EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000018991 (Gene tree)
Gene ID: 111834458
Gene Symbol: gar1
Alias: -
Full Name: GAR1 homolog%2C ribonucleoprotein
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 6029 bases
Position: chrPGUA01000484.1:249946-255974
Accession: ZDB-GENE-040426-893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000000250	Gar1	PF04410.14	7.5e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000024137	-	672	-	ENSPKIP00000000250	223 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000018991's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000018991's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000018991	gar1	65	86.111	ENSG00000109534	GAR1	77	74.251	Homo_sapiens
ENSPKIG00000018991	gar1	61	84.672	ENSAMEG00000004605	GAR1	52	92.453	Ailuropoda_melanoleuca
ENSPKIG00000018991	gar1	61	86.131	ENSBTAG00000000748	GAR1	50	93.396	Bos_taurus
ENSPKIG00000018991	gar1	63	85.000	ENSCHIG00000016026	-	51	93.396	Capra_hircus
ENSPKIG00000018991	gar1	79	88.321	ENSTSYG00000013668	-	89	85.385	Carlito_syrichta
ENSPKIG00000018991	gar1	66	85.034	ENSCATG00000021854	GAR1	84	73.653	Cercocebus_atys
ENSPKIG00000018991	gar1	66	84.354	ENSCANG00000039262	GAR1	71	71.895	Colobus_angolensis_palliatus
ENSPKIG00000018991	gar1	63	86.525	ENSDORG00000000482	Gar1	77	76.190	Dipodomys_ordii
ENSPKIG00000018991	gar1	63	86.429	ENSECAG00000013624	GAR1	54	93.396	Equus_caballus
ENSPKIG00000018991	gar1	61	87.591	ENSFCAG00000040791	-	51	93.396	Felis_catus
ENSPKIG00000018991	gar1	65	86.806	ENSGGOG00000008681	GAR1	77	74.850	Gorilla_gorilla
ENSPKIG00000018991	gar1	61	88.321	ENSHGLG00000000493	GAR1	71	98.148	Heterocephalus_glaber_female
ENSPKIG00000018991	gar1	57	81.250	ENSLACG00000003306	GAR1	63	91.346	Latimeria_chalumnae
ENSPKIG00000018991	gar1	66	85.034	ENSMFAG00000024592	GAR1	77	73.653	Macaca_fascicularis
ENSPKIG00000018991	gar1	66	85.034	ENSMMUG00000021225	GAR1	77	73.653	Macaca_mulatta
ENSPKIG00000018991	gar1	66	85.034	ENSMNEG00000042594	GAR1	77	73.653	Macaca_nemestrina
ENSPKIG00000018991	gar1	66	85.034	ENSMLEG00000002496	GAR1	77	73.653	Mandrillus_leucophaeus
ENSPKIG00000018991	gar1	61	89.051	ENSMMOG00000004156	gar1	52	95.283	Mola_mola
ENSPKIG00000018991	gar1	61	87.591	ENSMPUG00000008615	GAR1	51	93.396	Mustela_putorius_furo
ENSPKIG00000018991	gar1	65	85.417	ENSOCUG00000003901	GAR1	76	76.829	Oryctolagus_cuniculus
ENSPKIG00000018991	gar1	61	87.591	ENSOGAG00000004693	GAR1	77	76.829	Otolemur_garnettii
ENSPKIG00000018991	gar1	61	86.131	ENSOARG00000004910	GAR1	50	93.396	Ovis_aries
ENSPKIG00000018991	gar1	61	87.591	ENSPPRG00000023697	GAR1	51	93.396	Panthera_pardus
ENSPKIG00000018991	gar1	61	87.591	ENSPTIG00000021565	GAR1	51	93.396	Panthera_tigris_altaica
ENSPKIG00000018991	gar1	66	85.034	ENSPTRG00000016364	GAR1	84	74.251	Pan_troglodytes
ENSPKIG00000018991	gar1	66	85.034	ENSPANG00000000639	GAR1	77	74.251	Papio_anubis
ENSPKIG00000018991	gar1	65	85.417	ENSPPYG00000014996	GAR1	77	74.251	Pongo_abelii
ENSPKIG00000018991	gar1	65	86.111	ENSRBIG00000019547	GAR1	84	73.653	Rhinopithecus_bieti
ENSPKIG00000018991	gar1	50	75.000	ENSRBIG00000042411	-	71	62.500	Rhinopithecus_bieti
ENSPKIG00000018991	gar1	66	85.034	ENSRROG00000028454	GAR1	84	73.653	Rhinopithecus_roxellana
ENSPKIG00000018991	gar1	50	75.000	ENSRROG00000044348	-	70	62.500	Rhinopithecus_roxellana
ENSPKIG00000018991	gar1	57	85.156	ENSSPUG00000008707	GAR1	59	93.333	Sphenodon_punctatus
ENSPKIG00000018991	gar1	63	86.429	ENSSSCG00000009137	GAR1	52	93.396	Sus_scrofa
ENSPKIG00000018991	gar1	61	87.591	ENSUMAG00000000776	GAR1	51	93.396	Ursus_maritimus