EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000018890 (Gene tree)
Gene ID: 111849280
Gene Symbol: rpusd1
Alias: -
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 6216 bases
Position: chrPGUA01000020.1:3098373-3104588
Accession: ZDB-GENE-060929-444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000000085	PseudoU_synth_2	PF00849.22	3.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000023968	-	4695	-	ENSPKIP00000000085	333 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000018890's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000018890's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000018890	rpusd1	91	58.544	ENSG00000007376	RPUSD1	100	69.048	Homo_sapiens
ENSPKIG00000018890	rpusd1	91	70.358	ENSAPOG00000022221	rpusd1	99	70.261	Acanthochromis_polyacanthus
ENSPKIG00000018890	rpusd1	91	60.984	ENSAMEG00000007461	RPUSD1	99	60.984	Ailuropoda_melanoleuca
ENSPKIG00000018890	rpusd1	91	66.773	ENSACIG00000015863	rpusd1	100	68.065	Amphilophus_citrinellus
ENSPKIG00000018890	rpusd1	93	69.811	ENSAOCG00000021975	rpusd1	99	69.811	Amphiprion_ocellaris
ENSPKIG00000018890	rpusd1	93	69.811	ENSAPEG00000001316	rpusd1	99	69.811	Amphiprion_percula
ENSPKIG00000018890	rpusd1	91	67.638	ENSATEG00000002984	rpusd1	99	67.961	Anabas_testudineus
ENSPKIG00000018890	rpusd1	71	64.286	ENSAPLG00000012316	RPUSD1	98	64.286	Anas_platyrhynchos
ENSPKIG00000018890	rpusd1	90	67.550	ENSACAG00000008953	RPUSD1	99	67.550	Anolis_carolinensis
ENSPKIG00000018890	rpusd1	91	59.295	ENSANAG00000024709	RPUSD1	99	59.936	Aotus_nancymaae
ENSPKIG00000018890	rpusd1	91	65.938	ENSACLG00000013692	rpusd1	100	67.846	Astatotilapia_calliptera
ENSPKIG00000018890	rpusd1	91	69.180	ENSAMXG00000019802	rpusd1	100	69.180	Astyanax_mexicanus
ENSPKIG00000018890	rpusd1	91	60.772	ENSBTAG00000000179	RPUSD1	99	61.538	Bos_taurus
ENSPKIG00000018890	rpusd1	91	58.974	ENSCJAG00000012253	RPUSD1	99	59.677	Callithrix_jacchus
ENSPKIG00000018890	rpusd1	91	60.855	ENSCAFG00000019614	RPUSD1	99	60.855	Canis_familiaris
ENSPKIG00000018890	rpusd1	91	60.855	ENSCAFG00020008891	RPUSD1	99	60.855	Canis_lupus_dingo
ENSPKIG00000018890	rpusd1	91	61.415	ENSCHIG00000012872	RPUSD1	99	61.859	Capra_hircus
ENSPKIG00000018890	rpusd1	91	60.912	ENSTSYG00000036934	RPUSD1	99	60.912	Carlito_syrichta
ENSPKIG00000018890	rpusd1	91	59.615	ENSCAPG00000014219	RPUSD1	99	59.615	Cavia_aperea
ENSPKIG00000018890	rpusd1	91	59.615	ENSCPOG00000034604	RPUSD1	99	59.615	Cavia_porcellus
ENSPKIG00000018890	rpusd1	91	59.164	ENSCCAG00000034385	RPUSD1	99	59.807	Cebus_capucinus
