EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Description

Ensembl ID: ENSPKIG00000019150 (Gene tree)
Gene ID: 111850626
Gene Symbol: adamts2
Alias: -
Full Name: CCR4-NOT transcription complex subunit 6-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 80014 bases
Position: chrPGUA01000103.1:1505478-1585491
Accession: 111850626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000000632	Exo_endo_phos	PF03372.23	4.5e-17	1	1
ENSPKIP00000000575	Exo_endo_phos	PF03372.23	4.6e-17	1	1
ENSPKIP00000000607	Exo_endo_phos	PF03372.23	6.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000024505	-	6299	-	ENSPKIP00000000607	649 (aa)	-	-
ENSPKIT00000024530	-	6221	XM_023824710	ENSPKIP00000000632	623 (aa)	XP_023680478	-
ENSPKIT00000024455	-	3663	-	ENSPKIP00000000557	1220 (aa)	-	-
ENSPKIT00000024473	-	1938	-	ENSPKIP00000000575	625 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000019150's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000019150's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000019150	adamts2	89	89.427	ENSPKIG00000021368	cnot6b	100	89.427
ENSPKIG00000019150	adamts2	89	73.609	ENSPKIG00000002892	cnot6l	100	73.609