EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000019213 (Gene tree)
Gene ID: 111848012
Gene Symbol: ddb1
Alias: -
Full Name: damage-specific DNA binding protein 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 14396 bases
Position: chrPGUA01000175.1:640362-654757
Accession: ZDB-GENE-040426-1272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000000663	CPSF_A	PF03178.15	1.3e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000024561	-	4116	-	ENSPKIP00000000663	1142 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000019213's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03420	Nucleotide excision repair	KEGG
pki04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000019213's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000019213	ddb1	94	91.240	ENSG00000167986	DDB1	100	97.260	Homo_sapiens
ENSPKIG00000019213	ddb1	94	96.365	ENSAPOG00000005036	ddb1	99	96.327	Acanthochromis_polyacanthus
ENSPKIG00000019213	ddb1	94	91.333	ENSAMEG00000016518	DDB1	94	91.333	Ailuropoda_melanoleuca
ENSPKIG00000019213	ddb1	86	95.918	ENSACIG00000020624	ddb1	99	95.918	Amphilophus_citrinellus
ENSPKIG00000019213	ddb1	94	96.459	ENSAOCG00000003066	ddb1	94	96.459	Amphiprion_ocellaris
ENSPKIG00000019213	ddb1	94	96.558	ENSAPEG00000000092	ddb1	99	96.558	Amphiprion_percula
ENSPKIG00000019213	ddb1	95	95.945	ENSATEG00000020571	ddb1	98	95.945	Anabas_testudineus
ENSPKIG00000019213	ddb1	93	90.274	ENSAPLG00000007174	DDB1	93	90.274	Anas_platyrhynchos
ENSPKIG00000019213	ddb1	94	91.146	ENSACAG00000017758	DDB1	94	91.146	Anolis_carolinensis
ENSPKIG00000019213	ddb1	94	91.240	ENSANAG00000021878	DDB1	94	91.240	Aotus_nancymaae
ENSPKIG00000019213	ddb1	94	95.993	ENSACLG00000012401	ddb1	99	95.302	Astatotilapia_calliptera
ENSPKIG00000019213	ddb1	94	91.240	ENSBTAG00000021569	DDB1	88	91.240	Bos_taurus
ENSPKIG00000019213	ddb1	94	37.296	WBGene00010890	ddb-1	94	37.284	Caenorhabditis_elegans
ENSPKIG00000019213	ddb1	94	91.240	ENSCJAG00000019319	DDB1	94	91.240	Callithrix_jacchus
ENSPKIG00000019213	ddb1	95	90.859	ENSCAFG00000016264	DDB1	99	90.859	Canis_familiaris
ENSPKIG00000019213	ddb1	95	90.859	ENSCAFG00020012722	DDB1	99	90.859	Canis_lupus_dingo
ENSPKIG00000019213	ddb1	94	91.240	ENSCHIG00000014969	DDB1	94	91.240	Capra_hircus
ENSPKIG00000019213	ddb1	94	90.867	ENSTSYG00000008027	DDB1	94	90.867	Carlito_syrichta
ENSPKIG00000019213	ddb1	92	91.160	ENSCAPG00000010786	DDB1	94	91.160	Cavia_aperea
ENSPKIG00000019213	ddb1	94	91.146	ENSCPOG00000009956	DDB1	94	91.146	Cavia_porcellus
ENSPKIG00000019213	ddb1	94	91.240	ENSCCAG00000035883	DDB1	94	91.240	Cebus_capucinus
ENSPKIG00000019213	ddb1	94	89.269	ENSCATG00000044495	DDB1	94	89.269	Cercocebus_atys
