EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000019353 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1
Alias: -
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 270286 bases
Position: chrPGUA01000020.1:3250007-3520292
Accession: ZDB-GENE-040927-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000000832	Fox-1_C	PF12414.8	1.3e-20	1	1
ENSPKIP00000000905	Fox-1_C	PF12414.8	1.3e-20	1	1
ENSPKIP00000000883	Fox-1_C	PF12414.8	1.4e-20	1	1
ENSPKIP00000000858	Fox-1_C	PF12414.8	1.4e-20	1	1
ENSPKIP00000000848	Fox-1_C	PF12414.8	1.5e-20	1	1
ENSPKIP00000000832	RRM_1	PF00076.22	3.2e-18	1	1
ENSPKIP00000000905	RRM_1	PF00076.22	3.2e-18	1	1
ENSPKIP00000000883	RRM_1	PF00076.22	3.3e-18	1	1
ENSPKIP00000000858	RRM_1	PF00076.22	3.4e-18	1	1
ENSPKIP00000000848	RRM_1	PF00076.22	3.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000024733	-	4599	-	ENSPKIP00000000832	307 (aa)	-	-
ENSPKIT00000024749	-	4287	-	ENSPKIP00000000848	334 (aa)	-	-
ENSPKIT00000024786	-	4364	-	ENSPKIP00000000883	312 (aa)	-	-
ENSPKIT00000024836	-	1732	-	ENSPKIP00000000932	289 (aa)	-	-
ENSPKIT00000024761	-	4447	-	ENSPKIP00000000858	319 (aa)	-	-
ENSPKIT00000024807	-	1323	-	ENSPKIP00000000905	309 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000019353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000019353's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000019353	rbfox1	69	60.280	ENSPKIG00000012029	rbfox1l	61	55.466
ENSPKIG00000019353	rbfox1	86	64.528	ENSPKIG00000022633	-	78	61.404
ENSPKIG00000019353	rbfox1	62	69.110	ENSPKIG00000010816	-	55	68.750
ENSPKIG00000019353	rbfox1	86	56.537	ENSPKIG00000006854	-	66	45.513
ENSPKIG00000019353	rbfox1	86	77.985	ENSPKIG00000010299	rbfox3a	77	78.358
ENSPKIG00000019353	rbfox1	88	92.251	ENSPKIG00000009667	-	78	92.989

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000019353	rbfox1	86	92.830	ENSG00000078328	RBFOX1	100	89.947	Homo_sapiens
ENSPKIG00000019353	rbfox1	89	80.635	ENSAPOG00000003197	rbfox1	76	80.635	Acanthochromis_polyacanthus
ENSPKIG00000019353	rbfox1	71	88.991	ENSAMEG00000008605	RBFOX1	91	86.842	Ailuropoda_melanoleuca
ENSPKIG00000019353	rbfox1	87	77.931	ENSAOCG00000008283	rbfox1	99	77.931	Amphiprion_ocellaris
ENSPKIG00000019353	rbfox1	82	75.591	ENSAPEG00000010636	rbfox1	78	75.781	Amphiprion_percula
ENSPKIG00000019353	rbfox1	88	78.730	ENSATEG00000007513	rbfox1	100	78.413	Anabas_testudineus
ENSPKIG00000019353	rbfox1	86	85.517	ENSAPLG00000013263	RBFOX1	74	85.085	Anas_platyrhynchos
ENSPKIG00000019353	rbfox1	86	80.546	ENSACAG00000004013	RBFOX1	74	80.612	Anolis_carolinensis
ENSPKIG00000019353	rbfox1	86	92.075	ENSANAG00000029527	RBFOX1	71	92.481	Aotus_nancymaae
ENSPKIG00000019353	rbfox1	100	78.209	ENSAMXG00000002431	rbfox1	89	78.507	Astyanax_mexicanus
ENSPKIG00000019353	rbfox1	88	83.056	ENSBTAG00000007210	RBFOX1	80	83.056	Bos_taurus
ENSPKIG00000019353	rbfox1	86	91.698	ENSCJAG00000017351	RBFOX1	68	92.424	Callithrix_jacchus
ENSPKIG00000019353	rbfox1	86	83.562	ENSCAFG00000019082	RBFOX1	75	83.446	Canis_familiaris
