EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000019584 (Gene tree)
Gene ID: 111848576
Gene Symbol: patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 9660 bases
Position: chrPGUA01000181.1:692996-702655
Accession: 111848576
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000001252	zf-C2H2	PF00096.26	1.1e-29	1	4
ENSPKIP00000001252	zf-C2H2	PF00096.26	1.1e-29	2	4
ENSPKIP00000001252	zf-C2H2	PF00096.26	1.1e-29	3	4
ENSPKIP00000001252	zf-C2H2	PF00096.26	1.1e-29	4	4
ENSPKIP00000001208	zf-C2H2	PF00096.26	1.7e-28	1	4
ENSPKIP00000001208	zf-C2H2	PF00096.26	1.7e-28	2	4
ENSPKIP00000001208	zf-C2H2	PF00096.26	1.7e-28	3	4
ENSPKIP00000001208	zf-C2H2	PF00096.26	1.7e-28	4	4
ENSPKIP00000001224	zf-C2H2	PF00096.26	8.1e-23	1	3
ENSPKIP00000001224	zf-C2H2	PF00096.26	8.1e-23	2	3
ENSPKIP00000001224	zf-C2H2	PF00096.26	8.1e-23	3	3
ENSPKIP00000001230	zf-C2H2	PF00096.26	1.3e-22	1	3
ENSPKIP00000001230	zf-C2H2	PF00096.26	1.3e-22	2	3
ENSPKIP00000001230	zf-C2H2	PF00096.26	1.3e-22	3	3
ENSPKIP00000001252	zf-met	PF12874.7	5e-08	1	1
ENSPKIP00000001208	zf-met	PF12874.7	4.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000025122	-	2367	-	ENSPKIP00000001208	779 (aa)	XP_023676471	UPI000CD633DC
ENSPKIT00000025169	-	2028	-	ENSPKIP00000001252	675 (aa)	-	-
ENSPKIT00000025140	-	1998	-	ENSPKIP00000001224	656 (aa)	XP_023676477	UPI000CD62405
ENSPKIT00000025147	-	2184	-	ENSPKIP00000001230	727 (aa)	XP_023676474	UPI000CD5FAEF

Gene Model

Click here to download ENSPKIG00000019584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000019584's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000019584	patz1	66	30.924	ENSPKIG00000009111	-	87	33.981
ENSPKIG00000019584	patz1	51	34.314	ENSPKIG00000017929	-	53	33.607
ENSPKIG00000019584	patz1	57	31.579	ENSPKIG00000006616	-	57	33.333
ENSPKIG00000019584	patz1	51	31.737	ENSPKIG00000001942	e4f1	53	37.838
ENSPKIG00000019584	patz1	52	34.437	ENSPKIG00000023946	znf341	52	38.519
ENSPKIG00000019584	patz1	57	30.303	ENSPKIG00000020637	PRDM15	51	32.727
ENSPKIG00000019584	patz1	58	35.632	ENSPKIG00000013932	hic1	53	42.857
ENSPKIG00000019584	patz1	68	45.000	ENSPKIG00000004089	bcl6b	92	31.624
ENSPKIG00000019584	patz1	56	31.220	ENSPKIG00000018092	zbtb41	77	42.308
ENSPKIG00000019584	patz1	52	30.653	ENSPKIG00000017781	-	64	41.463
ENSPKIG00000019584	patz1	81	33.889	ENSPKIG00000016928	znf526	54	34.969
ENSPKIG00000019584	patz1	76	32.727	ENSPKIG00000017544	zbtb24	65	33.014
ENSPKIG00000019584	patz1	80	30.638	ENSPKIG00000003781	GZF1	64	30.178
ENSPKIG00000019584	patz1	59	33.197	ENSPKIG00000015951	-	65	32.917
ENSPKIG00000019584	patz1	76	43.860	ENSPKIG00000004399	zbtb14	82	43.860
ENSPKIG00000019584	patz1	62	35.455	ENSPKIG00000006563	-	96	36.145
ENSPKIG00000019584	patz1	67	32.787	ENSPKIG00000012290	-	99	32.296
ENSPKIG00000019584	patz1	69	32.667	ENSPKIG00000008355	-	90	39.362
ENSPKIG00000019584	patz1	58	33.929	ENSPKIG00000008755	zbtb16a	55	33.929
ENSPKIG00000019584	patz1	56	36.036	ENSPKIG00000018168	znf236	72	37.037
