EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000019331 (Gene tree)
Gene ID: 111859845
Gene Symbol: rnaseh2c
Alias: -
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 5614 bases
Position: chrPGUA01000040.1:2144904-2150517
Accession: 111859845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000000782	RNase_H2_suC	PF08615.11	2.7e-16	1	1
ENSPKIP00000000800	RNase_H2_suC	PF08615.11	5.7e-16	1	1
ENSPKIP00000000809	RNase_H2_suC	PF08615.11	5.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000024683	-	1050	-	ENSPKIP00000000782	136 (aa)	XP_023698652	UPI000CD629A1
ENSPKIT00000024709	-	992	-	ENSPKIP00000000809	149 (aa)	-	-
ENSPKIT00000024700	-	1089	-	ENSPKIP00000000800	149 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000019331's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000019331's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000019331	rnaseh2c	100	61.765	ENSAPOG00000012901	rnaseh2c	99	61.765	Acanthochromis_polyacanthus
ENSPKIG00000019331	rnaseh2c	100	59.559	ENSACIG00000022433	rnaseh2c	100	59.559	Amphilophus_citrinellus
ENSPKIG00000019331	rnaseh2c	100	61.029	ENSAOCG00000016855	rnaseh2c	100	61.029	Amphiprion_ocellaris
ENSPKIG00000019331	rnaseh2c	100	61.765	ENSAPEG00000009850	rnaseh2c	100	61.765	Amphiprion_percula
ENSPKIG00000019331	rnaseh2c	100	61.765	ENSATEG00000014395	rnaseh2c	100	61.765	Anabas_testudineus
ENSPKIG00000019331	rnaseh2c	100	60.294	ENSACLG00000016950	rnaseh2c	100	60.294	Astatotilapia_calliptera
ENSPKIG00000019331	rnaseh2c	99	62.963	ENSAMXG00000001210	rnaseh2c	100	62.963	Astyanax_mexicanus
ENSPKIG00000019331	rnaseh2c	99	48.507	ENSCPBG00000023408	-	96	48.507	Chrysemys_picta_bellii
ENSPKIG00000019331	rnaseh2c	100	60.294	ENSCSEG00000005808	rnaseh2c	99	60.294	Cynoglossus_semilaevis
ENSPKIG00000019331	rnaseh2c	100	59.559	ENSCVAG00000006337	rnaseh2c	100	59.559	Cyprinodon_variegatus
ENSPKIG00000019331	rnaseh2c	100	61.029	ENSDARG00000089637	rnaseh2c	99	61.029	Danio_rerio
ENSPKIG00000019331	rnaseh2c	78	50.000	ENSEBUG00000014939	rnaseh2c	79	45.161	Eptatretus_burgeri
ENSPKIG00000019331	rnaseh2c	99	61.481	ENSELUG00000007345	rnaseh2c	99	61.481	Esox_lucius
ENSPKIG00000019331	rnaseh2c	96	57.692	ENSFHEG00000002419	rnaseh2c	96	58.779	Fundulus_heteroclitus
ENSPKIG00000019331	rnaseh2c	65	59.551	ENSGMOG00000008727	rnaseh2c	99	59.551	Gadus_morhua
ENSPKIG00000019331	rnaseh2c	100	58.824	ENSGAFG00000016755	rnaseh2c	83	58.824	Gambusia_affinis
ENSPKIG00000019331	rnaseh2c	99	48.507	ENSGAGG00000008193	-	96	48.507	Gopherus_agassizii
ENSPKIG00000019331	rnaseh2c	100	59.559	ENSHBUG00000012806	rnaseh2c	100	59.559	Haplochromis_burtoni
ENSPKIG00000019331	rnaseh2c	100	57.353	ENSHCOG00000007177	rnaseh2c	100	57.353	Hippocampus_comes
ENSPKIG00000019331	rnaseh2c	100	60.294	ENSIPUG00000018044	rnaseh2c	100	60.294	Ictalurus_punctatus
ENSPKIG00000019331	rnaseh2c	100	61.765	ENSKMAG00000004184	rnaseh2c	100	61.765	Kryptolebias_marmoratus
