EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000019720 (Gene tree)
Gene ID: 111843040
Gene Symbol: -
Alias: -
Full Name: zinc finger CCCH-type containing 12D
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 9460 bases
Position: chrPGUA01000098.1:1957307-1966766
Accession: 111843040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000001410	RNase_Zc3h12a	PF11977.8	6.2e-63	1	1
ENSPKIP00000001419	RNase_Zc3h12a	PF11977.8	3.1e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000025338	-	897	-	ENSPKIP00000001419	298 (aa)	-	-
ENSPKIT00000025329	-	4044	-	ENSPKIP00000001410	532 (aa)	XP_023666020	UPI000CD64A82

Gene Model

Click here to download ENSPKIG00000019720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000019720's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000019720	-	74	56.579	ENSPKIG00000004769	zc3h12a	66	49.321

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000019720	-	88	50.909	ENSG00000163874	ZC3H12A	95	51.852	Homo_sapiens
ENSPKIG00000019720	-	99	50.845	ENSAPOG00000005848	-	94	51.078	Acanthochromis_polyacanthus
ENSPKIG00000019720	-	79	54.430	ENSAPOG00000001632	-	57	59.722	Acanthochromis_polyacanthus
ENSPKIG00000019720	-	76	53.750	ENSACIG00000004135	si:dkey-206d17.12	79	54.585	Amphilophus_citrinellus
ENSPKIG00000019720	-	76	71.983	ENSACIG00000006790	-	94	65.132	Amphilophus_citrinellus
ENSPKIG00000019720	-	73	55.111	ENSAOCG00000014326	-	87	54.626	Amphiprion_ocellaris
ENSPKIG00000019720	-	99	51.100	ENSAOCG00000009106	-	94	51.575	Amphiprion_ocellaris
ENSPKIG00000019720	-	88	48.443	ENSAOCG00000003866	-	85	56.087	Amphiprion_ocellaris
ENSPKIG00000019720	-	78	51.600	ENSAOCG00000001288	-	85	53.680	Amphiprion_ocellaris
ENSPKIG00000019720	-	88	48.443	ENSAPEG00000005727	-	96	46.452	Amphiprion_percula
ENSPKIG00000019720	-	78	52.000	ENSAPEG00000022263	-	85	54.113	Amphiprion_percula
ENSPKIG00000019720	-	79	52.500	ENSAPEG00000021795	si:dkey-206d17.12	87	54.185	Amphiprion_percula
ENSPKIG00000019720	-	99	51.269	ENSAPEG00000004229	-	94	51.741	Amphiprion_percula
ENSPKIG00000019720	-	98	49.562	ENSATEG00000013053	-	83	70.742	Anabas_testudineus
ENSPKIG00000019720	-	78	51.004	ENSATEG00000002260	-	83	54.468	Anabas_testudineus
ENSPKIG00000019720	-	73	53.448	ENSATEG00000006140	si:dkey-206d17.12	84	45.946	Anabas_testudineus
ENSPKIG00000019720	-	73	52.790	ENSACAG00000017285	ZC3H12A	70	48.373	Anolis_carolinensis
ENSPKIG00000019720	-	88	51.625	ENSANAG00000009908	ZC3H12A	95	51.460	Aotus_nancymaae
ENSPKIG00000019720	-	99	50.847	ENSACLG00000018534	-	93	51.273	Astatotilapia_calliptera
ENSPKIG00000019720	-	76	52.941	ENSAMXG00000029641	si:dkey-206d17.12	75	54.386	Astyanax_mexicanus
ENSPKIG00000019720	-	99	47.170	ENSAMXG00000030754	-	99	47.170	Astyanax_mexicanus
