EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000019325 (Gene tree)
Gene ID: 111852294
Gene Symbol: ssb
Alias: -
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 7920 bases
Position: chrPGUA01000239.1:407617-415536
Accession: 111852294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000000821	RRM_1	PF00076.22	1.4e-08	1	1
ENSPKIP00000000801	RRM_1	PF00076.22	1.6e-08	1	1
ENSPKIP00000000821	RRM_3	PF08777.11	2.5e-30	1	1
ENSPKIP00000000801	RRM_3	PF08777.11	2.8e-30	1	1
ENSPKIP00000000821	La	PF05383.17	5.5e-21	1	1
ENSPKIP00000000801	La	PF05383.17	6.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000024721	-	1128	-	ENSPKIP00000000821	375 (aa)	-	-
ENSPKIT00000024701	-	4521	-	ENSPKIP00000000801	402 (aa)	XP_023683803	UPI000CD669BB

Gene Model

Click here to download ENSPKIG00000019325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000019325's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000019325	ssb	99	62.010	ENSG00000138385	SSB	100	68.333	Homo_sapiens
ENSPKIG00000019325	ssb	99	70.075	ENSAPOG00000003448	ssb	100	70.075	Acanthochromis_polyacanthus
ENSPKIG00000019325	ssb	99	60.859	ENSAMEG00000010507	SSB	98	60.386	Ailuropoda_melanoleuca
ENSPKIG00000019325	ssb	98	69.106	ENSACIG00000001738	ssb	96	70.000	Amphilophus_citrinellus
ENSPKIG00000019325	ssb	99	70.823	ENSAOCG00000020398	ssb	100	70.823	Amphiprion_ocellaris
ENSPKIG00000019325	ssb	99	71.072	ENSAPEG00000020395	ssb	100	71.072	Amphiprion_percula
ENSPKIG00000019325	ssb	99	71.144	ENSATEG00000016884	ssb	100	71.144	Anabas_testudineus
ENSPKIG00000019325	ssb	99	60.900	ENSAPLG00000006109	SSB	99	60.095	Anas_platyrhynchos
ENSPKIG00000019325	ssb	99	60.000	ENSACAG00000017008	SSB	99	60.000	Anolis_carolinensis
ENSPKIG00000019325	ssb	99	54.321	ENSANAG00000027195	-	98	54.613	Aotus_nancymaae
ENSPKIG00000019325	ssb	99	66.915	ENSACLG00000010798	ssb	100	66.667	Astatotilapia_calliptera
ENSPKIG00000019325	ssb	99	66.176	ENSAMXG00000012606	ssb	100	67.402	Astyanax_mexicanus
ENSPKIG00000019325	ssb	99	62.469	ENSBTAG00000008716	SSB	98	61.845	Bos_taurus
ENSPKIG00000019325	ssb	79	34.868	WBGene00016653	C44E4.4	76	35.855	Caenorhabditis_elegans
ENSPKIG00000019325	ssb	99	62.222	ENSCJAG00000045073	SSB	98	61.596	Callithrix_jacchus
ENSPKIG00000019325	ssb	99	63.054	ENSCAFG00000012418	SSB	98	62.438	Canis_familiaris
ENSPKIG00000019325	ssb	99	63.054	ENSCAFG00020002900	SSB	98	62.438	Canis_lupus_dingo
ENSPKIG00000019325	ssb	99	58.313	ENSCHIG00000022196	-	98	58.647	Capra_hircus
ENSPKIG00000019325	ssb	99	62.716	ENSCHIG00000022624	-	99	61.975	Capra_hircus