ENSPKIG00000019353	rbfox1	79	82.156	ENSCAFG00020024881	RBFOX1	76	82.051	Canis_lupus_dingo
ENSPKIG00000019353	rbfox1	88	83.389	ENSCHIG00000023549	RBFOX1	80	83.389	Capra_hircus
ENSPKIG00000019353	rbfox1	86	93.156	ENSTSYG00000005334	RBFOX1	73	93.156	Carlito_syrichta
ENSPKIG00000019353	rbfox1	86	82.759	ENSCAPG00000017669	RBFOX1	75	82.759	Cavia_aperea
ENSPKIG00000019353	rbfox1	87	81.973	ENSCPOG00000011314	RBFOX1	75	81.973	Cavia_porcellus
ENSPKIG00000019353	rbfox1	86	92.075	ENSCCAG00000023031	RBFOX1	71	92.481	Cebus_capucinus
ENSPKIG00000019353	rbfox1	86	92.453	ENSCATG00000033816	RBFOX1	71	92.857	Cercocebus_atys
ENSPKIG00000019353	rbfox1	88	82.392	ENSCLAG00000012761	RBFOX1	80	82.392	Chinchilla_lanigera
ENSPKIG00000019353	rbfox1	88	84.053	ENSCSAG00000008739	RBFOX1	80	84.053	Chlorocebus_sabaeus
ENSPKIG00000019353	rbfox1	64	88.889	ENSCHOG00000012843	RBFOX1	50	86.058	Choloepus_hoffmanni
ENSPKIG00000019353	rbfox1	89	94.257	ENSCPBG00000026626	RBFOX1	90	84.466	Chrysemys_picta_bellii
ENSPKIG00000019353	rbfox1	86	92.453	ENSCANG00000033125	RBFOX1	71	92.857	Colobus_angolensis_palliatus
ENSPKIG00000019353	rbfox1	86	82.534	ENSCGRG00001013729	Rbfox1	73	82.759	Cricetulus_griseus_chok1gshd
ENSPKIG00000019353	rbfox1	86	82.534	ENSCGRG00000003272	Rbfox1	73	82.759	Cricetulus_griseus_crigri
ENSPKIG00000019353	rbfox1	82	74.632	ENSCSEG00000008840	rbfox1	74	74.632	Cynoglossus_semilaevis
ENSPKIG00000019353	rbfox1	88	89.259	ENSDARG00000014746	rbfox1	100	88.293	Danio_rerio
ENSPKIG00000019353	rbfox1	86	83.219	ENSDNOG00000043612	RBFOX1	73	80.984	Dasypus_novemcinctus
ENSPKIG00000019353	rbfox1	86	81.229	ENSDORG00000010024	Rbfox1	79	78.431	Dipodomys_ordii
ENSPKIG00000019353	rbfox1	86	67.808	ENSETEG00000003771	RBFOX1	72	66.887	Echinops_telfairi
ENSPKIG00000019353	rbfox1	89	85.246	ENSEASG00005011599	RBFOX1	75	83.721	Equus_asinus_asinus
ENSPKIG00000019353	rbfox1	89	85.574	ENSECAG00000012667	RBFOX1	80	83.721	Equus_caballus
ENSPKIG00000019353	rbfox1	62	78.641	ENSELUG00000013096	rbfox1	67	80.198	Esox_lucius
ENSPKIG00000019353	rbfox1	89	92.230	ENSFCAG00000025322	RBFOX1	72	92.230	Felis_catus
ENSPKIG00000019353	rbfox1	87	84.407	ENSFALG00000004027	RBFOX1	89	84.512	Ficedula_albicollis
ENSPKIG00000019353	rbfox1	86	83.219	ENSFDAG00000007388	RBFOX1	74	83.219	Fukomys_damarensis
ENSPKIG00000019353	rbfox1	100	83.702	ENSGALG00000034325	RBFOX1	89	84.530	Gallus_gallus
ENSPKIG00000019353	rbfox1	86	93.585	ENSGAGG00000023681	RBFOX1	80	84.385	Gopherus_agassizii
ENSPKIG00000019353	rbfox1	86	92.453	ENSGGOG00000016871	-	71	92.857	Gorilla_gorilla
ENSPKIG00000019353	rbfox1	88	82.392	ENSHGLG00000016944	RBFOX1	80	82.392	Heterocephalus_glaber_female
ENSPKIG00000019353	rbfox1	88	82.392	ENSHGLG00100003272	RBFOX1	80	82.392	Heterocephalus_glaber_male
ENSPKIG00000019353	rbfox1	82	78.927	ENSHCOG00000016419	rbfox1	76	78.927	Hippocampus_comes
ENSPKIG00000019353	rbfox1	88	88.686	ENSIPUG00000015215	rbfox1	81	88.603	Ictalurus_punctatus