ENSPKIG00000019720	-	76	51.261	ENSAMXG00000001736	zc3h12a	51	54.348	Astyanax_mexicanus
ENSPKIG00000019720	-	84	55.385	ENSBTAG00000011316	ZC3H12A	50	62.329	Bos_taurus
ENSPKIG00000019720	-	84	54.924	ENSCAFG00000003304	ZC3H12A	51	60.403	Canis_familiaris
ENSPKIG00000019720	-	84	54.924	ENSCAFG00020008620	ZC3H12A	51	60.403	Canis_lupus_dingo
ENSPKIG00000019720	-	89	53.455	ENSCHIG00000021957	ZC3H12A	50	62.329	Capra_hircus
ENSPKIG00000019720	-	88	54.348	ENSTSYG00000035959	ZC3H12A	67	50.000	Carlito_syrichta
ENSPKIG00000019720	-	73	57.965	ENSCAPG00000015365	ZC3H12A	53	62.199	Cavia_aperea
ENSPKIG00000019720	-	73	57.522	ENSCPOG00000011081	ZC3H12A	53	61.034	Cavia_porcellus
ENSPKIG00000019720	-	88	51.799	ENSCATG00000037700	ZC3H12A	99	50.534	Cercocebus_atys
ENSPKIG00000019720	-	88	52.000	ENSCANG00000042287	ZC3H12A	99	50.534	Colobus_angolensis_palliatus
ENSPKIG00000019720	-	88	49.123	ENSCSEG00000010073	-	80	53.390	Cynoglossus_semilaevis
ENSPKIG00000019720	-	96	50.457	ENSCVAG00000001077	-	84	72.052	Cyprinodon_variegatus
ENSPKIG00000019720	-	78	52.653	ENSCVAG00000016808	-	87	56.332	Cyprinodon_variegatus
ENSPKIG00000019720	-	73	54.825	ENSCVAG00000001516	si:dkey-206d17.12	51	55.663	Cyprinodon_variegatus
ENSPKIG00000019720	-	73	53.540	ENSDARG00000005271	zc3h12a	79	59.450	Danio_rerio
ENSPKIG00000019720	-	73	41.667	ENSETEG00000018311	ZC3H12A	60	47.797	Echinops_telfairi
ENSPKIG00000019720	-	84	54.615	ENSEASG00005012220	ZC3H12A	50	60.884	Equus_asinus_asinus
ENSPKIG00000019720	-	63	61.616	ENSEEUG00000005907	ZC3H12A	53	64.015	Erinaceus_europaeus
ENSPKIG00000019720	-	80	49.012	ENSELUG00000005470	-	56	42.286	Esox_lucius
ENSPKIG00000019720	-	83	47.490	ENSELUG00000007368	si:dkey-206d17.12	52	53.313	Esox_lucius
ENSPKIG00000019720	-	99	48.735	ENSELUG00000018728	-	90	48.735	Esox_lucius
ENSPKIG00000019720	-	73	53.219	ENSFHEG00000021225	-	82	47.368	Fundulus_heteroclitus
ENSPKIG00000019720	-	74	67.544	ENSFHEG00000011425	-	94	50.091	Fundulus_heteroclitus
ENSPKIG00000019720	-	76	51.653	ENSFHEG00000001174	si:dkey-206d17.12	52	55.769	Fundulus_heteroclitus
ENSPKIG00000019720	-	57	51.212	ENSGMOG00000017975	-	66	46.819	Gadus_morhua
ENSPKIG00000019720	-	74	58.636	ENSGMOG00000014437	-	92	63.732	Gadus_morhua
ENSPKIG00000019720	-	72	48.908	ENSGMOG00000007388	-	60	52.147	Gadus_morhua
ENSPKIG00000019720	-	73	49.782	ENSGMOG00000017603	si:dkey-206d17.12	62	52.288	Gadus_morhua
ENSPKIG00000019720	-	71	52.423	ENSGAFG00000019001	si:dkey-206d17.12	52	54.828	Gambusia_affinis
ENSPKIG00000019720	-	72	55.947	ENSGAFG00000008480	zc3h12a	50	57.460	Gambusia_affinis
ENSPKIG00000019720	-	75	69.957	ENSGAFG00000009523	-	98	50.000	Gambusia_affinis
ENSPKIG00000019720	-	74	69.778	ENSGACG00000006636	-	91	71.972	Gasterosteus_aculeatus
ENSPKIG00000019720	-	73	54.867	ENSGACG00000013859	zc3h12a	56	57.055	Gasterosteus_aculeatus