ENSPKIG00000019331	rnaseh2c	100	60.584	ENSLBEG00000005742	rnaseh2c	100	60.584	Labrus_bergylta
ENSPKIG00000019331	rnaseh2c	95	49.612	ENSLACG00000010120	-	92	50.000	Latimeria_chalumnae
ENSPKIG00000019331	rnaseh2c	100	59.559	ENSMAMG00000021610	rnaseh2c	100	59.559	Mastacembelus_armatus
ENSPKIG00000019331	rnaseh2c	100	60.294	ENSMZEG00005004796	rnaseh2c	100	60.294	Maylandia_zebra
ENSPKIG00000019331	rnaseh2c	100	59.559	ENSMMOG00000002869	rnaseh2c	100	59.559	Mola_mola
ENSPKIG00000019331	rnaseh2c	100	61.314	ENSMALG00000012198	rnaseh2c	100	61.314	Monopterus_albus
ENSPKIG00000019331	rnaseh2c	100	59.559	ENSNBRG00000001462	rnaseh2c	100	59.559	Neolamprologus_brichardi
ENSPKIG00000019331	rnaseh2c	100	58.824	ENSONIG00000005338	rnaseh2c	99	58.824	Oreochromis_niloticus
ENSPKIG00000019331	rnaseh2c	100	58.088	ENSORLG00000023473	rnaseh2c	100	58.088	Oryzias_latipes
ENSPKIG00000019331	rnaseh2c	100	58.088	ENSORLG00020019053	rnaseh2c	91	58.088	Oryzias_latipes_hni
ENSPKIG00000019331	rnaseh2c	100	59.559	ENSORLG00015017067	rnaseh2c	91	59.559	Oryzias_latipes_hsok
ENSPKIG00000019331	rnaseh2c	100	61.029	ENSOMEG00000018607	rnaseh2c	100	61.029	Oryzias_melastigma
ENSPKIG00000019331	rnaseh2c	100	55.882	ENSPFOG00000009415	rnaseh2c	100	55.882	Poecilia_formosa
ENSPKIG00000019331	rnaseh2c	100	56.618	ENSPLAG00000023330	rnaseh2c	100	56.618	Poecilia_latipinna
ENSPKIG00000019331	rnaseh2c	100	56.618	ENSPMEG00000003696	rnaseh2c	100	56.618	Poecilia_mexicana
ENSPKIG00000019331	rnaseh2c	100	53.741	ENSPREG00000015384	rnaseh2c	73	53.741	Poecilia_reticulata
ENSPKIG00000019331	rnaseh2c	100	59.559	ENSPNYG00000014766	rnaseh2c	100	59.559	Pundamilia_nyererei
ENSPKIG00000019331	rnaseh2c	99	60.741	ENSPNAG00000019111	rnaseh2c	99	60.741	Pygocentrus_nattereri
ENSPKIG00000019331	rnaseh2c	99	74.815	ENSSFOG00015005760	rnaseh2c	99	74.815	Scleropages_formosus
ENSPKIG00000019331	rnaseh2c	100	58.824	ENSSMAG00000017738	rnaseh2c	100	58.824	Scophthalmus_maximus
ENSPKIG00000019331	rnaseh2c	100	63.235	ENSSDUG00000017285	rnaseh2c	100	63.235	Seriola_dumerili
ENSPKIG00000019331	rnaseh2c	100	61.765	ENSSLDG00000016030	rnaseh2c	100	61.765	Seriola_lalandi_dorsalis
ENSPKIG00000019331	rnaseh2c	96	43.609	ENSSPUG00000000842	-	88	43.284	Sphenodon_punctatus
ENSPKIG00000019331	rnaseh2c	100	61.029	ENSSPAG00000007536	rnaseh2c	100	61.029	Stegastes_partitus
ENSPKIG00000019331	rnaseh2c	100	56.618	ENSTRUG00000021845	rnaseh2c	100	56.618	Takifugu_rubripes
ENSPKIG00000019331	rnaseh2c	100	58.088	ENSTNIG00000000431	rnaseh2c	100	58.088	Tetraodon_nigroviridis
ENSPKIG00000019331	rnaseh2c	88	49.167	ENSXETG00000032466	-	87	49.167	Xenopus_tropicalis
ENSPKIG00000019331	rnaseh2c	100	57.353	ENSXCOG00000001611	rnaseh2c	100	57.353	Xiphophorus_couchianus
ENSPKIG00000019331	rnaseh2c	100	58.824	ENSXMAG00000003147	rnaseh2c	83	58.824	Xiphophorus_maculatus