ENSPKIG00000019584	patz1	51	30.000	ENSPKIG00000015139	znf319b	81	34.091
ENSPKIG00000019584	patz1	80	31.852	ENSPKIG00000015049	zbtb47a	60	35.294
ENSPKIG00000019584	patz1	59	36.000	ENSPKIG00000012069	-	96	38.286
ENSPKIG00000019584	patz1	69	35.780	ENSPKIG00000014483	si:ch211-236k19.4	82	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000019584	patz1	100	61.567	ENSG00000100105	PATZ1	100	62.313	Homo_sapiens
ENSPKIG00000019584	patz1	100	71.930	ENSAPOG00000018447	patz1	100	71.930	Acanthochromis_polyacanthus
ENSPKIG00000019584	patz1	100	61.798	ENSAMEG00000007074	PATZ1	100	61.938	Ailuropoda_melanoleuca
ENSPKIG00000019584	patz1	100	69.941	ENSACIG00000016779	patz1	100	69.982	Amphilophus_citrinellus
ENSPKIG00000019584	patz1	100	72.125	ENSAPEG00000013354	patz1	100	72.125	Amphiprion_percula
ENSPKIG00000019584	patz1	100	71.094	ENSATEG00000011260	patz1	100	69.432	Anabas_testudineus
ENSPKIG00000019584	patz1	88	62.562	ENSAPLG00000003934	PATZ1	99	62.397	Anas_platyrhynchos
ENSPKIG00000019584	patz1	100	61.567	ENSANAG00000029603	PATZ1	100	62.313	Aotus_nancymaae
ENSPKIG00000019584	patz1	100	66.925	ENSAMXG00000002273	patz1	100	66.058	Astyanax_mexicanus
ENSPKIG00000019584	patz1	100	61.754	ENSBTAG00000005478	PATZ1	100	62.313	Bos_taurus
ENSPKIG00000019584	patz1	100	61.567	ENSCJAG00000010978	PATZ1	100	62.313	Callithrix_jacchus
ENSPKIG00000019584	patz1	100	61.754	ENSCAFG00000013087	PATZ1	100	61.938	Canis_familiaris
ENSPKIG00000019584	patz1	100	61.754	ENSCHIG00000020203	PATZ1	100	62.313	Capra_hircus
ENSPKIG00000019584	patz1	100	61.657	ENSTSYG00000033183	PATZ1	100	62.313	Carlito_syrichta
ENSPKIG00000019584	patz1	100	61.567	ENSCCAG00000028772	PATZ1	100	62.313	Cebus_capucinus
ENSPKIG00000019584	patz1	100	61.940	ENSCATG00000006101	PATZ1	100	62.313	Cercocebus_atys
ENSPKIG00000019584	patz1	100	61.905	ENSCPBG00000011277	PATZ1	100	62.088	Chrysemys_picta_bellii
ENSPKIG00000019584	patz1	100	61.940	ENSCANG00000024972	PATZ1	100	62.313	Colobus_angolensis_palliatus
ENSPKIG00000019584	patz1	100	60.393	ENSCGRG00001004071	Patz1	100	60.674	Cricetulus_griseus_chok1gshd
ENSPKIG00000019584	patz1	94	60.163	ENSCGRG00000004814	Patz1	100	61.078	Cricetulus_griseus_crigri
ENSPKIG00000019584	patz1	100	65.242	ENSCSEG00000001385	patz1	100	65.670	Cynoglossus_semilaevis
ENSPKIG00000019584	patz1	100	71.094	ENSCVAG00000007684	patz1	100	71.094	Cyprinodon_variegatus
ENSPKIG00000019584	patz1	100	69.034	ENSDARG00000076584	patz1	100	68.972	Danio_rerio
ENSPKIG00000019584	patz1	91	61.407	ENSDNOG00000003183	PATZ1	100	61.599	Dasypus_novemcinctus
ENSPKIG00000019584	patz1	100	61.754	ENSDORG00000023834	Patz1	100	62.313	Dipodomys_ordii
ENSPKIG00000019584	patz1	100	61.567	ENSECAG00000025030	PATZ1	100	62.313	Equus_caballus
ENSPKIG00000019584	patz1	100	74.125	ENSELUG00000002333	patz1	100	73.930	Esox_lucius
ENSPKIG00000019584	patz1	100	61.754	ENSFCAG00000030253	PATZ1	100	62.313	Felis_catus
ENSPKIG00000019584	patz1	91	61.789	ENSFALG00000007450	PATZ1	100	62.439	Ficedula_albicollis