ENSPKIG00000019720	-	78	50.813	ENSGACG00000002341	si:dkey-206d17.12	59	52.960	Gasterosteus_aculeatus
ENSPKIG00000019720	-	99	52.787	ENSHBUG00000021584	-	85	73.991	Haplochromis_burtoni
ENSPKIG00000019720	-	88	53.597	ENSHGLG00000012808	ZC3H12A	51	58.900	Heterocephalus_glaber_female
ENSPKIG00000019720	-	88	53.597	ENSHGLG00100002244	ZC3H12A	51	58.900	Heterocephalus_glaber_male
ENSPKIG00000019720	-	88	48.387	ENSHCOG00000008878	-	60	46.154	Hippocampus_comes
ENSPKIG00000019720	-	79	49.393	ENSHCOG00000004255	si:dkey-206d17.12	91	50.855	Hippocampus_comes
ENSPKIG00000019720	-	73	53.947	ENSIPUG00000005852	si:dkey-206d17.12	50	54.908	Ictalurus_punctatus
ENSPKIG00000019720	-	98	49.725	ENSIPUG00000011663	-	95	49.725	Ictalurus_punctatus
ENSPKIG00000019720	-	84	50.198	ENSKMAG00000002156	ZC3H12A	83	53.636	Kryptolebias_marmoratus
ENSPKIG00000019720	-	72	53.846	ENSKMAG00000013285	-	86	54.701	Kryptolebias_marmoratus
ENSPKIG00000019720	-	98	52.602	ENSKMAG00000014401	-	94	52.602	Kryptolebias_marmoratus
ENSPKIG00000019720	-	71	47.788	ENSLBEG00000017593	si:dkey-206d17.12	68	44.612	Labrus_bergylta
ENSPKIG00000019720	-	74	52.991	ENSLBEG00000012554	-	85	46.405	Labrus_bergylta
ENSPKIG00000019720	-	99	50.086	ENSLBEG00000012121	-	99	50.086	Labrus_bergylta
ENSPKIG00000019720	-	100	49.097	ENSLOCG00000017000	-	99	50.090	Lepisosteus_oculatus
ENSPKIG00000019720	-	88	51.799	ENSMFAG00000032647	ZC3H12A	99	50.534	Macaca_fascicularis
ENSPKIG00000019720	-	73	57.709	ENSMNEG00000040453	ZC3H12A	99	50.534	Macaca_nemestrina
ENSPKIG00000019720	-	88	51.799	ENSMLEG00000034570	ZC3H12A	99	50.534	Mandrillus_leucophaeus
ENSPKIG00000019720	-	84	50.758	ENSMAMG00000004483	si:dkey-206d17.12	61	48.259	Mastacembelus_armatus
ENSPKIG00000019720	-	99	50.853	ENSMAMG00000004463	-	86	72.609	Mastacembelus_armatus
ENSPKIG00000019720	-	88	47.735	ENSMAMG00000021794	-	94	49.032	Mastacembelus_armatus
ENSPKIG00000019720	-	78	51.417	ENSMZEG00005019137	-	87	48.322	Maylandia_zebra
ENSPKIG00000019720	-	99	50.847	ENSMZEG00005015555	-	93	51.273	Maylandia_zebra
ENSPKIG00000019720	-	77	52.479	ENSMZEG00005023410	ZC3H12A	77	54.585	Maylandia_zebra
ENSPKIG00000019720	-	73	58.222	ENSMGAG00000003371	ZC3H12A	51	61.074	Meleagris_gallopavo
ENSPKIG00000019720	-	100	46.569	ENSMMOG00000014855	-	89	65.665	Mola_mola
ENSPKIG00000019720	-	88	44.148	ENSMMOG00000000727	zc3h12a	92	41.261	Mola_mola
ENSPKIG00000019720	-	79	50.394	ENSMMOG00000013604	si:dkey-206d17.12	59	52.353	Mola_mola
ENSPKIG00000019720	-	78	52.000	ENSMMOG00000005728	-	89	47.059	Mola_mola
ENSPKIG00000019720	-	73	53.879	ENSMALG00000012794	si:dkey-206d17.12	50	55.853	Monopterus_albus
ENSPKIG00000019720	-	76	71.429	ENSMALG00000018908	-	99	49.913	Monopterus_albus