ENSPKIG00000019353	rbfox1	88	83.056	ENSSTOG00000000322	RBFOX1	80	83.056	Ictidomys_tridecemlineatus
ENSPKIG00000019353	rbfox1	86	80.690	ENSJJAG00000002575	Rbfox1	73	80.479	Jaculus_jaculus
ENSPKIG00000019353	rbfox1	87	75.789	ENSLBEG00000014659	rbfox1	79	76.491	Labrus_bergylta
ENSPKIG00000019353	rbfox1	88	85.619	ENSLOCG00000006675	rbfox1	74	87.075	Lepisosteus_oculatus
ENSPKIG00000019353	rbfox1	59	83.254	ENSLAFG00000011480	RBFOX1	68	83.254	Loxodonta_africana
ENSPKIG00000019353	rbfox1	86	92.453	ENSMFAG00000036447	RBFOX1	71	92.857	Macaca_fascicularis
ENSPKIG00000019353	rbfox1	86	92.453	ENSMMUG00000003458	RBFOX1	71	92.857	Macaca_mulatta
ENSPKIG00000019353	rbfox1	88	92.701	ENSMNEG00000032034	RBFOX1	69	92.701	Macaca_nemestrina
ENSPKIG00000019353	rbfox1	86	92.453	ENSMLEG00000015382	RBFOX1	71	92.857	Mandrillus_leucophaeus
ENSPKIG00000019353	rbfox1	87	76.042	ENSMAMG00000003142	rbfox1	99	76.736	Mastacembelus_armatus
ENSPKIG00000019353	rbfox1	85	84.880	ENSMGAG00000008606	RBFOX1	98	84.615	Meleagris_gallopavo
ENSPKIG00000019353	rbfox1	86	91.698	ENSMICG00000034286	RBFOX1	80	83.389	Microcebus_murinus
ENSPKIG00000019353	rbfox1	86	82.534	ENSMOCG00000020932	Rbfox1	74	82.867	Microtus_ochrogaster
ENSPKIG00000019353	rbfox1	83	82.490	ENSMMOG00000009716	rbfox1	69	84.100	Mola_mola
ENSPKIG00000019353	rbfox1	82	85.663	ENSMODG00000005826	RBFOX1	79	85.663	Monodelphis_domestica
ENSPKIG00000019353	rbfox1	89	79.935	ENSMALG00000003337	rbfox1	73	78.417	Monopterus_albus
ENSPKIG00000019353	rbfox1	88	82.392	MGP_CAROLIEiJ_G0020427	Rbfox1	73	83.103	Mus_caroli
ENSPKIG00000019353	rbfox1	86	83.448	ENSMUSG00000008658	Rbfox1	96	82.310	Mus_musculus
ENSPKIG00000019353	rbfox1	88	82.060	MGP_PahariEiJ_G0016135	Rbfox1	73	83.103	Mus_pahari
ENSPKIG00000019353	rbfox1	88	82.392	MGP_SPRETEiJ_G0021321	Rbfox1	73	83.103	Mus_spretus
ENSPKIG00000019353	rbfox1	86	83.562	ENSMPUG00000014822	RBFOX1	75	83.446	Mustela_putorius_furo
ENSPKIG00000019353	rbfox1	59	83.254	ENSMLUG00000015896	RBFOX1	68	83.254	Myotis_lucifugus
ENSPKIG00000019353	rbfox1	86	84.138	ENSNGAG00000023276	Rbfox1	75	84.138	Nannospalax_galili
ENSPKIG00000019353	rbfox1	86	61.512	ENSNBRG00000011084	rbfox1	66	62.143	Neolamprologus_brichardi
ENSPKIG00000019353	rbfox1	86	92.830	ENSNLEG00000010017	-	71	93.233	Nomascus_leucogenys
ENSPKIG00000019353	rbfox1	71	92.661	ENSMEUG00000012525	RBFOX1	52	93.056	Notamacropus_eugenii
ENSPKIG00000019353	rbfox1	71	89.908	ENSOPRG00000006199	-	55	88.158	Ochotona_princeps
ENSPKIG00000019353	rbfox1	86	82.759	ENSODEG00000013166	RBFOX1	74	82.534	Octodon_degus
ENSPKIG00000019353	rbfox1	88	84.718	ENSOANG00000002379	RBFOX1	80	84.718	Ornithorhynchus_anatinus
ENSPKIG00000019353	rbfox1	71	88.991	ENSOCUG00000001205	-	97	88.991	Oryctolagus_cuniculus
ENSPKIG00000019353	rbfox1	88	82.432	ENSOGAG00000025535	RBFOX1	75	82.432	Otolemur_garnettii
ENSPKIG00000019353	rbfox1	71	78.440	ENSOARG00000005135	RBFOX1	87	77.027	Ovis_aries
ENSPKIG00000019353	rbfox1	86	93.156	ENSPPAG00000036238	-	73	93.156	Pan_paniscus