ENSPKIG00000019325	ssb	99	62.624	ENSTSYG00000000097	SSB	98	62.000	Carlito_syrichta
ENSPKIG00000019325	ssb	99	63.457	ENSCPOG00000003338	SSB	98	62.594	Cavia_porcellus
ENSPKIG00000019325	ssb	99	62.469	ENSCCAG00000035147	SSB	98	61.845	Cebus_capucinus
ENSPKIG00000019325	ssb	72	58.621	ENSCATG00000036701	SSB	83	57.586	Cercocebus_atys
ENSPKIG00000019325	ssb	99	47.015	ENSCATG00000042909	-	98	46.402	Cercocebus_atys
ENSPKIG00000019325	ssb	99	62.716	ENSCLAG00000015617	-	98	62.344	Chinchilla_lanigera
ENSPKIG00000019325	ssb	98	56.642	ENSCSAG00000018390	-	99	55.696	Chlorocebus_sabaeus
ENSPKIG00000019325	ssb	99	62.716	ENSCSAG00000015200	SSB	88	61.975	Chlorocebus_sabaeus
ENSPKIG00000019325	ssb	99	62.963	ENSCHOG00000007763	SSB	98	62.095	Choloepus_hoffmanni
ENSPKIG00000019325	ssb	99	65.770	ENSCPBG00000006519	SSB	99	65.770	Chrysemys_picta_bellii
ENSPKIG00000019325	ssb	100	55.419	ENSCANG00000033240	-	99	54.726	Colobus_angolensis_palliatus
ENSPKIG00000019325	ssb	98	48.118	ENSCANG00000028838	-	91	47.792	Colobus_angolensis_palliatus
ENSPKIG00000019325	ssb	99	62.716	ENSCANG00000027695	SSB	98	62.095	Colobus_angolensis_palliatus
ENSPKIG00000019325	ssb	100	57.702	ENSCGRG00001024831	Ssb	99	56.790	Cricetulus_griseus_chok1gshd
ENSPKIG00000019325	ssb	100	57.702	ENSCGRG00000005387	Ssb	99	56.790	Cricetulus_griseus_crigri
ENSPKIG00000019325	ssb	99	68.828	ENSCSEG00000011599	ssb	100	68.828	Cynoglossus_semilaevis
ENSPKIG00000019325	ssb	99	69.231	ENSCVAG00000021558	ssb	100	69.231	Cyprinodon_variegatus
ENSPKIG00000019325	ssb	99	68.734	ENSDARG00000029252	ssb	100	68.734	Danio_rerio
ENSPKIG00000019325	ssb	99	62.222	ENSDNOG00000013450	SSB	98	61.347	Dasypus_novemcinctus
ENSPKIG00000019325	ssb	99	58.466	ENSDORG00000005543	Ssb	98	57.921	Dipodomys_ordii
ENSPKIG00000019325	ssb	90	32.958	FBgn0011638	La	79	33.438	Drosophila_melanogaster
ENSPKIG00000019325	ssb	99	46.900	ENSEBUG00000001237	ssb	97	45.707	Eptatretus_burgeri
ENSPKIG00000019325	ssb	100	63.636	ENSEASG00005022835	SSB	99	62.779	Equus_asinus_asinus
ENSPKIG00000019325	ssb	99	63.704	ENSECAG00000018495	SSB	98	62.843	Equus_caballus
ENSPKIG00000019325	ssb	80	51.645	ENSEEUG00000008077	SSB	77	50.825	Erinaceus_europaeus
ENSPKIG00000019325	ssb	99	71.393	ENSELUG00000020929	ssb	100	74.378	Esox_lucius
ENSPKIG00000019325	ssb	99	63.547	ENSFCAG00000011601	SSB	98	62.687	Felis_catus
ENSPKIG00000019325	ssb	100	64.548	ENSFALG00000000930	SSB	99	64.303	Ficedula_albicollis
ENSPKIG00000019325	ssb	99	63.704	ENSFDAG00000000598	SSB	99	62.963	Fukomys_damarensis
ENSPKIG00000019325	ssb	78	64.262	ENSFHEG00000003268	ssb	94	66.124	Fundulus_heteroclitus
