:dkey-16l2.16	96	70.500	ENSPKIG00000025079	rab35b	99	70.500
ENSPKIG00000018888	si:dkey-16l2.16	73	32.911	ENSPKIG00000005039	dnajc27	86	32.911
ENSPKIG00000018888	si:dkey-16l2.16	94	82.143	ENSPKIG00000005686	-	100	79.426
ENSPKIG00000018888	si:dkey-16l2.16	82	35.227	ENSPKIG00000008691	si:dkey-13a21.4	100	33.010
ENSPKIG00000018888	si:dkey-16l2.16	84	42.045	ENSPKIG00000020112	-	80	42.045
ENSPKIG00000018888	si:dkey-16l2.16	77	40.854	ENSPKIG00000004103	rab22a	90	40.854
ENSPKIG00000018888	si:dkey-16l2.16	55	31.034	ENSPKIG00000011377	ARL5B	58	31.034
ENSPKIG00000018888	si:dkey-16l2.16	94	38.278	ENSPKIG00000006906	rab14	95	38.278
ENSPKIG00000018888	si:dkey-16l2.16	89	33.684	ENSPKIG00000006695	rab34a	73	33.684
ENSPKIG00000018888	si:dkey-16l2.16	86	42.541	ENSPKIG00000009578	rab5ab	83	42.541
ENSPKIG00000018888	si:dkey-16l2.16	78	36.310	ENSPKIG00000025312	-	75	36.310
ENSPKIG00000018888	si:dkey-16l2.16	55	31.897	ENSPKIG00000021727	arl5c	62	31.897
ENSPKIG00000018888	si:dkey-16l2.16	77	33.333	ENSPKIG00000019449	KRAS	85	33.333
ENSPKIG00000018888	si:dkey-16l2.16	93	40.404	ENSPKIG00000020893	rab11al	92	40.404
ENSPKIG00000018888	si:dkey-16l2.16	81	42.197	ENSPKIG00000013084	rab33ba	76	42.197
ENSPKIG00000018888	si:dkey-16l2.16	74	46.452	ENSPKIG00000010291	RAB5A	72	46.452
ENSPKIG00000018888	si:dkey-16l2.16	87	34.536	ENSPKIG00000021143	-	94	34.536
ENSPKIG00000018888	si:dkey-16l2.16	73	36.538	ENSPKIG00000021975	rab36	62	36.538
ENSPKIG00000018888	si:dkey-16l2.16	56	30.328	ENSPKIG00000025083	arl8ba	62	30.328
ENSPKIG00000018888	si:dkey-16l2.16	95	33.333	ENSPKIG00000013326	rab34b	79	33.333
ENSPKIG00000018888	si:dkey-16l2.16	91	34.555	ENSPKIG00000018584	rab41	88	34.555
ENSPKIG00000018888	si:dkey-16l2.16	91	44.162	ENSPKIG00000001765	rab33a	82	44.162
ENSPKIG00000018888	si:dkey-16l2.16	73	38.961	ENSPKIG00000003261	-	74	38.961
ENSPKIG00000018888	si:dkey-16l2.16	85	33.333	ENSPKIG00000009416	nras	94	33.333
ENSPKIG00000018888	si:dkey-16l2.16	80	33.136	ENSPKIG00000013507	hrasb	88	33.136
ENSPKIG00000018888	si:dkey-16l2.16	76	46.541	ENSPKIG00000005764	RAB2A	83	46.795
ENSPKIG00000018888	si:dkey-16l2.16	81	30.000	ENSPKIG00000025372	rabl2	75	30.000
ENSPKIG00000018888	si:dkey-16l2.16	55	33.333	ENSPKIG00000006104	arfrp1	58	33.333
ENSPKIG00000018888	si:dkey-16l2.16	80	35.673	ENSPKIG00000015234	-	82	35.673
ENSPKIG00000018888	si:dkey-16l2.16	79	41.317	ENSPKIG00000001237	-	77	41.317
ENSPKIG00000018888	si:dkey-16l2.16	79	46.707	ENSPKIG00000009021	rab3db	76	46.707
ENSPKIG00000018888	si:dkey-16l2.16	85	43.646	ENSPKIG00000013397	zgc:101559	76	43.646
ENSPKIG00000018888	si:dkey-16l2.16	80	34.682	ENSPKIG00000014623	rab9b	78	34.682
ENSPKIG00000018888	si:dkey-16l2.16	82	41.040	ENSPKIG00000008579	rab12	76	39.344