ENSPKIG00000019213	ddb1	94	91.240	ENSCLAG00000004126	DDB1	94	91.240	Chinchilla_lanigera
ENSPKIG00000019213	ddb1	94	91.240	ENSCSAG00000006392	DDB1	94	91.240	Chlorocebus_sabaeus
ENSPKIG00000019213	ddb1	84	84.016	ENSCHOG00000011377	DDB1	86	84.016	Choloepus_hoffmanni
ENSPKIG00000019213	ddb1	94	90.960	ENSCPBG00000017728	DDB1	94	90.960	Chrysemys_picta_bellii
ENSPKIG00000019213	ddb1	94	61.738	ENSCING00000007437	-	94	61.738	Ciona_intestinalis
ENSPKIG00000019213	ddb1	88	60.904	ENSCSAVG00000004783	-	100	60.761	Ciona_savignyi
ENSPKIG00000019213	ddb1	94	91.240	ENSCANG00000019948	DDB1	94	91.240	Colobus_angolensis_palliatus
ENSPKIG00000019213	ddb1	94	91.333	ENSCGRG00001016599	Ddb1	98	90.392	Cricetulus_griseus_chok1gshd
ENSPKIG00000019213	ddb1	94	91.333	ENSCGRG00000013427	Ddb1	94	91.333	Cricetulus_griseus_crigri
ENSPKIG00000019213	ddb1	93	96.136	ENSCSEG00000012499	ddb1	99	94.433	Cynoglossus_semilaevis
ENSPKIG00000019213	ddb1	94	95.442	ENSCVAG00000019531	ddb1	99	95.442	Cyprinodon_variegatus
ENSPKIG00000019213	ddb1	94	92.537	ENSDARG00000074431	ddb1	94	92.537	Danio_rerio
ENSPKIG00000019213	ddb1	94	91.527	ENSDNOG00000014884	DDB1	97	91.527	Dasypus_novemcinctus
ENSPKIG00000019213	ddb1	78	95.000	ENSDORG00000000127	Ddb1	93	95.000	Dipodomys_ordii
ENSPKIG00000019213	ddb1	94	61.368	FBgn0260962	pic	95	61.368	Drosophila_melanogaster
ENSPKIG00000019213	ddb1	64	94.882	ENSETEG00000001053	-	64	94.882	Echinops_telfairi
ENSPKIG00000019213	ddb1	78	84.139	ENSEBUG00000014593	ddb1	97	84.139	Eptatretus_burgeri
ENSPKIG00000019213	ddb1	94	91.240	ENSEASG00005008184	DDB1	94	91.240	Equus_asinus_asinus
ENSPKIG00000019213	ddb1	94	91.333	ENSECAG00000012136	DDB1	94	91.333	Equus_caballus
ENSPKIG00000019213	ddb1	85	87.037	ENSEEUG00000003194	DDB1	85	87.037	Erinaceus_europaeus
ENSPKIG00000019213	ddb1	94	96.082	ENSELUG00000023868	ddb1	94	96.082	Esox_lucius
ENSPKIG00000019213	ddb1	94	91.333	ENSFCAG00000029716	DDB1	94	91.333	Felis_catus
ENSPKIG00000019213	ddb1	95	89.807	ENSFALG00000011981	DDB1	95	89.807	Ficedula_albicollis
ENSPKIG00000019213	ddb1	94	91.333	ENSFDAG00000005128	DDB1	94	91.333	Fukomys_damarensis
ENSPKIG00000019213	ddb1	84	97.283	ENSFHEG00000022133	ddb1	93	97.283	Fundulus_heteroclitus
ENSPKIG00000019213	ddb1	79	98.328	ENSGMOG00000019386	ddb1	94	98.328	Gadus_morhua
ENSPKIG00000019213	ddb1	94	90.960	ENSGALG00000042333	DDB1	94	90.960	Gallus_gallus
ENSPKIG00000019213	ddb1	94	95.721	ENSGAFG00000013142	ddb1	99	95.721	Gambusia_affinis
ENSPKIG00000019213	ddb1	94	96.075	ENSGACG00000017182	ddb1	98	96.075	Gasterosteus_aculeatus
ENSPKIG00000019213	ddb1	89	90.757	ENSGAGG00000014124	DDB1	94	90.757	Gopherus_agassizii