ENSPKIG00000018890	rpusd1	91	59.164	ENSCATG00000042983	RPUSD1	99	59.547	Cercocebus_atys
ENSPKIG00000018890	rpusd1	91	60.855	ENSCLAG00000013966	RPUSD1	99	60.855	Chinchilla_lanigera
ENSPKIG00000018890	rpusd1	91	59.164	ENSCSAG00000012121	RPUSD1	99	59.547	Chlorocebus_sabaeus
ENSPKIG00000018890	rpusd1	90	67.550	ENSCPBG00000021101	RPUSD1	99	67.550	Chrysemys_picta_bellii
ENSPKIG00000018890	rpusd1	76	65.748	ENSCANG00000028576	RPUSD1	79	78.641	Colobus_angolensis_palliatus
ENSPKIG00000018890	rpusd1	91	60.458	ENSCGRG00001014253	Rpusd1	99	60.458	Cricetulus_griseus_chok1gshd
ENSPKIG00000018890	rpusd1	91	60.458	ENSCGRG00000017995	Rpusd1	99	60.458	Cricetulus_griseus_crigri
ENSPKIG00000018890	rpusd1	91	69.205	ENSCSEG00000018512	rpusd1	100	69.205	Cynoglossus_semilaevis
ENSPKIG00000018890	rpusd1	91	69.408	ENSCVAG00000022746	rpusd1	100	69.408	Cyprinodon_variegatus
ENSPKIG00000018890	rpusd1	91	75.497	ENSDARG00000060192	rpusd1	100	75.497	Danio_rerio
ENSPKIG00000018890	rpusd1	91	60.912	ENSDNOG00000003721	RPUSD1	99	61.688	Dasypus_novemcinctus
ENSPKIG00000018890	rpusd1	91	59.539	ENSDORG00000026656	Rpusd1	99	60.526	Dipodomys_ordii
ENSPKIG00000018890	rpusd1	91	49.686	ENSEBUG00000008767	rpusd1	93	50.482	Eptatretus_burgeri
ENSPKIG00000018890	rpusd1	91	57.812	ENSEASG00005018421	RPUSD1	75	59.873	Equus_asinus_asinus
ENSPKIG00000018890	rpusd1	93	67.197	ENSELUG00000014307	rpusd1	91	65.732	Esox_lucius
ENSPKIG00000018890	rpusd1	91	61.311	ENSFCAG00000010359	RPUSD1	99	61.311	Felis_catus
ENSPKIG00000018890	rpusd1	91	68.543	ENSFALG00000003211	RPUSD1	100	68.543	Ficedula_albicollis
ENSPKIG00000018890	rpusd1	91	60.000	ENSFDAG00000013398	RPUSD1	99	60.000	Fukomys_damarensis
ENSPKIG00000018890	rpusd1	91	66.450	ENSFHEG00000004736	rpusd1	100	68.078	Fundulus_heteroclitus
ENSPKIG00000018890	rpusd1	77	74.319	ENSGMOG00000010756	rpusd1	99	67.320	Gadus_morhua
ENSPKIG00000018890	rpusd1	91	69.307	ENSGALG00000005315	RPUSD1	100	69.307	Gallus_gallus
ENSPKIG00000018890	rpusd1	91	69.408	ENSGAFG00000009886	rpusd1	100	69.408	Gambusia_affinis
ENSPKIG00000018890	rpusd1	90	69.408	ENSGACG00000014276	rpusd1	98	70.395	Gasterosteus_aculeatus
ENSPKIG00000018890	rpusd1	90	66.556	ENSGAGG00000004181	RPUSD1	99	66.556	Gopherus_agassizii
ENSPKIG00000018890	rpusd1	91	59.177	ENSGGOG00000013997	RPUSD1	99	60.703	Gorilla_gorilla
ENSPKIG00000018890	rpusd1	91	66.250	ENSHBUG00000023728	rpusd1	100	68.167	Haplochromis_burtoni
ENSPKIG00000018890	rpusd1	91	60.855	ENSHGLG00000002595	RPUSD1	99	60.855	Heterocephalus_glaber_female
ENSPKIG00000018890	rpusd1	91	60.855	ENSHGLG00100014303	RPUSD1	99	60.855	Heterocephalus_glaber_male