ENSPKIG00000019584	patz1	97	59.475	ENSFDAG00000005614	PATZ1	100	59.621	Fukomys_damarensis
ENSPKIG00000019584	patz1	100	71.124	ENSFHEG00000014755	patz1	100	71.262	Fundulus_heteroclitus
ENSPKIG00000019584	patz1	100	66.094	ENSGMOG00000001062	patz1	100	67.736	Gadus_morhua
ENSPKIG00000019584	patz1	100	61.667	ENSGALG00000006934	PATZ1	100	61.389	Gallus_gallus
ENSPKIG00000019584	patz1	100	70.039	ENSGAFG00000010053	patz1	100	70.233	Gambusia_affinis
ENSPKIG00000019584	patz1	90	63.182	ENSGAGG00000003214	PATZ1	100	63.182	Gopherus_agassizii
ENSPKIG00000019584	patz1	100	61.567	ENSGGOG00000017171	PATZ1	100	62.313	Gorilla_gorilla
ENSPKIG00000019584	patz1	100	68.639	ENSHCOG00000017644	patz1	99	71.375	Hippocampus_comes
ENSPKIG00000019584	patz1	100	67.520	ENSIPUG00000017653	patz1	99	64.015	Ictalurus_punctatus
ENSPKIG00000019584	patz1	100	61.567	ENSSTOG00000020707	PATZ1	100	62.127	Ictidomys_tridecemlineatus
ENSPKIG00000019584	patz1	100	61.549	ENSJJAG00000015259	Patz1	100	61.831	Jaculus_jaculus
ENSPKIG00000019584	patz1	100	67.733	ENSKMAG00000008157	patz1	100	68.023	Kryptolebias_marmoratus
ENSPKIG00000019584	patz1	100	62.947	ENSLAFG00000002317	PATZ1	100	63.233	Loxodonta_africana
ENSPKIG00000019584	patz1	100	61.940	ENSMFAG00000040968	PATZ1	100	62.313	Macaca_fascicularis
ENSPKIG00000019584	patz1	100	61.940	ENSMNEG00000037588	PATZ1	100	62.313	Macaca_nemestrina
ENSPKIG00000019584	patz1	100	61.940	ENSMLEG00000030938	PATZ1	100	62.313	Mandrillus_leucophaeus
ENSPKIG00000019584	patz1	100	71.540	ENSMAMG00000023652	patz1	100	71.540	Mastacembelus_armatus
ENSPKIG00000019584	patz1	90	57.906	ENSMGAG00000008439	PATZ1	100	59.344	Meleagris_gallopavo
ENSPKIG00000019584	patz1	100	61.567	ENSMAUG00000004129	Patz1	100	62.127	Mesocricetus_auratus
ENSPKIG00000019584	patz1	100	61.754	ENSMICG00000005430	PATZ1	100	62.500	Microcebus_murinus
ENSPKIG00000019584	patz1	100	61.381	ENSMOCG00000014488	Patz1	100	62.127	Microtus_ochrogaster
ENSPKIG00000019584	patz1	100	64.554	ENSMMOG00000021679	patz1	100	61.827	Mola_mola
ENSPKIG00000019584	patz1	100	69.667	ENSMALG00000021172	patz1	100	69.667	Monopterus_albus
ENSPKIG00000019584	patz1	100	61.517	MGP_CAROLIEiJ_G0016007	Patz1	100	62.127	Mus_caroli
ENSPKIG00000019584	patz1	100	61.381	ENSMUSG00000020453	Patz1	100	62.127	Mus_musculus
ENSPKIG00000019584	patz1	100	61.381	MGP_PahariEiJ_G0016884	Patz1	100	62.127	Mus_pahari
ENSPKIG00000019584	patz1	100	61.381	MGP_SPRETEiJ_G0016846	Patz1	100	62.127	Mus_spretus
ENSPKIG00000019584	patz1	100	62.127	ENSMLUG00000009942	PATZ1	100	62.500	Myotis_lucifugus
ENSPKIG00000019584	patz1	100	61.567	ENSNGAG00000010268	Patz1	100	62.313	Nannospalax_galili
ENSPKIG00000019584	patz1	100	70.809	ENSNBRG00000016032	patz1	100	70.809	Neolamprologus_brichardi
ENSPKIG00000019584	patz1	74	60.563	ENSMEUG00000016293	PATZ1	100	61.364	Notamacropus_eugenii
ENSPKIG00000019584	patz1	100	62.500	ENSODEG00000003589	PATZ1	100	62.687	Octodon_degus
ENSPKIG00000019584	patz1	100	72.179	ENSONIG00000004248	patz1	100	72.179	Oreochromis_niloticus