ENSPKIG00000019325	ssb	98	65.835	ENSGMOG00000002664	ssb	99	64.750	Gadus_morhua
ENSPKIG00000019325	ssb	99	64.865	ENSGALG00000009677	SSB	99	63.145	Gallus_gallus
ENSPKIG00000019325	ssb	99	68.719	ENSGAFG00000002749	ssb	100	68.966	Gambusia_affinis
ENSPKIG00000019325	ssb	99	66.176	ENSGACG00000005107	ssb	100	65.196	Gasterosteus_aculeatus
ENSPKIG00000019325	ssb	99	66.259	ENSGAGG00000007807	SSB	99	66.259	Gopherus_agassizii
ENSPKIG00000019325	ssb	99	53.333	ENSGGOG00000024891	-	99	52.346	Gorilla_gorilla
ENSPKIG00000019325	ssb	54	58.929	ENSGGOG00000023471	-	91	58.036	Gorilla_gorilla
ENSPKIG00000019325	ssb	99	67.164	ENSHBUG00000006584	ssb	100	66.915	Haplochromis_burtoni
ENSPKIG00000019325	ssb	99	62.774	ENSHGLG00000017580	-	98	61.576	Heterocephalus_glaber_female
ENSPKIG00000019325	ssb	99	58.168	ENSHGLG00000004478	-	98	57.778	Heterocephalus_glaber_female
ENSPKIG00000019325	ssb	99	56.683	ENSHGLG00000005832	-	98	55.750	Heterocephalus_glaber_female
ENSPKIG00000019325	ssb	99	56.235	ENSHGLG00100008767	-	98	55.309	Heterocephalus_glaber_male
ENSPKIG00000019325	ssb	99	62.774	ENSHGLG00100003084	-	98	61.576	Heterocephalus_glaber_male
ENSPKIG00000019325	ssb	99	64.160	ENSHCOG00000019011	ssb	99	64.322	Hippocampus_comes
ENSPKIG00000019325	ssb	99	69.193	ENSIPUG00000003681	SSB	100	69.193	Ictalurus_punctatus
ENSPKIG00000019325	ssb	99	62.315	ENSSTOG00000008416	SSB	98	61.845	Ictidomys_tridecemlineatus
ENSPKIG00000019325	ssb	100	55.556	ENSJJAG00000023158	-	99	55.213	Jaculus_jaculus
ENSPKIG00000019325	ssb	90	50.552	ENSJJAG00000016250	-	94	49.307	Jaculus_jaculus
ENSPKIG00000019325	ssb	99	69.900	ENSKMAG00000017317	ssb	100	69.900	Kryptolebias_marmoratus
ENSPKIG00000019325	ssb	99	69.576	ENSLBEG00000017345	ssb	100	69.576	Labrus_bergylta
ENSPKIG00000019325	ssb	99	61.520	ENSLACG00000014056	SSB	99	61.275	Latimeria_chalumnae
ENSPKIG00000019325	ssb	99	76.179	ENSLOCG00000007933	ssb	99	75.682	Lepisosteus_oculatus
ENSPKIG00000019325	ssb	99	53.465	ENSLAFG00000028909	-	99	52.970	Loxodonta_africana
ENSPKIG00000019325	ssb	79	46.780	ENSLAFG00000026721	-	98	47.138	Loxodonta_africana
ENSPKIG00000019325	ssb	99	59.762	ENSLAFG00000000867	-	99	59.286	Loxodonta_africana
ENSPKIG00000019325	ssb	99	62.716	ENSMFAG00000039066	SSB	98	62.095	Macaca_fascicularis
ENSPKIG00000019325	ssb	94	55.028	ENSMFAG00000041478	-	90	57.099	Macaca_fascicularis
ENSPKIG00000019325	ssb	99	46.250	ENSMMUG00000039889	-	98	45.885	Macaca_mulatta
ENSPKIG00000019325	ssb	99	62.716	ENSMMUG00000023051	SSB	98	62.095	Macaca_mulatta
ENSPKIG00000019325	ssb	100	53.808	ENSMMUG00000011724	-	96	53.234	Macaca_mulatta
