EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000019329 (Gene tree)
Gene ID: 111838624
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC)-binding protein 3
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 14865 bases
Position: chrPGUA01000067.1:456941-471805
Accession: 111838624
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000000815	KH_1	PF00013.29	2.4e-55	1	3
ENSPKIP00000000815	KH_1	PF00013.29	2.4e-55	2	3
ENSPKIP00000000815	KH_1	PF00013.29	2.4e-55	3	3
ENSPKIP00000000843	KH_1	PF00013.29	1.2e-48	1	3
ENSPKIP00000000843	KH_1	PF00013.29	1.2e-48	2	3
ENSPKIP00000000843	KH_1	PF00013.29	1.2e-48	3	3
ENSPKIP00000000815	KH_2	PF07650.17	3.9e-14	1	1
ENSPKIP00000000843	KH_2	PF07650.17	9.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000024716	-	5106	-	ENSPKIP00000000815	326 (aa)	XP_023657596	UPI000CD6652E
ENSPKIT00000024744	-	948	-	ENSPKIP00000000843	315 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000019329's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000019329's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000019329	pcbp3	78	86.413	ENSPKIG00000020913	-	82	86.413
ENSPKIG00000019329	pcbp3	65	36.765	ENSPKIG00000005077	KHSRP	57	36.765
ENSPKIG00000019329	pcbp3	90	37.500	ENSPKIG00000009065	-	59	32.680
ENSPKIG00000019329	pcbp3	97	58.333	ENSPKIG00000005487	-	73	60.661
ENSPKIG00000019329	pcbp3	68	40.625	ENSPKIG00000003200	khsrp	57	40.625
ENSPKIG00000019329	pcbp3	97	77.564	ENSPKIG00000006570	PCBP2	96	79.739
ENSPKIG00000019329	pcbp3	74	52.055	ENSPKIG00000010245	hnrpkl	56	52.055
ENSPKIG00000019329	pcbp3	97	63.450	ENSPKIG00000010244	pcbp4	75	63.450
ENSPKIG00000019329	pcbp3	89	39.683	ENSPKIG00000004367	fubp3	65	39.062
ENSPKIG00000019329	pcbp3	88	41.270	ENSPKIG00000007267	-	75	41.270
ENSPKIG00000019329	pcbp3	89	40.845	ENSPKIG00000001428	NOVA1	51	40.845
ENSPKIG00000019329	pcbp3	90	36.090	ENSPKIG00000009855	igf2bp2b	59	36.090
ENSPKIG00000019329	pcbp3	92	32.278	ENSPKIG00000012340	igf2bp3	66	32.278
ENSPKIG00000019329	pcbp3	97	78.275	ENSPKIG00000002205	PCBP2	98	75.084
ENSPKIG00000019329	pcbp3	92	32.117	ENSPKIG00000023239	igf2bp1	57	32.117
ENSPKIG00000019329	pcbp3	81	52.857	ENSPKIG00000021705	hnrnpk	64	45.679

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000019329	pcbp3	99	94.231	ENSAPOG00000020003	pcbp3	89	94.231	Acanthochromis_polyacanthus
ENSPKIG00000019329	pcbp3	100	98.165	ENSAPOG00000016582	-	100	98.165	Acanthochromis_polyacanthus
ENSPKIG00000019329	pcbp3	98	90.090	ENSAMEG00000001697	-	99	85.920	Ailuropoda_melanoleuca
ENSPKIG00000019329	pcbp3	100	87.429	ENSACIG00000010933	pcbp3	100	87.429	Amphilophus_citrinellus
ENSPKIG00000019329	pcbp3	100	94.462	ENSACIG00000002739	-	100	94.462	Amphilophus_citrinellus
ENSPKIG00000019329	pcbp3	90	94.681	ENSAOCG00000007806	-	100	94.198	Amphiprion_ocellaris