ENSPKIG00000019584	patz1	100	62.200	ENSOANG00000014654	PATZ1	100	62.623	Ornithorhynchus_anatinus
ENSPKIG00000019584	patz1	100	69.903	ENSORLG00020010937	patz1	100	69.903	Oryzias_latipes_hni
ENSPKIG00000019584	patz1	100	70.175	ENSORLG00015007396	patz1	100	70.175	Oryzias_latipes_hsok
ENSPKIG00000019584	patz1	100	70.392	ENSOMEG00000006636	patz1	100	70.392	Oryzias_melastigma
ENSPKIG00000019584	patz1	100	61.798	ENSOGAG00000027905	PATZ1	100	62.079	Otolemur_garnettii
ENSPKIG00000019584	patz1	100	61.567	ENSPPAG00000033227	PATZ1	100	62.313	Pan_paniscus
ENSPKIG00000019584	patz1	100	61.754	ENSPPRG00000001573	PATZ1	100	62.313	Panthera_pardus
ENSPKIG00000019584	patz1	90	61.698	ENSPTIG00000007937	PATZ1	90	62.541	Panthera_tigris_altaica
ENSPKIG00000019584	patz1	100	61.567	ENSPTRG00000014268	PATZ1	100	62.313	Pan_troglodytes
ENSPKIG00000019584	patz1	100	61.940	ENSPANG00000006821	PATZ1	100	61.798	Papio_anubis
ENSPKIG00000019584	patz1	60	62.136	ENSPSIG00000016553	-	90	61.893	Pelodiscus_sinensis
ENSPKIG00000019584	patz1	66	70.588	ENSPSIG00000011562	-	99	70.588	Pelodiscus_sinensis
ENSPKIG00000019584	patz1	100	69.202	ENSPMGG00000010196	patz1	100	69.202	Periophthalmus_magnuspinnatus
ENSPKIG00000019584	patz1	100	62.127	ENSPEMG00000005321	Patz1	100	62.313	Peromyscus_maniculatus_bairdii
ENSPKIG00000019584	patz1	100	70.623	ENSPLAG00000010425	patz1	100	70.817	Poecilia_latipinna
ENSPKIG00000019584	patz1	100	70.623	ENSPMEG00000000255	patz1	100	70.817	Poecilia_mexicana
ENSPKIG00000019584	patz1	100	67.373	ENSPREG00000002440	patz1	100	69.550	Poecilia_reticulata
ENSPKIG00000019584	patz1	100	61.517	ENSPPYG00000011732	PATZ1	100	61.798	Pongo_abelii
ENSPKIG00000019584	patz1	100	61.754	ENSPCOG00000019729	PATZ1	100	62.500	Propithecus_coquereli
ENSPKIG00000019584	patz1	100	61.657	ENSPVAG00000001749	PATZ1	100	61.938	Pteropus_vampyrus
ENSPKIG00000019584	patz1	100	72.320	ENSPNYG00000013542	patz1	100	72.320	Pundamilia_nyererei
ENSPKIG00000019584	patz1	88	65.440	ENSPNAG00000017222	patz1	100	64.960	Pygocentrus_nattereri
ENSPKIG00000019584	patz1	100	61.940	ENSRBIG00000044231	PATZ1	100	62.313	Rhinopithecus_bieti
ENSPKIG00000019584	patz1	100	61.940	ENSRROG00000037155	PATZ1	100	62.313	Rhinopithecus_roxellana
ENSPKIG00000019584	patz1	100	61.567	ENSSBOG00000003894	PATZ1	100	62.313	Saimiri_boliviensis_boliviensis
ENSPKIG00000019584	patz1	82	94.928	ENSSFOG00015013244	patz1	78	94.928	Scleropages_formosus
ENSPKIG00000019584	patz1	98	61.484	ENSSPUG00000015298	PATZ1	96	62.101	Sphenodon_punctatus
ENSPKIG00000019584	patz1	90	62.645	ENSSSCG00000010027	PATZ1	100	63.109	Sus_scrofa
ENSPKIG00000019584	patz1	100	68.803	ENSTRUG00000015366	patz1	100	68.234	Takifugu_rubripes
ENSPKIG00000019584	patz1	100	61.517	ENSTTRG00000010279	PATZ1	100	61.798	Tursiops_truncatus
ENSPKIG00000019584	patz1	100	61.754	ENSUAMG00000015014	PATZ1	100	62.313	Ursus_americanus
ENSPKIG00000019584	patz1	100	61.504	ENSXETG00000004190	patz1	100	61.300	Xenopus_tropicalis
ENSPKIG00000019584	patz1	100	70.623	ENSXMAG00000015531	patz1	100	70.817	Xiphophorus_maculatus