ENSPKIG00000018890	rpusd1	91	68.954	ENSHCOG00000002390	rpusd1	100	68.954	Hippocampus_comes
ENSPKIG00000018890	rpusd1	90	68.874	ENSIPUG00000001570	rpusd1	99	68.874	Ictalurus_punctatus
ENSPKIG00000018890	rpusd1	91	58.974	ENSSTOG00000004276	RPUSD1	99	58.974	Ictidomys_tridecemlineatus
ENSPKIG00000018890	rpusd1	91	60.855	ENSJJAG00000015696	Rpusd1	99	60.645	Jaculus_jaculus
ENSPKIG00000018890	rpusd1	89	69.128	ENSKMAG00000017287	rpusd1	98	69.128	Kryptolebias_marmoratus
ENSPKIG00000018890	rpusd1	91	67.638	ENSLBEG00000013354	RPUSD1	99	67.961	Labrus_bergylta
ENSPKIG00000018890	rpusd1	91	67.638	ENSLBEG00000022502	rpusd1	99	67.961	Labrus_bergylta
ENSPKIG00000018890	rpusd1	91	66.885	ENSLACG00000008869	RPUSD1	99	66.885	Latimeria_chalumnae
ENSPKIG00000018890	rpusd1	65	87.558	ENSLOCG00000005682	rpusd1	100	87.558	Lepisosteus_oculatus
ENSPKIG00000018890	rpusd1	91	59.344	ENSLAFG00000002115	RPUSD1	99	59.344	Loxodonta_africana
ENSPKIG00000018890	rpusd1	91	58.095	ENSMFAG00000003961	RPUSD1	99	59.547	Macaca_fascicularis
ENSPKIG00000018890	rpusd1	91	58.095	ENSMMUG00000000842	RPUSD1	99	59.547	Macaca_mulatta
ENSPKIG00000018890	rpusd1	91	58.095	ENSMNEG00000042712	RPUSD1	99	59.547	Macaca_nemestrina
ENSPKIG00000018890	rpusd1	91	58.095	ENSMLEG00000030591	RPUSD1	99	59.547	Mandrillus_leucophaeus
ENSPKIG00000018890	rpusd1	91	69.132	ENSMAMG00000004735	rpusd1	99	69.355	Mastacembelus_armatus
ENSPKIG00000018890	rpusd1	91	65.938	ENSMZEG00005003214	rpusd1	100	67.846	Maylandia_zebra
ENSPKIG00000018890	rpusd1	89	68.896	ENSMGAG00000005447	RPUSD1	100	68.896	Meleagris_gallopavo
ENSPKIG00000018890	rpusd1	76	59.055	ENSMAUG00000019998	Rpusd1	97	59.055	Mesocricetus_auratus
ENSPKIG00000018890	rpusd1	91	59.672	ENSMICG00000017561	RPUSD1	99	59.804	Microcebus_murinus
ENSPKIG00000018890	rpusd1	91	59.539	ENSMOCG00000014082	Rpusd1	99	58.974	Microtus_ochrogaster
ENSPKIG00000018890	rpusd1	91	69.508	ENSMMOG00000012569	rpusd1	100	70.588	Mola_mola
ENSPKIG00000018890	rpusd1	91	65.789	ENSMODG00000016882	RPUSD1	99	65.789	Monodelphis_domestica
ENSPKIG00000018890	rpusd1	91	68.387	ENSMALG00000017818	rpusd1	99	69.132	Monopterus_albus
ENSPKIG00000018890	rpusd1	91	59.868	MGP_CAROLIEiJ_G0021244	Rpusd1	99	60.645	Mus_caroli
ENSPKIG00000018890	rpusd1	91	59.871	ENSMUSG00000041199	Rpusd1	99	59.871	Mus_musculus
ENSPKIG00000018890	rpusd1	91	59.032	MGP_PahariEiJ_G0023562	Rpusd1	99	60.000	Mus_pahari
ENSPKIG00000018890	rpusd1	91	59.871	MGP_SPRETEiJ_G0022155	Rpusd1	99	59.871	Mus_spretus
ENSPKIG00000018890	rpusd1	91	59.211	ENSMPUG00000015897	RPUSD1	99	59.539	Mustela_putorius_furo