ENSPKIG00000019329	pcbp3	97	94.953	ENSAOCG00000008592	-	100	94.953	Amphiprion_ocellaris
ENSPKIG00000019329	pcbp3	100	89.773	ENSAPEG00000008011	pcbp3	100	89.773	Amphiprion_percula
ENSPKIG00000019329	pcbp3	100	96.552	ENSAPEG00000005209	-	100	96.552	Amphiprion_percula
ENSPKIG00000019329	pcbp3	97	89.297	ENSATEG00000015787	-	100	89.297	Anabas_testudineus
ENSPKIG00000019329	pcbp3	100	97.468	ENSATEG00000009833	-	100	97.468	Anabas_testudineus
ENSPKIG00000019329	pcbp3	98	75.749	ENSAPLG00000008951	-	82	75.749	Anas_platyrhynchos
ENSPKIG00000019329	pcbp3	98	91.463	ENSAPLG00000002975	-	98	91.463	Anas_platyrhynchos
ENSPKIG00000019329	pcbp3	98	82.196	ENSACAG00000009819	-	98	82.196	Anolis_carolinensis
ENSPKIG00000019329	pcbp3	98	84.314	ENSACAG00000004607	-	99	84.314	Anolis_carolinensis
ENSPKIG00000019329	pcbp3	90	96.930	ENSANAG00000030702	-	100	97.059	Aotus_nancymaae
ENSPKIG00000019329	pcbp3	100	97.554	ENSACLG00000003801	-	100	97.554	Astatotilapia_calliptera
ENSPKIG00000019329	pcbp3	100	88.920	ENSACLG00000011835	pcbp3	100	88.920	Astatotilapia_calliptera
ENSPKIG00000019329	pcbp3	95	69.753	ENSAMXG00000001760	zgc:110045	76	65.896	Astyanax_mexicanus
ENSPKIG00000019329	pcbp3	97	94.408	ENSAMXG00000013588	-	100	94.408	Astyanax_mexicanus
ENSPKIG00000019329	pcbp3	100	91.429	ENSAMXG00000003440	pcbp3	100	91.429	Astyanax_mexicanus
ENSPKIG00000019329	pcbp3	89	97.817	ENSCAFG00020019472	-	81	97.817	Canis_lupus_dingo
ENSPKIG00000019329	pcbp3	98	95.860	ENSCSAG00000007440	-	89	95.860	Chlorocebus_sabaeus
ENSPKIG00000019329	pcbp3	95	96.382	ENSCPBG00000012151	-	99	90.120	Chrysemys_picta_bellii
ENSPKIG00000019329	pcbp3	98	81.525	ENSCPBG00000000733	-	76	81.159	Chrysemys_picta_bellii
ENSPKIG00000019329	pcbp3	97	94.408	ENSCSEG00000000822	pcbp3	99	94.408	Cynoglossus_semilaevis
ENSPKIG00000019329	pcbp3	100	78.886	ENSCSEG00000016984	-	100	78.886	Cynoglossus_semilaevis
ENSPKIG00000019329	pcbp3	100	97.248	ENSCVAG00000005262	-	100	97.248	Cyprinodon_variegatus
ENSPKIG00000019329	pcbp3	100	90.028	ENSCVAG00000014482	pcbp3	100	90.028	Cyprinodon_variegatus
ENSPKIG00000019329	pcbp3	100	91.714	ENSDARG00000054378	pcbp3	100	91.714	Danio_rerio
ENSPKIG00000019329	pcbp3	98	83.439	ENSETEG00000015988	-	98	83.439	Echinops_telfairi
ENSPKIG00000019329	pcbp3	90	71.138	ENSEBUG00000005495	pcbp3	74	71.138	Eptatretus_burgeri
ENSPKIG00000019329	pcbp3	97	78.864	ENSEBUG00000007485	-	92	82.192	Eptatretus_burgeri
ENSPKIG00000019329	pcbp3	90	74.627	ENSEBUG00000016192	pcbp3	99	74.627	Eptatretus_burgeri
ENSPKIG00000019329	pcbp3	100	89.802	ENSELUG00000003521	pcbp3	100	89.802	Esox_lucius
ENSPKIG00000019329	pcbp3	100	97.554	ENSELUG00000001560	-	91	97.554	Esox_lucius
ENSPKIG00000019329	pcbp3	98	94.904	ENSFALG00000003949	-	95	98.020	Ficedula_albicollis