ENSPKIG00000019325	ssb	94	55.028	ENSMNEG00000034698	-	90	57.099	Macaca_nemestrina
ENSPKIG00000019325	ssb	99	52.812	ENSMNEG00000028321	SSB	82	72.973	Macaca_nemestrina
ENSPKIG00000019325	ssb	99	62.716	ENSMLEG00000035717	SSB	88	73.043	Mandrillus_leucophaeus
ENSPKIG00000019325	ssb	100	43.103	ENSMLEG00000042644	-	98	42.040	Mandrillus_leucophaeus
ENSPKIG00000019325	ssb	99	70.398	ENSMAMG00000004800	ssb	100	70.398	Mastacembelus_armatus
ENSPKIG00000019325	ssb	99	66.915	ENSMZEG00005005749	ssb	100	66.667	Maylandia_zebra
ENSPKIG00000019325	ssb	99	64.128	ENSMGAG00000010328	SSB	100	67.633	Meleagris_gallopavo
ENSPKIG00000019325	ssb	98	58.333	ENSMICG00000033304	-	94	60.215	Microcebus_murinus
ENSPKIG00000019325	ssb	99	63.210	ENSMICG00000028252	-	98	62.344	Microcebus_murinus
ENSPKIG00000019325	ssb	98	52.033	ENSMODG00000019271	-	99	50.495	Monodelphis_domestica
ENSPKIG00000019325	ssb	99	59.466	ENSMODG00000008227	-	99	59.223	Monodelphis_domestica
ENSPKIG00000019325	ssb	97	50.681	ENSMODG00000007027	-	99	60.479	Monodelphis_domestica
ENSPKIG00000019325	ssb	96	68.681	ENSMALG00000008045	ssb	90	69.892	Monopterus_albus
ENSPKIG00000019325	ssb	99	56.802	MGP_CAROLIEiJ_G0023629	-	96	67.105	Mus_caroli
ENSPKIG00000019325	ssb	99	56.325	ENSMUSG00000068882	Ssb	96	67.105	Mus_musculus
ENSPKIG00000019325	ssb	99	56.295	MGP_PahariEiJ_G0025081	-	96	67.105	Mus_pahari
ENSPKIG00000019325	ssb	99	56.325	MGP_SPRETEiJ_G0024551	Ssb	96	67.105	Mus_spretus
ENSPKIG00000019325	ssb	99	64.198	ENSMPUG00000000785	SSB	98	63.342	Mustela_putorius_furo
ENSPKIG00000019325	ssb	99	61.151	ENSMLUG00000016316	SSB	99	60.817	Myotis_lucifugus
ENSPKIG00000019325	ssb	99	66.418	ENSNBRG00000012661	ssb	100	66.089	Neolamprologus_brichardi
ENSPKIG00000019325	ssb	99	62.469	ENSNLEG00000004958	SSB	98	61.845	Nomascus_leucogenys
ENSPKIG00000019325	ssb	89	50.742	ENSNLEG00000028754	-	77	51.077	Nomascus_leucogenys
ENSPKIG00000019325	ssb	66	64.683	ENSMEUG00000001650	-	100	68.273	Notamacropus_eugenii
ENSPKIG00000019325	ssb	51	61.538	ENSOPRG00000008475	-	72	61.538	Ochotona_princeps
ENSPKIG00000019325	ssb	93	62.069	ENSODEG00000004202	-	99	61.702	Octodon_degus
ENSPKIG00000019325	ssb	99	67.662	ENSONIG00000008776	ssb	100	67.164	Oreochromis_niloticus
ENSPKIG00000019325	ssb	100	60.934	ENSOANG00000008543	SSB	99	61.179	Ornithorhynchus_anatinus
ENSPKIG00000019325	ssb	99	62.469	ENSOCUG00000010396	SSB	99	61.975	Oryctolagus_cuniculus
ENSPKIG00000019325	ssb	99	66.418	ENSORLG00000017208	ssb	100	66.418	Oryzias_latipes
ENSPKIG00000019325	ssb	99	66.584	ENSORLG00020022574	ssb	100	66.832	Oryzias_latipes_hni
ENSPKIG00000019325	ssb	99	66.667	ENSORLG00015016592	ssb	100	66.667	Oryzias_latipes_hsok