ENSPKIG00000018890	rpusd1	91	60.129	ENSMLUG00000001089	RPUSD1	99	60.772	Myotis_lucifugus
ENSPKIG00000018890	rpusd1	91	60.197	ENSNGAG00000003595	Rpusd1	99	61.364	Nannospalax_galili
ENSPKIG00000018890	rpusd1	91	68.750	ENSNBRG00000006457	rpusd1	100	68.750	Neolamprologus_brichardi
ENSPKIG00000018890	rpusd1	50	50.857	ENSNLEG00000008424	-	98	52.571	Nomascus_leucogenys
ENSPKIG00000018890	rpusd1	91	66.225	ENSMEUG00000016049	RPUSD1	99	66.225	Notamacropus_eugenii
ENSPKIG00000018890	rpusd1	91	54.934	ENSOPRG00000008340	RPUSD1	99	54.934	Ochotona_princeps
ENSPKIG00000018890	rpusd1	91	60.390	ENSODEG00000016945	RPUSD1	99	60.390	Octodon_degus
ENSPKIG00000018890	rpusd1	90	66.877	ENSONIG00000015672	rpusd1	100	68.831	Oreochromis_niloticus
ENSPKIG00000018890	rpusd1	91	67.763	ENSORLG00000013009	rpusd1	99	67.763	Oryzias_latipes
ENSPKIG00000018890	rpusd1	91	67.763	ENSORLG00020010382	rpusd1	99	67.763	Oryzias_latipes_hni
ENSPKIG00000018890	rpusd1	91	66.776	ENSORLG00015021354	rpusd1	99	66.776	Oryzias_latipes_hsok
ENSPKIG00000018890	rpusd1	91	68.750	ENSOMEG00000021426	rpusd1	99	68.750	Oryzias_melastigma
ENSPKIG00000018890	rpusd1	91	58.360	ENSOGAG00000003795	RPUSD1	99	59.936	Otolemur_garnettii
ENSPKIG00000018890	rpusd1	91	61.093	ENSOARG00000014254	RPUSD1	99	61.859	Ovis_aries
ENSPKIG00000018890	rpusd1	91	58.544	ENSPPAG00000034797	RPUSD1	99	60.064	Pan_paniscus
ENSPKIG00000018890	rpusd1	91	61.311	ENSPPRG00000012389	RPUSD1	99	61.311	Panthera_pardus
ENSPKIG00000018890	rpusd1	93	60.703	ENSPTIG00000008545	RPUSD1	78	77.670	Panthera_tigris_altaica
ENSPKIG00000018890	rpusd1	91	58.544	ENSPTRG00000007565	RPUSD1	99	60.064	Pan_troglodytes
ENSPKIG00000018890	rpusd1	91	58.095	ENSPANG00000024401	RPUSD1	99	59.547	Papio_anubis
ENSPKIG00000018890	rpusd1	91	68.627	ENSPSIG00000013945	RPUSD1	100	68.627	Pelodiscus_sinensis
ENSPKIG00000018890	rpusd1	91	68.197	ENSPMGG00000014950	rpusd1	99	68.197	Periophthalmus_magnuspinnatus
ENSPKIG00000018890	rpusd1	91	60.518	ENSPEMG00000000497	Rpusd1	99	59.936	Peromyscus_maniculatus_bairdii
ENSPKIG00000018890	rpusd1	76	61.417	ENSPMAG00000001563	rpusd1	100	54.369	Petromyzon_marinus
ENSPKIG00000018890	rpusd1	91	66.776	ENSPCIG00000021216	-	93	66.776	Phascolarctos_cinereus
ENSPKIG00000018890	rpusd1	91	69.408	ENSPFOG00000007946	rpusd1	100	69.408	Poecilia_formosa
ENSPKIG00000018890	rpusd1	91	69.408	ENSPLAG00000011925	rpusd1	100	69.408	Poecilia_latipinna
ENSPKIG00000018890	rpusd1	91	69.408	ENSPMEG00000002910	rpusd1	100	69.408	Poecilia_mexicana
ENSPKIG00000018890	rpusd1	91	69.079	ENSPREG00000019851	rpusd1	100	69.079	Poecilia_reticulata