ENSPKIG00000019213	ddb1	94	91.240	ENSGGOG00000004052	DDB1	94	91.240	Gorilla_gorilla
ENSPKIG00000019213	ddb1	94	95.993	ENSHBUG00000008873	ddb1	94	95.993	Haplochromis_burtoni
ENSPKIG00000019213	ddb1	94	91.053	ENSHGLG00000018430	DDB1	94	91.053	Heterocephalus_glaber_female
ENSPKIG00000019213	ddb1	94	90.028	ENSHGLG00100014475	DDB1	94	90.028	Heterocephalus_glaber_male
ENSPKIG00000019213	ddb1	95	94.936	ENSHCOG00000018670	ddb1	99	94.936	Hippocampus_comes
ENSPKIG00000019213	ddb1	94	95.450	ENSIPUG00000005612	DDB1	98	95.450	Ictalurus_punctatus
ENSPKIG00000019213	ddb1	94	91.240	ENSSTOG00000007552	DDB1	94	91.240	Ictidomys_tridecemlineatus
ENSPKIG00000019213	ddb1	94	91.240	ENSJJAG00000017769	Ddb1	94	91.240	Jaculus_jaculus
ENSPKIG00000019213	ddb1	94	95.628	ENSKMAG00000002315	ddb1	100	95.628	Kryptolebias_marmoratus
ENSPKIG00000019213	ddb1	84	96.254	ENSLBEG00000017065	ddb1	99	96.254	Labrus_bergylta
ENSPKIG00000019213	ddb1	94	91.256	ENSLACG00000017611	DDB1	97	91.271	Latimeria_chalumnae
ENSPKIG00000019213	ddb1	87	86.338	ENSLOCG00000000012	ddb1	95	86.338	Lepisosteus_oculatus
ENSPKIG00000019213	ddb1	94	91.146	ENSLAFG00000011513	DDB1	94	91.146	Loxodonta_africana
ENSPKIG00000019213	ddb1	94	91.240	ENSMFAG00000042035	DDB1	94	91.240	Macaca_fascicularis
ENSPKIG00000019213	ddb1	94	91.240	ENSMMUG00000002691	DDB1	100	90.789	Macaca_mulatta
ENSPKIG00000019213	ddb1	94	91.240	ENSMNEG00000031559	DDB1	94	91.240	Macaca_nemestrina
ENSPKIG00000019213	ddb1	94	91.240	ENSMLEG00000044136	DDB1	98	89.871	Mandrillus_leucophaeus
ENSPKIG00000019213	ddb1	94	96.645	ENSMAMG00000014372	ddb1	94	96.645	Mastacembelus_armatus
ENSPKIG00000019213	ddb1	94	95.899	ENSMZEG00005013835	ddb1	94	95.899	Maylandia_zebra
ENSPKIG00000019213	ddb1	89	89.314	ENSMGAG00000004990	DDB1	95	89.314	Meleagris_gallopavo
ENSPKIG00000019213	ddb1	94	91.333	ENSMAUG00000012926	Ddb1	94	91.333	Mesocricetus_auratus
ENSPKIG00000019213	ddb1	94	91.333	ENSMICG00000013703	DDB1	94	91.333	Microcebus_murinus
ENSPKIG00000019213	ddb1	94	91.146	ENSMOCG00000020499	Ddb1	94	91.146	Microtus_ochrogaster
ENSPKIG00000019213	ddb1	86	96.327	ENSMMOG00000001758	ddb1	99	96.327	Mola_mola
ENSPKIG00000019213	ddb1	94	83.395	ENSMODG00000020353	DDB1	93	83.395	Monodelphis_domestica
ENSPKIG00000019213	ddb1	94	96.735	ENSMALG00000014071	ddb1	94	96.735	Monopterus_albus
ENSPKIG00000019213	ddb1	94	91.333	MGP_CAROLIEiJ_G0022695	Ddb1	94	91.333	Mus_caroli
ENSPKIG00000019213	ddb1	94	91.426	ENSMUSG00000024740	Ddb1	94	91.426	Mus_musculus
ENSPKIG00000019213	ddb1	94	91.333	MGP_PahariEiJ_G0014189	Ddb1	94	91.333	Mus_pahari
ENSPKIG00000019213	ddb1	94	91.426	MGP_SPRETEiJ_G0023609	Ddb1	94	91.426	Mus_spretus
ENSPKIG00000019213	ddb1	94	88.164	ENSMPUG00000014200	DDB1	94	88.164	Mustela_putorius_furo