ENSPKIG00000019720	-	88	53.480	MGP_CAROLIEiJ_G0026462	Zc3h12a	67	52.109	Mus_caroli
ENSPKIG00000019720	-	88	53.846	ENSMUSG00000042677	Zc3h12a	67	52.357	Mus_musculus
ENSPKIG00000019720	-	88	54.212	MGP_SPRETEiJ_G0027441	Zc3h12a	97	53.309	Mus_spretus
ENSPKIG00000019720	-	84	54.789	ENSMPUG00000014758	ZC3H12A	51	60.678	Mustela_putorius_furo
ENSPKIG00000019720	-	77	57.563	ENSMLUG00000027279	ZC3H12A	53	58.544	Myotis_lucifugus
ENSPKIG00000019720	-	73	51.304	ENSNBRG00000009607	zc3h12a	50	55.238	Neolamprologus_brichardi
ENSPKIG00000019720	-	99	50.594	ENSNBRG00000010961	-	83	74.312	Neolamprologus_brichardi
ENSPKIG00000019720	-	78	52.419	ENSNBRG00000014376	si:dkey-206d17.12	54	54.711	Neolamprologus_brichardi
ENSPKIG00000019720	-	78	51.012	ENSNBRG00000012175	-	87	48.322	Neolamprologus_brichardi
ENSPKIG00000019720	-	70	45.327	ENSMEUG00000003389	ZC3H12A	51	42.254	Notamacropus_eugenii
ENSPKIG00000019720	-	56	50.955	ENSOPRG00000013711	ZC3H12A	67	50.955	Ochotona_princeps
ENSPKIG00000019720	-	73	52.609	ENSONIG00000016235	zc3h12a	76	46.606	Oreochromis_niloticus
ENSPKIG00000019720	-	78	52.419	ENSONIG00000013685	si:dkey-206d17.12	58	54.711	Oreochromis_niloticus
ENSPKIG00000019720	-	88	52.708	ENSOCUG00000010856	ZC3H12A	75	61.017	Oryctolagus_cuniculus
ENSPKIG00000019720	-	77	52.083	ENSORLG00000009473	ZC3H12A	83	53.070	Oryzias_latipes
ENSPKIG00000019720	-	99	49.126	ENSORLG00000015280	-	98	49.215	Oryzias_latipes
ENSPKIG00000019720	-	99	49.639	ENSORLG00020008580	-	84	50.089	Oryzias_latipes_hni
ENSPKIG00000019720	-	78	52.263	ENSORLG00020016107	-	53	56.187	Oryzias_latipes_hni
ENSPKIG00000019720	-	99	48.673	ENSORLG00015003680	-	86	49.215	Oryzias_latipes_hsok
ENSPKIG00000019720	-	78	51.440	ENSORLG00015007634	ZC3H12A	53	56.522	Oryzias_latipes_hsok
ENSPKIG00000019720	-	82	48.649	ENSOMEG00000005602	si:dkey-206d17.12	57	52.870	Oryzias_melastigma
ENSPKIG00000019720	-	99	48.700	ENSOMEG00000011669	-	98	49.047	Oryzias_melastigma
ENSPKIG00000019720	-	87	54.275	ENSOARG00000019760	ZC3H12A	67	61.986	Ovis_aries
ENSPKIG00000019720	-	88	51.449	ENSPPAG00000041054	ZC3H12A	99	50.534	Pan_paniscus
ENSPKIG00000019720	-	84	55.985	ENSPTIG00000012943	ZC3H12A	92	55.985	Panthera_tigris_altaica
ENSPKIG00000019720	-	88	51.449	ENSPTRG00000000544	ZC3H12A	95	51.852	Pan_troglodytes
ENSPKIG00000019720	-	88	51.799	ENSPANG00000011821	ZC3H12A	99	50.534	Papio_anubis
ENSPKIG00000019720	-	73	58.772	ENSPSIG00000009198	ZC3H12A	51	62.712	Pelodiscus_sinensis
ENSPKIG00000019720	-	73	53.097	ENSPMGG00000009790	-	53	59.310	Periophthalmus_magnuspinnatus
ENSPKIG00000019720	-	81	51.538	ENSPMGG00000004114	zc3h12a	53	58.940	Periophthalmus_magnuspinnatus
ENSPKIG00000019720	-	99	49.827	ENSPFOG00000004135	-	98	49.827	Poecilia_formosa
ENSPKIG00000019720	-	98	49.652	ENSPLAG00000001211	-	98	49.826	Poecilia_latipinna