ENSPKIG00000018890	rpusd1	91	47.097	ENSPCAG00000002258	RPUSD1	99	47.097	Procavia_capensis
ENSPKIG00000018890	rpusd1	91	57.862	ENSPCOG00000022582	RPUSD1	99	59.295	Propithecus_coquereli
ENSPKIG00000018890	rpusd1	91	57.556	ENSPVAG00000013104	RPUSD1	99	57.827	Pteropus_vampyrus
ENSPKIG00000018890	rpusd1	91	68.421	ENSPNYG00000024076	rpusd1	100	68.750	Pundamilia_nyererei
ENSPKIG00000018890	rpusd1	91	67.219	ENSPNAG00000013806	rpusd1	100	67.219	Pygocentrus_nattereri
ENSPKIG00000018890	rpusd1	91	59.871	ENSRNOG00000023639	Rpusd1	99	59.871	Rattus_norvegicus
ENSPKIG00000018890	rpusd1	91	58.413	ENSRBIG00000030238	RPUSD1	99	59.936	Rhinopithecus_bieti
ENSPKIG00000018890	rpusd1	91	58.413	ENSRROG00000036663	RPUSD1	99	59.936	Rhinopithecus_roxellana
ENSPKIG00000018890	rpusd1	91	60.656	ENSSBOG00000033063	RPUSD1	99	61.311	Saimiri_boliviensis_boliviensis
ENSPKIG00000018890	rpusd1	91	66.225	ENSSHAG00000013500	RPUSD1	99	66.225	Sarcophilus_harrisii
ENSPKIG00000018890	rpusd1	90	79.070	ENSSFOG00015014394	rpusd1	99	79.070	Scleropages_formosus
ENSPKIG00000018890	rpusd1	91	69.032	ENSSMAG00000008045	rpusd1	93	69.579	Scophthalmus_maximus
ENSPKIG00000018890	rpusd1	80	75.940	ENSSDUG00000001829	rpusd1	99	69.497	Seriola_dumerili
ENSPKIG00000018890	rpusd1	80	75.940	ENSSLDG00000020853	rpusd1	99	69.497	Seriola_lalandi_dorsalis
ENSPKIG00000018890	rpusd1	50	70.659	ENSSARG00000011187	-	100	70.659	Sorex_araneus
ENSPKIG00000018890	rpusd1	57	61.053	ENSSPUG00000005119	-	99	61.053	Sphenodon_punctatus
ENSPKIG00000018890	rpusd1	91	70.227	ENSSPAG00000012708	rpusd1	99	70.645	Stegastes_partitus
ENSPKIG00000018890	rpusd1	91	61.661	ENSSSCG00000008000	RPUSD1	99	68.605	Sus_scrofa
ENSPKIG00000018890	rpusd1	76	75.397	ENSTGUG00000015375	RPUSD1	99	75.397	Taeniopygia_guttata
ENSPKIG00000018890	rpusd1	91	67.314	ENSTRUG00000003041	rpusd1	99	67.638	Takifugu_rubripes
ENSPKIG00000018890	rpusd1	90	65.886	ENSTNIG00000002660	rpusd1	99	65.886	Tetraodon_nigroviridis
ENSPKIG00000018890	rpusd1	91	60.645	ENSTTRG00000010167	RPUSD1	99	60.897	Tursiops_truncatus
ENSPKIG00000018890	rpusd1	91	60.855	ENSUAMG00000012736	RPUSD1	99	60.855	Ursus_americanus
ENSPKIG00000018890	rpusd1	91	60.855	ENSUMAG00000021174	RPUSD1	95	65.267	Ursus_maritimus
ENSPKIG00000018890	rpusd1	91	61.513	ENSVVUG00000012357	RPUSD1	99	61.513	Vulpes_vulpes
ENSPKIG00000018890	rpusd1	91	66.885	ENSXETG00000007184	rpusd1	99	66.885	Xenopus_tropicalis
ENSPKIG00000018890	rpusd1	91	69.079	ENSXCOG00000017930	rpusd1	100	69.079	Xiphophorus_couchianus
ENSPKIG00000018890	rpusd1	91	69.408	ENSXMAG00000024084	rpusd1	100	69.408	Xiphophorus_maculatus