ENSPKIG00000018888	si:dkey-16l2.16	98	40.952	ENSPKIG00000011703	-	95	40.385
ENSPKIG00000018888	si:dkey-16l2.16	91	54.688	ENSPKIG00000003902	RAB1B	88	54.688
ENSPKIG00000018888	si:dkey-16l2.16	73	45.513	ENSPKIG00000025667	-	73	45.513
ENSPKIG00000018888	si:dkey-16l2.16	83	30.682	ENSPKIG00000002719	si:cabz01085950.1	87	30.682
ENSPKIG00000018888	si:dkey-16l2.16	77	32.099	ENSPKIG00000025491	-	98	30.108
ENSPKIG00000018888	si:dkey-16l2.16	76	46.541	ENSPKIG00000009739	rab2a	75	46.541
ENSPKIG00000018888	si:dkey-16l2.16	90	73.545	ENSPKIG00000016213	-	99	69.307
ENSPKIG00000018888	si:dkey-16l2.16	94	33.173	ENSPKIG00000021209	si:dkey-34d22.5	93	33.173

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000018888	si:dkey-16l2.16	94	82.653	ENSAPOG00000008263	si:dkey-16l2.16	100	79.904	Acanthochromis_polyacanthus
ENSPKIG00000018888	si:dkey-16l2.16	94	82.653	ENSAOCG00000016825	si:dkey-16l2.16	100	79.904	Amphiprion_ocellaris
ENSPKIG00000018888	si:dkey-16l2.16	94	82.653	ENSAPEG00000006500	si:dkey-16l2.16	100	79.904	Amphiprion_percula
ENSPKIG00000018888	si:dkey-16l2.16	100	79.904	ENSATEG00000019238	si:dkey-16l2.16	100	79.904	Anabas_testudineus
ENSPKIG00000018888	si:dkey-16l2.16	94	82.143	ENSACLG00000018721	si:dkey-16l2.16	100	79.426	Astatotilapia_calliptera
ENSPKIG00000018888	si:dkey-16l2.16	94	84.184	ENSAMXG00000038243	si:dkey-16l2.16	94	93.220	Astyanax_mexicanus
ENSPKIG00000018888	si:dkey-16l2.16	56	91.525	ENSCSEG00000009988	si:dkey-16l2.16	90	91.525	Cynoglossus_semilaevis
ENSPKIG00000018888	si:dkey-16l2.16	94	81.633	ENSCVAG00000003537	si:dkey-16l2.16	100	78.947	Cyprinodon_variegatus
ENSPKIG00000018888	si:dkey-16l2.16	100	82.297	ENSDARG00000037967	si:dkey-16l2.16	99	92.373	Danio_rerio
ENSPKIG00000018888	si:dkey-16l2.16	99	79.327	ENSELUG00000023247	si:dkey-16l2.16	98	79.327	Esox_lucius
ENSPKIG00000018888	si:dkey-16l2.16	58	91.736	ENSFHEG00000000767	si:dkey-16l2.16	78	91.736	Fundulus_heteroclitus
ENSPKIG00000018888	si:dkey-16l2.16	77	79.503	ENSGMOG00000015174	si:dkey-16l2.16	98	79.503	Gadus_morhua
ENSPKIG00000018888	si:dkey-16l2.16	100	75.598	ENSGAFG00000005388	si:dkey-16l2.16	100	75.598	Gambusia_affinis
ENSPKIG00000018888	si:dkey-16l2.16	94	82.653	ENSGACG00000014915	si:dkey-16l2.16	98	79.426	Gasterosteus_aculeatus
ENSPKIG00000018888	si:dkey-16l2.16	94	82.653	ENSHBUG00000019261	si:dkey-16l2.16	100	79.904	Haplochromis_burtoni
ENSPKIG00000018888	si:dkey-16l2.16	100	79.426	ENSHCOG00000006538	si:dkey-16l2.16	100	79.426	Hippocampus_comes
ENSPKIG00000018888	si:dkey-16l2.16	94	79.082	ENSKMAG00000003494	si:dkey-16l2.16	100	76.555	Kryptolebias_marmoratus
ENSPKIG00000018888	si:dkey-16l2.16	94	83.163	ENSLBEG00000007681	si:dkey-16l2.16	100	80.383	Labrus_bergylta