ENSPKIG00000019329	pcbp3	98	76.022	ENSFALG00000004411	-	77	76.022	Ficedula_albicollis
ENSPKIG00000019329	pcbp3	100	95.925	ENSFHEG00000006539	-	100	95.925	Fundulus_heteroclitus
ENSPKIG00000019329	pcbp3	97	95.440	ENSFHEG00000016615	pcbp3	96	95.440	Fundulus_heteroclitus
ENSPKIG00000019329	pcbp3	96	70.149	ENSGMOG00000008611	-	100	70.695	Gadus_morhua
ENSPKIG00000019329	pcbp3	97	78.507	ENSGMOG00000011992	pcbp3	96	81.325	Gadus_morhua
ENSPKIG00000019329	pcbp3	95	83.489	ENSGALG00000013155	-	98	83.489	Gallus_gallus
ENSPKIG00000019329	pcbp3	98	83.944	ENSGALG00000004394	-	98	90.761	Gallus_gallus
ENSPKIG00000019329	pcbp3	100	84.751	ENSGAFG00000011430	pcbp3	99	84.751	Gambusia_affinis
ENSPKIG00000019329	pcbp3	100	97.554	ENSGAFG00000010274	-	100	97.554	Gambusia_affinis
ENSPKIG00000019329	pcbp3	100	77.747	ENSGACG00000014955	-	97	81.250	Gasterosteus_aculeatus
ENSPKIG00000019329	pcbp3	100	88.889	ENSGACG00000002266	-	100	88.889	Gasterosteus_aculeatus
ENSPKIG00000019329	pcbp3	89	90.602	ENSGAGG00000000271	-	100	90.602	Gopherus_agassizii
ENSPKIG00000019329	pcbp3	77	91.848	ENSGAGG00000006956	-	76	91.848	Gopherus_agassizii
ENSPKIG00000019329	pcbp3	100	97.554	ENSHBUG00000021782	-	100	97.554	Haplochromis_burtoni
ENSPKIG00000019329	pcbp3	98	93.038	ENSHBUG00000010697	pcbp3	98	94.175	Haplochromis_burtoni
ENSPKIG00000019329	pcbp3	100	90.031	ENSHCOG00000006067	-	100	90.031	Hippocampus_comes
ENSPKIG00000019329	pcbp3	100	90.286	ENSHCOG00000017868	pcbp3	100	90.286	Hippocampus_comes
ENSPKIG00000019329	pcbp3	100	97.143	ENSIPUG00000006238	pcbp3	100	97.143	Ictalurus_punctatus
ENSPKIG00000019329	pcbp3	100	97.248	ENSKMAG00000018530	-	100	97.248	Kryptolebias_marmoratus
ENSPKIG00000019329	pcbp3	100	89.773	ENSKMAG00000003046	pcbp3	100	89.773	Kryptolebias_marmoratus
ENSPKIG00000019329	pcbp3	99	94.569	ENSLBEG00000006201	pcbp3	98	94.569	Labrus_bergylta
ENSPKIG00000019329	pcbp3	100	82.663	ENSLBEG00000006542	-	100	82.663	Labrus_bergylta
ENSPKIG00000019329	pcbp3	98	75.824	ENSLACG00000010804	zgc:110045	77	75.543	Latimeria_chalumnae
ENSPKIG00000019329	pcbp3	97	81.543	ENSLACG00000010386	pcbp3	77	81.543	Latimeria_chalumnae
ENSPKIG00000019329	pcbp3	93	84.356	ENSLOCG00000005058	zgc:110045	80	84.356	Lepisosteus_oculatus
ENSPKIG00000019329	pcbp3	98	90.419	ENSLOCG00000009369	pcbp3	99	90.419	Lepisosteus_oculatus
ENSPKIG00000019329	pcbp3	97	95.114	ENSMAMG00000022336	pcbp3	94	95.114	Mastacembelus_armatus
ENSPKIG00000019329	pcbp3	100	96.203	ENSMAMG00000011620	-	100	96.203	Mastacembelus_armatus
ENSPKIG00000019329	pcbp3	100	87.143	ENSMZEG00005008993	pcbp3	100	87.143	Maylandia_zebra
ENSPKIG00000019329	pcbp3	100	88.462	ENSMZEG00005014882	-	100	88.462	Maylandia_zebra
ENSPKIG00000019329	pcbp3	98	76.022	ENSMGAG00000006794	-	77	76.022	Meleagris_gallopavo