ENSPKIG00000019353	rbfox1	86	92.075	ENSPPRG00000006546	RBFOX1	73	90.182	Panthera_pardus
ENSPKIG00000019353	rbfox1	71	88.532	ENSPTIG00000021154	RBFOX1	61	88.532	Panthera_tigris_altaica
ENSPKIG00000019353	rbfox1	86	92.453	ENSPTRG00000007744	RBFOX1	71	92.857	Pan_troglodytes
ENSPKIG00000019353	rbfox1	86	92.453	ENSPANG00000026500	RBFOX1	71	92.857	Papio_anubis
ENSPKIG00000019353	rbfox1	88	85.382	ENSPSIG00000006523	RBFOX1	75	85.382	Pelodiscus_sinensis
ENSPKIG00000019353	rbfox1	86	82.877	ENSPEMG00000017607	Rbfox1	73	83.103	Peromyscus_maniculatus_bairdii
ENSPKIG00000019353	rbfox1	86	83.562	ENSPPYG00000007079	-	74	84.192	Pongo_abelii
ENSPKIG00000019353	rbfox1	86	75.000	ENSPCAG00000002630	RBFOX1	80	73.841	Procavia_capensis
ENSPKIG00000019353	rbfox1	86	91.698	ENSPCOG00000025687	RBFOX1	74	89.209	Propithecus_coquereli
ENSPKIG00000019353	rbfox1	86	81.507	ENSPVAG00000013467	RBFOX1	71	81.419	Pteropus_vampyrus
ENSPKIG00000019353	rbfox1	82	85.978	ENSPNAG00000023109	rbfox1	73	85.978	Pygocentrus_nattereri
ENSPKIG00000019353	rbfox1	88	82.060	ENSRNOG00000002827	Rbfox1	80	82.060	Rattus_norvegicus
ENSPKIG00000019353	rbfox1	86	93.156	ENSRBIG00000044478	RBFOX1	73	93.156	Rhinopithecus_bieti
ENSPKIG00000019353	rbfox1	86	92.453	ENSRROG00000044411	RBFOX1	86	84.192	Rhinopithecus_roxellana
ENSPKIG00000019353	rbfox1	86	91.698	ENSSBOG00000033726	RBFOX1	71	92.105	Saimiri_boliviensis_boliviensis
ENSPKIG00000019353	rbfox1	82	95.238	ENSSHAG00000009257	RBFOX1	77	95.238	Sarcophilus_harrisii
ENSPKIG00000019353	rbfox1	83	79.231	ENSSFOG00015009955	-	71	75.540	Scleropages_formosus
ENSPKIG00000019353	rbfox1	73	93.833	ENSSFOG00015023675	rbfox1	66	93.833	Scleropages_formosus
ENSPKIG00000019353	rbfox1	89	79.936	ENSSMAG00000015505	rbfox1	81	79.936	Scophthalmus_maximus
ENSPKIG00000019353	rbfox1	90	78.571	ENSSDUG00000016413	rbfox1	79	77.320	Seriola_dumerili
ENSPKIG00000019353	rbfox1	89	80.635	ENSSLDG00000009353	rbfox1	92	80.635	Seriola_lalandi_dorsalis
ENSPKIG00000019353	rbfox1	77	93.750	ENSSPUG00000009732	RBFOX1	68	93.750	Sphenodon_punctatus
ENSPKIG00000019353	rbfox1	89	79.636	ENSSPAG00000009723	rbfox1	70	82.996	Stegastes_partitus
ENSPKIG00000019353	rbfox1	86	82.534	ENSSSCG00000007917	RBFOX1	79	83.871	Sus_scrofa
ENSPKIG00000019353	rbfox1	86	85.517	ENSTGUG00000004562	RBFOX1	75	85.567	Taeniopygia_guttata
ENSPKIG00000019353	rbfox1	87	78.169	ENSTRUG00000020940	rbfox1	79	78.521	Takifugu_rubripes
ENSPKIG00000019353	rbfox1	69	67.136	ENSTNIG00000002567	rbfox1	59	74.725	Tetraodon_nigroviridis
ENSPKIG00000019353	rbfox1	86	82.534	ENSTTRG00000005700	RBFOX1	72	81.667	Tursiops_truncatus
ENSPKIG00000019353	rbfox1	81	92.000	ENSUAMG00000024633	RBFOX1	74	90.000	Ursus_americanus
ENSPKIG00000019353	rbfox1	71	90.826	ENSUMAG00000003579	RBFOX1	62	90.541	Ursus_maritimus
ENSPKIG00000019353	rbfox1	59	83.254	ENSVPAG00000001284	RBFOX1	50	83.254	Vicugna_pacos
ENSPKIG00000019353	rbfox1	99	88.599	ENSVVUG00000017311	RBFOX1	87	90.066	Vulpes_vulpes