ENSPKIG00000019213	ddb1	94	91.333	ENSMLUG00000013232	DDB1	94	91.333	Myotis_lucifugus
ENSPKIG00000019213	ddb1	94	91.426	ENSNGAG00000009384	Ddb1	94	91.426	Nannospalax_galili
ENSPKIG00000019213	ddb1	94	96.086	ENSNBRG00000019581	ddb1	94	96.086	Neolamprologus_brichardi
ENSPKIG00000019213	ddb1	94	88.807	ENSNLEG00000002022	DDB1	94	88.807	Nomascus_leucogenys
ENSPKIG00000019213	ddb1	84	95.392	ENSMEUG00000001099	DDB1	87	95.392	Notamacropus_eugenii
ENSPKIG00000019213	ddb1	70	30.031	ENSMEUG00000004479	SF3B3	71	30.031	Notamacropus_eugenii
ENSPKIG00000019213	ddb1	84	82.054	ENSOPRG00000008254	DDB1	85	82.054	Ochotona_princeps
ENSPKIG00000019213	ddb1	94	91.240	ENSODEG00000002419	DDB1	94	91.240	Octodon_degus
ENSPKIG00000019213	ddb1	94	95.899	ENSONIG00000005804	ddb1	94	95.899	Oreochromis_niloticus
ENSPKIG00000019213	ddb1	84	90.881	ENSOANG00000004897	DDB1	94	90.881	Ornithorhynchus_anatinus
ENSPKIG00000019213	ddb1	94	91.333	ENSOCUG00000001667	DDB1	94	91.333	Oryctolagus_cuniculus
ENSPKIG00000019213	ddb1	94	95.810	ENSORLG00000001399	ddb1	99	94.607	Oryzias_latipes
ENSPKIG00000019213	ddb1	94	95.717	ENSORLG00020001277	ddb1	95	95.717	Oryzias_latipes_hni
ENSPKIG00000019213	ddb1	94	95.810	ENSORLG00015002080	ddb1	99	95.810	Oryzias_latipes_hsok
ENSPKIG00000019213	ddb1	94	95.556	ENSOMEG00000006181	ddb1	98	95.556	Oryzias_melastigma
ENSPKIG00000019213	ddb1	94	91.333	ENSOGAG00000016103	DDB1	94	91.333	Otolemur_garnettii
ENSPKIG00000019213	ddb1	94	91.240	ENSOARG00000011716	DDB1	93	91.240	Ovis_aries
ENSPKIG00000019213	ddb1	94	91.240	ENSPPAG00000035343	DDB1	94	91.240	Pan_paniscus
ENSPKIG00000019213	ddb1	94	91.333	ENSPPRG00000013300	DDB1	94	91.333	Panthera_pardus
ENSPKIG00000019213	ddb1	92	91.350	ENSPTIG00000006909	DDB1	92	91.350	Panthera_tigris_altaica
ENSPKIG00000019213	ddb1	94	91.240	ENSPTRG00000003737	DDB1	94	91.240	Pan_troglodytes
ENSPKIG00000019213	ddb1	94	91.240	ENSPANG00000000242	DDB1	94	91.240	Papio_anubis
ENSPKIG00000019213	ddb1	92	90.350	ENSPSIG00000013275	DDB1	94	90.350	Pelodiscus_sinensis
ENSPKIG00000019213	ddb1	86	96.122	ENSPMGG00000021179	ddb1	99	96.122	Periophthalmus_magnuspinnatus
ENSPKIG00000019213	ddb1	94	91.333	ENSPEMG00000012241	Ddb1	94	91.333	Peromyscus_maniculatus_bairdii
ENSPKIG00000019213	ddb1	89	87.132	ENSPMAG00000008479	ddb1	100	87.132	Petromyzon_marinus
ENSPKIG00000019213	ddb1	94	91.612	ENSPCIG00000002643	DDB1	94	91.612	Phascolarctos_cinereus
ENSPKIG00000019213	ddb1	94	95.798	ENSPFOG00000002768	ddb1	94	95.798	Poecilia_formosa
ENSPKIG00000019213	ddb1	94	95.810	ENSPLAG00000017227	ddb1	98	95.810	Poecilia_latipinna
ENSPKIG00000019213	ddb1	94	95.810	ENSPMEG00000011398	ddb1	98	95.810	Poecilia_mexicana