ENSPKIG00000019720	-	73	71.622	ENSPMEG00000009279	-	88	71.622	Poecilia_mexicana
ENSPKIG00000019720	-	71	53.304	ENSPMEG00000011188	si:dkey-206d17.12	52	55.862	Poecilia_mexicana
ENSPKIG00000019720	-	99	49.313	ENSPREG00000020369	-	94	49.828	Poecilia_reticulata
ENSPKIG00000019720	-	77	53.527	ENSPREG00000001607	-	74	56.277	Poecilia_reticulata
ENSPKIG00000019720	-	99	50.847	ENSPNYG00000010663	-	93	51.273	Pundamilia_nyererei
ENSPKIG00000019720	-	99	49.577	ENSPNAG00000012124	-	99	49.577	Pygocentrus_nattereri
ENSPKIG00000019720	-	73	52.814	ENSPNAG00000015494	zc3h12a	52	54.407	Pygocentrus_nattereri
ENSPKIG00000019720	-	88	51.799	ENSRBIG00000042237	ZC3H12A	51	59.866	Rhinopithecus_bieti
ENSPKIG00000019720	-	88	51.799	ENSRROG00000037444	ZC3H12A	99	50.534	Rhinopithecus_roxellana
ENSPKIG00000019720	-	54	64.535	ENSSFOG00015005925	zc3h12a	59	62.570	Scleropages_formosus
ENSPKIG00000019720	-	73	54.310	ENSSMAG00000005140	zc3h12a	52	56.966	Scophthalmus_maximus
ENSPKIG00000019720	-	99	50.249	ENSSMAG00000017632	-	98	50.249	Scophthalmus_maximus
ENSPKIG00000019720	-	99	52.159	ENSSDUG00000010581	-	98	65.490	Seriola_dumerili
ENSPKIG00000019720	-	78	51.626	ENSSDUG00000007162	si:dkey-206d17.12	50	54.769	Seriola_dumerili
ENSPKIG00000019720	-	85	49.084	ENSSDUG00000013237	-	90	48.592	Seriola_dumerili
ENSPKIG00000019720	-	99	51.123	ENSSLDG00000022022	-	93	51.123	Seriola_lalandi_dorsalis
ENSPKIG00000019720	-	77	52.479	ENSSLDG00000009317	si:dkey-206d17.12	81	54.464	Seriola_lalandi_dorsalis
ENSPKIG00000019720	-	78	52.479	ENSSPAG00000020938	si:dkey-206d17.12	91	41.636	Stegastes_partitus
ENSPKIG00000019720	-	99	51.613	ENSSPAG00000022537	-	93	51.586	Stegastes_partitus
ENSPKIG00000019720	-	84	55.000	ENSSSCG00000037815	ZC3H12A	50	60.884	Sus_scrofa
ENSPKIG00000019720	-	79	47.451	ENSTRUG00000010565	si:dkey-206d17.12	66	46.231	Takifugu_rubripes
ENSPKIG00000019720	-	73	53.097	ENSTNIG00000001274	si:dkey-206d17.12	54	57.491	Tetraodon_nigroviridis
ENSPKIG00000019720	-	84	49.810	ENSTNIG00000014519	-	99	50.190	Tetraodon_nigroviridis
ENSPKIG00000019720	-	84	54.545	ENSUMAG00000001122	ZC3H12A	50	60.738	Ursus_maritimus
ENSPKIG00000019720	-	84	54.545	ENSVVUG00000023171	ZC3H12A	69	50.732	Vulpes_vulpes
ENSPKIG00000019720	-	74	58.150	ENSXETG00000011465	zc3h12a	53	61.905	Xenopus_tropicalis
ENSPKIG00000019720	-	75	71.616	ENSXCOG00000001538	-	91	64.865	Xiphophorus_couchianus
ENSPKIG00000019720	-	72	55.507	ENSXCOG00000008984	zc3h12a	86	48.936	Xiphophorus_couchianus
ENSPKIG00000019720	-	98	50.626	ENSXMAG00000005023	-	91	64.865	Xiphophorus_maculatus
ENSPKIG00000019720	-	71	53.478	ENSXMAG00000025043	si:dkey-206d17.12	52	55.631	Xiphophorus_maculatus
ENSPKIG00000019720	-	86	49.630	ENSXMAG00000014715	-	83	55.895	Xiphophorus_maculatus