ENSPKIG00000018888	si:dkey-16l2.16	100	78.947	ENSMAMG00000019230	si:dkey-16l2.16	100	78.947	Mastacembelus_armatus
ENSPKIG00000018888	si:dkey-16l2.16	94	82.143	ENSMZEG00005002081	si:dkey-16l2.16	100	79.426	Maylandia_zebra
ENSPKIG00000018888	si:dkey-16l2.16	92	82.383	ENSMMOG00000020140	si:dkey-16l2.16	97	79.612	Mola_mola
ENSPKIG00000018888	si:dkey-16l2.16	100	78.469	ENSMALG00000014727	si:dkey-16l2.16	99	78.469	Monopterus_albus
ENSPKIG00000018888	si:dkey-16l2.16	94	82.143	ENSNBRG00000008930	si:dkey-16l2.16	100	79.426	Neolamprologus_brichardi
ENSPKIG00000018888	si:dkey-16l2.16	94	82.653	ENSONIG00000009443	si:dkey-16l2.16	100	79.426	Oreochromis_niloticus
ENSPKIG00000018888	si:dkey-16l2.16	100	77.033	ENSORLG00000001098	si:dkey-16l2.16	99	77.033	Oryzias_latipes
ENSPKIG00000018888	si:dkey-16l2.16	100	77.033	ENSORLG00020000867	si:dkey-16l2.16	99	77.033	Oryzias_latipes_hni
ENSPKIG00000018888	si:dkey-16l2.16	85	85.311	ENSOMEG00000015474	si:dkey-16l2.16	100	77.512	Oryzias_melastigma
ENSPKIG00000018888	si:dkey-16l2.16	94	82.143	ENSPMGG00000000751	si:dkey-16l2.16	100	79.426	Periophthalmus_magnuspinnatus
ENSPKIG00000018888	si:dkey-16l2.16	100	76.077	ENSPFOG00000004746	si:dkey-16l2.16	100	76.077	Poecilia_formosa
ENSPKIG00000018888	si:dkey-16l2.16	100	76.077	ENSPLAG00000021043	si:dkey-16l2.16	100	76.077	Poecilia_latipinna
ENSPKIG00000018888	si:dkey-16l2.16	100	76.077	ENSPMEG00000007165	si:dkey-16l2.16	100	76.077	Poecilia_mexicana
ENSPKIG00000018888	si:dkey-16l2.16	100	76.077	ENSPREG00000005323	si:dkey-16l2.16	100	76.077	Poecilia_reticulata
ENSPKIG00000018888	si:dkey-16l2.16	94	82.653	ENSPNYG00000009490	si:dkey-16l2.16	100	79.904	Pundamilia_nyererei
ENSPKIG00000018888	si:dkey-16l2.16	94	84.184	ENSPNAG00000018986	si:dkey-16l2.16	100	81.340	Pygocentrus_nattereri
ENSPKIG00000018888	si:dkey-16l2.16	100	81.818	ENSSFOG00015021448	-	100	81.818	Scleropages_formosus
ENSPKIG00000018888	si:dkey-16l2.16	99	76.699	ENSSFOG00015006414	-	98	76.699	Scleropages_formosus
ENSPKIG00000018888	si:dkey-16l2.16	100	77.033	ENSSMAG00000011769	si:dkey-16l2.16	94	77.033	Scophthalmus_maximus
ENSPKIG00000018888	si:dkey-16l2.16	94	82.143	ENSSDUG00000005719	si:dkey-16l2.16	100	79.426	Seriola_dumerili
ENSPKIG00000018888	si:dkey-16l2.16	94	82.143	ENSSLDG00000003631	si:dkey-16l2.16	100	79.426	Seriola_lalandi_dorsalis
ENSPKIG00000018888	si:dkey-16l2.16	94	83.673	ENSSPAG00000006302	si:dkey-16l2.16	100	80.861	Stegastes_partitus
ENSPKIG00000018888	si:dkey-16l2.16	94	83.163	ENSTRUG00000025076	si:dkey-16l2.16	94	94.118	Takifugu_rubripes
ENSPKIG00000018888	si:dkey-16l2.16	94	82.143	ENSTNIG00000011300	si:dkey-16l2.16	100	79.426	Tetraodon_nigroviridis
ENSPKIG00000018888	si:dkey-16l2.16	100	75.598	ENSXMAG00000021767	si:dkey-16l2.16	100	75.598	Xiphophorus_maculatus