ENSPKIG00000019329	pcbp3	93	81.556	ENSMGAG00000001883	-	96	81.844	Meleagris_gallopavo
ENSPKIG00000019329	pcbp3	97	91.667	ENSMMOG00000000730	pcbp3	88	93.569	Mola_mola
ENSPKIG00000019329	pcbp3	100	96.508	ENSMMOG00000005216	-	100	96.508	Mola_mola
ENSPKIG00000019329	pcbp3	72	78.505	ENSMODG00000027884	-	93	78.505	Monodelphis_domestica
ENSPKIG00000019329	pcbp3	100	87.464	ENSMALG00000000691	pcbp3	100	87.464	Monopterus_albus
ENSPKIG00000019329	pcbp3	98	86.930	ENSMPUG00000001779	-	90	86.930	Mustela_putorius_furo
ENSPKIG00000019329	pcbp3	100	88.462	ENSNBRG00000016714	-	100	88.462	Neolamprologus_brichardi
ENSPKIG00000019329	pcbp3	100	87.679	ENSNBRG00000016409	-	100	87.679	Neolamprologus_brichardi
ENSPKIG00000019329	pcbp3	94	84.412	ENSOPRG00000003431	-	99	84.412	Ochotona_princeps
ENSPKIG00000019329	pcbp3	100	95.639	ENSONIG00000004611	-	100	95.639	Oreochromis_niloticus
ENSPKIG00000019329	pcbp3	98	82.402	ENSONIG00000012122	-	98	84.943	Oreochromis_niloticus
ENSPKIG00000019329	pcbp3	98	94.904	ENSOCUG00000002696	-	87	97.690	Oryctolagus_cuniculus
ENSPKIG00000019329	pcbp3	99	96.933	ENSORLG00000022739	-	99	96.933	Oryzias_latipes
ENSPKIG00000019329	pcbp3	97	94.839	ENSORLG00000000059	pcbp3	100	96.774	Oryzias_latipes
ENSPKIG00000019329	pcbp3	97	94.839	ENSORLG00020012671	pcbp3	97	96.774	Oryzias_latipes_hni
ENSPKIG00000019329	pcbp3	100	96.508	ENSORLG00020006124	-	100	96.508	Oryzias_latipes_hni
ENSPKIG00000019329	pcbp3	99	96.933	ENSORLG00015008051	-	99	96.933	Oryzias_latipes_hsok
ENSPKIG00000019329	pcbp3	97	94.839	ENSORLG00015000429	pcbp3	97	96.774	Oryzias_latipes_hsok
ENSPKIG00000019329	pcbp3	100	96.190	ENSOMEG00000020162	-	100	96.190	Oryzias_melastigma
ENSPKIG00000019329	pcbp3	90	96.085	ENSOMEG00000020811	pcbp3	96	97.826	Oryzias_melastigma
ENSPKIG00000019329	pcbp3	98	82.500	ENSOGAG00000008044	-	99	82.500	Otolemur_garnettii
ENSPKIG00000019329	pcbp3	94	78.077	ENSPSIG00000008350	-	68	81.707	Pelodiscus_sinensis
ENSPKIG00000019329	pcbp3	98	82.175	ENSPSIG00000014970	-	98	82.779	Pelodiscus_sinensis
ENSPKIG00000019329	pcbp3	100	89.714	ENSPMGG00000022383	pcbp3	100	89.714	Periophthalmus_magnuspinnatus
ENSPKIG00000019329	pcbp3	76	88.830	ENSPMAG00000004637	-	97	88.830	Petromyzon_marinus
ENSPKIG00000019329	pcbp3	94	75.080	ENSPMAG00000004551	pcbp3	90	75.080	Petromyzon_marinus
ENSPKIG00000019329	pcbp3	98	89.021	ENSPCIG00000028092	-	90	98.030	Phascolarctos_cinereus
ENSPKIG00000019329	pcbp3	100	80.618	ENSPLAG00000011449	pcbp3	100	75.940	Poecilia_latipinna
ENSPKIG00000019329	pcbp3	99	92.901	ENSPLAG00000004074	-	92	92.901	Poecilia_latipinna
ENSPKIG00000019329	pcbp3	100	89.118	ENSPMEG00000006653	-	100	89.118	Poecilia_mexicana
ENSPKIG00000019329	pcbp3	100	88.983	ENSPMEG00000021239	pcbp3	100	88.983	Poecilia_mexicana