ENSPKIG00000019213	ddb1	96	94.166	ENSPREG00000004440	ddb1	99	94.166	Poecilia_reticulata
ENSPKIG00000019213	ddb1	93	87.652	ENSPPYG00000003193	DDB1	93	87.652	Pongo_abelii
ENSPKIG00000019213	ddb1	79	89.055	ENSPCAG00000011040	DDB1	79	89.055	Procavia_capensis
ENSPKIG00000019213	ddb1	94	90.884	ENSPCOG00000015176	DDB1	94	90.884	Propithecus_coquereli
ENSPKIG00000019213	ddb1	94	91.146	ENSPVAG00000003847	DDB1	94	91.146	Pteropus_vampyrus
ENSPKIG00000019213	ddb1	94	96.481	ENSPNAG00000006635	ddb1	99	95.708	Pygocentrus_nattereri
ENSPKIG00000019213	ddb1	94	91.426	ENSRNOG00000020715	Ddb1	94	91.426	Rattus_norvegicus
ENSPKIG00000019213	ddb1	94	91.240	ENSRBIG00000033611	DDB1	95	91.240	Rhinopithecus_bieti
ENSPKIG00000019213	ddb1	94	91.240	ENSRROG00000041407	DDB1	94	91.240	Rhinopithecus_roxellana
ENSPKIG00000019213	ddb1	94	91.333	ENSSBOG00000019775	DDB1	94	91.333	Saimiri_boliviensis_boliviensis
ENSPKIG00000019213	ddb1	88	88.933	ENSSHAG00000011600	DDB1	94	88.933	Sarcophilus_harrisii
ENSPKIG00000019213	ddb1	95	97.874	ENSSFOG00015011151	ddb1	97	97.874	Scleropages_formosus
ENSPKIG00000019213	ddb1	94	96.365	ENSSMAG00000009495	ddb1	94	96.365	Scophthalmus_maximus
ENSPKIG00000019213	ddb1	94	96.552	ENSSDUG00000004642	ddb1	94	96.552	Seriola_dumerili
ENSPKIG00000019213	ddb1	94	96.552	ENSSLDG00000015804	ddb1	94	96.552	Seriola_lalandi_dorsalis
ENSPKIG00000019213	ddb1	68	94.340	ENSSARG00000003290	-	71	94.340	Sorex_araneus
ENSPKIG00000019213	ddb1	94	91.240	ENSSPUG00000019338	DDB1	94	91.240	Sphenodon_punctatus
ENSPKIG00000019213	ddb1	94	96.648	ENSSPAG00000009888	ddb1	99	96.648	Stegastes_partitus
ENSPKIG00000019213	ddb1	94	90.926	ENSSSCG00000013094	DDB1	94	90.926	Sus_scrofa
ENSPKIG00000019213	ddb1	93	90.994	ENSTGUG00000006414	DDB1	94	90.994	Taeniopygia_guttata
ENSPKIG00000019213	ddb1	94	95.265	ENSTRUG00000016682	ddb1	99	95.265	Takifugu_rubripes
ENSPKIG00000019213	ddb1	82	89.519	ENSTNIG00000009565	ddb1	93	89.519	Tetraodon_nigroviridis
ENSPKIG00000019213	ddb1	86	85.122	ENSTTRG00000011055	DDB1	88	85.122	Tursiops_truncatus
ENSPKIG00000019213	ddb1	96	90.476	ENSUAMG00000017793	DDB1	95	90.476	Ursus_americanus
ENSPKIG00000019213	ddb1	96	90.476	ENSUMAG00000011788	DDB1	99	90.476	Ursus_maritimus
ENSPKIG00000019213	ddb1	84	86.566	ENSVPAG00000007963	DDB1	86	86.566	Vicugna_pacos
ENSPKIG00000019213	ddb1	94	91.333	ENSVVUG00000004987	DDB1	94	91.333	Vulpes_vulpes
ENSPKIG00000019213	ddb1	94	89.425	ENSXETG00000008820	ddb1	94	89.425	Xenopus_tropicalis
ENSPKIG00000019213	ddb1	86	95.408	ENSXCOG00000013956	ddb1	99	95.408	Xiphophorus_couchianus
ENSPKIG00000019213	ddb1	94	95.628	ENSXMAG00000000022	ddb1	99	95.628	Xiphophorus_maculatus