EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000019432 (Gene tree)
Gene ID: 111848557
Gene Symbol: grsf1
Alias: -
Full Name: G-rich sequence factor 1-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 3218 bases
Position: chrPGUA01000181.1:645730-648947
Accession: 111848557
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000000972	RRM_1	PF00076.22	5.3e-26	1	2
ENSPKIP00000000972	RRM_1	PF00076.22	5.3e-26	2	2
ENSPKIP00000000991	RRM_1	PF00076.22	1.9e-21	1	2
ENSPKIP00000000991	RRM_1	PF00076.22	1.9e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000024897	-	1426	-	ENSPKIP00000000991	446 (aa)	-	-
ENSPKIT00000024876	-	1242	-	ENSPKIP00000000972	413 (aa)	XP_023676440	UPI000CD66A8F

Gene Model

Click here to download ENSPKIG00000019432's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000019432's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000019432	grsf1	73	43.305	ENSPKIG00000009532	-	81	43.305
ENSPKIG00000019432	grsf1	73	45.427	ENSPKIG00000018203	hnrnph1l	80	45.427
ENSPKIG00000019432	grsf1	74	34.135	ENSPKIG00000021343	esrp2	69	34.135
ENSPKIG00000019432	grsf1	73	62.338	ENSPKIG00000008373	HNRNPH3	71	62.338

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000019432	grsf1	80	53.433	ENSAPOG00000012487	grsf1	83	53.433	Acanthochromis_polyacanthus
ENSPKIG00000019432	grsf1	77	57.453	ENSACIG00000005871	grsf1	81	58.675	Amphilophus_citrinellus
ENSPKIG00000019432	grsf1	80	54.354	ENSAOCG00000017462	-	83	54.354	Amphiprion_ocellaris
ENSPKIG00000019432	grsf1	80	52.601	ENSAPEG00000007240	-	83	52.601	Amphiprion_percula
ENSPKIG00000019432	grsf1	80	54.192	ENSATEG00000007185	grsf1	83	54.192	Anabas_testudineus
ENSPKIG00000019432	grsf1	79	55.952	ENSACLG00000003685	-	83	55.952	Astatotilapia_calliptera
ENSPKIG00000019432	grsf1	84	49.216	ENSAMXG00000012270	grsf1	99	47.321	Astyanax_mexicanus
ENSPKIG00000019432	grsf1	80	51.553	ENSCSEG00000019209	-	92	51.840	Cynoglossus_semilaevis
ENSPKIG00000019432	grsf1	83	54.227	ENSCVAG00000004476	grsf1	87	54.227	Cyprinodon_variegatus
ENSPKIG00000019432	grsf1	80	51.057	ENSDARG00000053021	grsf1	78	51.057	Danio_rerio
ENSPKIG00000019432	grsf1	80	43.210	ENSFHEG00000013358	-	89	41.141	Fundulus_heteroclitus
ENSPKIG00000019432	grsf1	72	49.498	ENSGMOG00000014047	grsf1	81	63.636	Gadus_morhua
ENSPKIG00000019432	grsf1	95	49.246	ENSGAFG00000004496	grsf1	82	55.183	Gambusia_affinis
ENSPKIG00000019432	grsf1	77	51.703	ENSGACG00000014447	grsf1	96	51.703	Gasterosteus_aculeatus
ENSPKIG00000019432	grsf1	79	56.119	ENSHBUG00000006284	grsf1	83	56.250	Haplochromis_burtoni
ENSPKIG00000019432	grsf1	77	53.560	ENSHCOG00000007715	-	81	53.560	Hippocampus_comes
ENSPKIG00000019432	grsf1	83	53.372	ENSIPUG00000010533	grsf1	85	53.372	Ictalurus_punctatus
ENSPKIG00000019432	grsf1	82	51.453	ENSKMAG00000004528	grsf1	81	51.453	Kryptolebias_marmoratus
ENSPKIG00000019432	grsf1	72	47.333	ENSLBEG00000018100	grsf1	93	47.157	Labrus_bergylta
ENSPKIG00000019432	grsf1	79	53.293	ENSMAMG00000002627	grsf1	84	53.293	Mastacembelus_armatus
ENSPKIG00000019432	grsf1	79	55.952	ENSMZEG00005020633	-	83	55.952	Maylandia_zebra
ENSPKIG00000019432	grsf1	78	59.672	ENSMMOG00000014231	grsf1	98	59.672	Mola_mola
ENSPKIG00000019432	grsf1	79	55.030	ENSMALG00000000251	grsf1	83	55.030	Monopterus_albus
ENSPKIG00000019432	grsf1	87	52.575	ENSNBRG00000017774	grsf1	80	55.090	Neolamprologus_brichardi
ENSPKIG00000019432	grsf1	77	57.846	ENSONIG00000014119	grsf1	99	51.567	Oreochromis_niloticus
ENSPKIG00000019432	grsf1	83	54.467	ENSORLG00000030211	grsf1	86	54.467	Oryzias_latipes
ENSPKIG00000019432	grsf1	88	52.419	ENSORLG00020014383	grsf1	82	56.698	Oryzias_latipes_hni
ENSPKIG00000019432	grsf1	83	54.651	ENSORLG00015006520	grsf1	87	54.783	Oryzias_latipes_hsok
ENSPKIG00000019432	grsf1	83	55.780	ENSOMEG00000009181	grsf1	88	55.620	Oryzias_melastigma
ENSPKIG00000019432	grsf1	77	54.573	ENSPMGG00000013654	grsf1	90	54.573	Periophthalmus_magnuspinnatus
ENSPKIG00000019432	grsf1	95	47.073	ENSPFOG00000006122	grsf1	83	52.381	Poecilia_formosa
ENSPKIG00000019432	grsf1	95	47.264	ENSPLAG00000020977	grsf1	83	52.410	Poecilia_latipinna
ENSPKIG00000019432	grsf1	79	52.679	ENSPMEG00000012485	grsf1	83	52.679	Poecilia_mexicana
ENSPKIG00000019432	grsf1	95	47.772	ENSPREG00000013383	grsf1	82	52.493	Poecilia_reticulata
ENSPKIG00000019432	grsf1	88	53.973	ENSPNYG00000005379	grsf1	83	56.667	Pundamilia_nyererei
ENSPKIG00000019432	grsf1	80	57.831	ENSPNAG00000014912	grsf1	80	57.831	Pygocentrus_nattereri
ENSPKIG00000019432	grsf1	84	51.873	ENSSFOG00015014620	grsf1	86	54.949	Scleropages_formosus
ENSPKIG00000019432	grsf1	77	52.134	ENSSMAG00000014181	grsf1	69	52.134	Scophthalmus_maximus
ENSPKIG00000019432	grsf1	95	51.145	ENSSDUG00000009397	-	96	56.173	Seriola_dumerili
ENSPKIG00000019432	grsf1	77	58.228	ENSSLDG00000025494	grsf1	96	52.616	Seriola_lalandi_dorsalis
ENSPKIG00000019432	grsf1	79	53.636	ENSSPAG00000023296	grsf1	82	53.636	Stegastes_partitus
ENSPKIG00000019432	grsf1	84	54.913	ENSTRUG00000015354	grsf1	86	54.913	Takifugu_rubripes
ENSPKIG00000019432	grsf1	73	51.333	ENSTNIG00000015350	-	96	51.333	Tetraodon_nigroviridis
ENSPKIG00000019432	grsf1	79	53.354	ENSXMAG00000029710	grsf1	82	53.354	Xiphophorus_maculatus