ENSPKIG00000019325	ssb	99	66.998	ENSOMEG00000003193	ssb	100	67.246	Oryzias_melastigma
ENSPKIG00000019325	ssb	99	59.382	ENSOGAG00000029768	SSB	98	58.654	Otolemur_garnettii
ENSPKIG00000019325	ssb	99	62.963	ENSOARG00000002906	SSB	99	62.222	Ovis_aries
ENSPKIG00000019325	ssb	99	62.010	ENSPPAG00000042673	SSB	98	61.386	Pan_paniscus
ENSPKIG00000019325	ssb	92	50.000	ENSPPAG00000006189	-	95	48.656	Pan_paniscus
ENSPKIG00000019325	ssb	99	53.333	ENSPPAG00000032427	-	100	62.016	Pan_paniscus
ENSPKIG00000019325	ssb	99	63.547	ENSPPRG00000006599	SSB	98	62.687	Panthera_pardus
ENSPKIG00000019325	ssb	99	63.547	ENSPTIG00000011021	SSB	96	62.687	Panthera_tigris_altaica
ENSPKIG00000019325	ssb	99	62.010	ENSPTRG00000012620	SSB	98	61.386	Pan_troglodytes
ENSPKIG00000019325	ssb	99	50.370	ENSPTRG00000042880	-	99	50.370	Pan_troglodytes
ENSPKIG00000019325	ssb	99	62.716	ENSPANG00000007440	SSB	98	62.095	Papio_anubis
ENSPKIG00000019325	ssb	99	46.402	ENSPANG00000034126	-	98	45.658	Papio_anubis
ENSPKIG00000019325	ssb	98	42.473	ENSPANG00000031877	-	90	41.514	Papio_anubis
ENSPKIG00000019325	ssb	99	65.037	ENSPSIG00000002265	SSB	93	65.037	Pelodiscus_sinensis
ENSPKIG00000019325	ssb	92	57.790	ENSPMGG00000020075	ssb	91	61.538	Periophthalmus_magnuspinnatus
ENSPKIG00000019325	ssb	97	46.667	ENSPMAG00000002982	ssb	99	46.226	Petromyzon_marinus
ENSPKIG00000019325	ssb	99	61.728	ENSPCIG00000028591	-	99	62.222	Phascolarctos_cinereus
ENSPKIG00000019325	ssb	99	68.905	ENSPFOG00000009650	ssb	100	68.905	Poecilia_formosa
ENSPKIG00000019325	ssb	99	68.905	ENSPLAG00000020498	ssb	100	68.905	Poecilia_latipinna
ENSPKIG00000019325	ssb	99	68.905	ENSPMEG00000001051	ssb	100	68.905	Poecilia_mexicana
ENSPKIG00000019325	ssb	98	68.097	ENSPREG00000003708	ssb	99	69.393	Poecilia_reticulata
ENSPKIG00000019325	ssb	99	62.469	ENSPPYG00000012919	SSB	98	61.845	Pongo_abelii
ENSPKIG00000019325	ssb	95	60.836	ENSPCAG00000010276	SSB	99	60.574	Procavia_capensis
ENSPKIG00000019325	ssb	99	60.741	ENSPCOG00000015741	-	92	69.828	Propithecus_coquereli
ENSPKIG00000019325	ssb	99	56.049	ENSPCOG00000023189	-	98	55.112	Propithecus_coquereli
ENSPKIG00000019325	ssb	93	62.535	ENSPVAG00000006615	SSB	99	64.205	Pteropus_vampyrus
ENSPKIG00000019325	ssb	99	66.667	ENSPNYG00000006444	ssb	100	66.418	Pundamilia_nyererei
ENSPKIG00000019325	ssb	99	70.833	ENSPNAG00000011708	ssb	100	71.324	Pygocentrus_nattereri
ENSPKIG00000019325	ssb	99	56.683	ENSRNOG00000011606	AABR07061825.1	99	55.335	Rattus_norvegicus
ENSPKIG00000019325	ssb	100	56.295	ENSRNOG00000007998	Ssb	99	54.087	Rattus_norvegicus