ENSPKIG00000019329	pcbp3	97	94.079	ENSPREG00000015736	pcbp3	99	94.079	Poecilia_reticulata
ENSPKIG00000019329	pcbp3	100	97.143	ENSPREG00000020585	-	100	97.143	Poecilia_reticulata
ENSPKIG00000019329	pcbp3	100	96.825	ENSPNYG00000013205	-	100	96.825	Pundamilia_nyererei
ENSPKIG00000019329	pcbp3	98	93.651	ENSPNYG00000012326	pcbp3	96	93.651	Pundamilia_nyererei
ENSPKIG00000019329	pcbp3	96	95.033	ENSPNAG00000008541	-	98	95.033	Pygocentrus_nattereri
ENSPKIG00000019329	pcbp3	100	95.950	ENSPNAG00000015104	pcbp3	100	95.950	Pygocentrus_nattereri
ENSPKIG00000019329	pcbp3	98	95.541	ENSRNOG00000001245	Pcbp3	98	95.541	Rattus_norvegicus
ENSPKIG00000019329	pcbp3	98	85.583	ENSRBIG00000028177	-	90	85.583	Rhinopithecus_bieti
ENSPKIG00000019329	pcbp3	98	89.521	ENSSHAG00000007890	-	99	89.521	Sarcophilus_harrisii
ENSPKIG00000019329	pcbp3	100	99.387	ENSSFOG00015010205	pcbp3	100	99.387	Scleropages_formosus
ENSPKIG00000019329	pcbp3	100	89.971	ENSSFOG00015014706	pcbp3	100	89.971	Scleropages_formosus
ENSPKIG00000019329	pcbp3	94	86.047	ENSSFOG00015007118	-	93	86.379	Scleropages_formosus
ENSPKIG00000019329	pcbp3	97	96.053	ENSSMAG00000011929	pcbp3	97	96.053	Scophthalmus_maximus
ENSPKIG00000019329	pcbp3	100	97.554	ENSSMAG00000003135	-	100	97.554	Scophthalmus_maximus
ENSPKIG00000019329	pcbp3	97	88.450	ENSSDUG00000011608	pcbp3	99	88.450	Seriola_dumerili
ENSPKIG00000019329	pcbp3	100	92.121	ENSSDUG00000008502	-	100	92.121	Seriola_dumerili
ENSPKIG00000019329	pcbp3	97	88.450	ENSSLDG00000008518	pcbp3	99	88.450	Seriola_lalandi_dorsalis
ENSPKIG00000019329	pcbp3	100	98.165	ENSSLDG00000020161	-	100	98.165	Seriola_lalandi_dorsalis
ENSPKIG00000019329	pcbp3	90	82.986	ENSSPUG00000013214	-	90	86.294	Sphenodon_punctatus
ENSPKIG00000019329	pcbp3	90	94.681	ENSSPAG00000004190	-	100	94.539	Stegastes_partitus
ENSPKIG00000019329	pcbp3	100	77.429	ENSSPAG00000023341	-	100	77.429	Stegastes_partitus
ENSPKIG00000019329	pcbp3	98	86.866	ENSTGUG00000003316	-	99	86.866	Taeniopygia_guttata
ENSPKIG00000019329	pcbp3	98	88.217	ENSTGUG00000008158	-	99	88.217	Taeniopygia_guttata
ENSPKIG00000019329	pcbp3	99	91.987	ENSTRUG00000006280	-	99	91.987	Takifugu_rubripes
ENSPKIG00000019329	pcbp3	100	91.176	ENSTRUG00000013604	pcbp3	100	91.176	Takifugu_rubripes
ENSPKIG00000019329	pcbp3	98	82.913	ENSTTRG00000015075	-	99	82.913	Tursiops_truncatus
ENSPKIG00000019329	pcbp3	98	88.024	ENSXETG00000011483	pcbp1	99	88.024	Xenopus_tropicalis
ENSPKIG00000019329	pcbp3	95	74.788	ENSXETG00000010491	pcbp2	77	74.788	Xenopus_tropicalis
ENSPKIG00000019329	pcbp3	100	88.983	ENSXCOG00000020481	pcbp3	100	88.983	Xiphophorus_couchianus
ENSPKIG00000019329	pcbp3	100	89.773	ENSXMAG00000008175	pcbp3	100	89.773	Xiphophorus_maculatus
ENSPKIG00000019329	pcbp3	100	97.859	ENSXMAG00000028711	-	100	97.859	Xiphophorus_maculatus