ENSPKIG00000019325	ssb	99	46.135	ENSRBIG00000029918	-	98	45.025	Rhinopithecus_bieti
ENSPKIG00000019325	ssb	99	54.523	ENSRBIG00000041972	SSB	85	72.973	Rhinopithecus_bieti
ENSPKIG00000019325	ssb	89	56.354	ENSRBIG00000041608	-	97	55.249	Rhinopithecus_bieti
ENSPKIG00000019325	ssb	94	53.158	ENSRBIG00000041232	-	98	52.368	Rhinopithecus_bieti
ENSPKIG00000019325	ssb	99	51.372	ENSRROG00000007149	-	98	50.000	Rhinopithecus_roxellana
ENSPKIG00000019325	ssb	89	59.392	ENSRROG00000034102	-	94	56.364	Rhinopithecus_roxellana
ENSPKIG00000019325	ssb	99	53.652	ENSRROG00000031684	-	99	52.897	Rhinopithecus_roxellana
ENSPKIG00000019325	ssb	99	62.716	ENSRROG00000040346	SSB	98	62.095	Rhinopithecus_roxellana
ENSPKIG00000019325	ssb	99	62.716	ENSSBOG00000027204	SSB	98	62.095	Saimiri_boliviensis_boliviensis
ENSPKIG00000019325	ssb	99	61.481	ENSSHAG00000018062	SSB	99	61.975	Sarcophilus_harrisii
ENSPKIG00000019325	ssb	100	84.483	ENSSFOG00015000550	ssb	100	83.990	Scleropages_formosus
ENSPKIG00000019325	ssb	98	70.053	ENSSMAG00000013885	ssb	99	71.968	Scophthalmus_maximus
ENSPKIG00000019325	ssb	99	72.886	ENSSDUG00000020117	ssb	100	72.886	Seriola_dumerili
ENSPKIG00000019325	ssb	99	67.581	ENSSLDG00000002525	ssb	100	69.825	Seriola_lalandi_dorsalis
ENSPKIG00000019325	ssb	95	56.136	ENSSARG00000007747	SSB	99	55.352	Sorex_araneus
ENSPKIG00000019325	ssb	99	65.602	ENSSPUG00000012112	SSB	99	65.356	Sphenodon_punctatus
ENSPKIG00000019325	ssb	99	69.077	ENSSPAG00000005696	ssb	100	69.077	Stegastes_partitus
ENSPKIG00000019325	ssb	97	60.218	ENSSSCG00000015938	SSB	95	60.260	Sus_scrofa
ENSPKIG00000019325	ssb	100	63.504	ENSTGUG00000007942	SSB	99	63.260	Taeniopygia_guttata
ENSPKIG00000019325	ssb	99	67.164	ENSTRUG00000017839	ssb	100	67.164	Takifugu_rubripes
ENSPKIG00000019325	ssb	97	64.785	ENSTNIG00000000915	ssb	91	70.988	Tetraodon_nigroviridis
ENSPKIG00000019325	ssb	82	73.043	ENSTBEG00000009056	SSB	82	73.043	Tupaia_belangeri
ENSPKIG00000019325	ssb	99	63.054	ENSTTRG00000002152	SSB	98	62.438	Tursiops_truncatus
ENSPKIG00000019325	ssb	98	62.069	ENSUAMG00000027833	SSB	98	63.130	Ursus_americanus
ENSPKIG00000019325	ssb	99	63.054	ENSUMAG00000013907	SSB	98	62.189	Ursus_maritimus
ENSPKIG00000019325	ssb	99	63.119	ENSVPAG00000007183	SSB	98	62.250	Vicugna_pacos
ENSPKIG00000019325	ssb	99	63.300	ENSVVUG00000016573	SSB	76	62.189	Vulpes_vulpes
ENSPKIG00000019325	ssb	98	57.754	ENSXETG00000025402	ssb	100	55.711	Xenopus_tropicalis
ENSPKIG00000019325	ssb	98	66.846	ENSXCOG00000019109	ssb	97	66.577	Xiphophorus_couchianus
ENSPKIG00000019325	ssb	99	67.734	ENSXMAG00000004888	ssb	100	67.734	Xiphophorus_maculatus