EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000019896 (Gene tree)
Gene ID: 111849806
Gene Symbol: ptcd2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 7181 bases
Position: chrPGUA01000003.1:3025084-3032264
Accession: 111849806
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000001698	PPR	PF01535.20	2.3e-05	1	1
ENSPKIP00000001737	PPR	PF01535.20	2.4e-05	1	1
ENSPKIP00000001713	PPR	PF01535.20	2.9e-05	1	1
ENSPKIP00000001698	MRP-S27	PF10037.9	5.6e-12	1	1
ENSPKIP00000001713	MRP-S27	PF10037.9	1.6e-10	1	1
ENSPKIP00000001737	MRP-S27	PF10037.9	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000025663	-	1274	-	ENSPKIP00000001737	405 (aa)	-	-
ENSPKIT00000025639	-	1364	-	ENSPKIP00000001713	435 (aa)	-	-
ENSPKIT00000025624	-	1236	-	ENSPKIP00000001698	383 (aa)	XP_023678779	UPI000CD64E38

Gene Model

Click here to download ENSPKIG00000019896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000019896's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000019896	ptcd2	92	47.025	ENSG00000049883	PTCD2	99	44.059	Homo_sapiens
ENSPKIG00000019896	ptcd2	100	53.906	ENSAPOG00000020682	ptcd2	100	53.906	Acanthochromis_polyacanthus
ENSPKIG00000019896	ptcd2	92	47.740	ENSAMEG00000007194	PTCD2	91	47.740	Ailuropoda_melanoleuca
ENSPKIG00000019896	ptcd2	90	54.728	ENSACIG00000002053	ptcd2	100	54.728	Amphilophus_citrinellus
ENSPKIG00000019896	ptcd2	100	53.906	ENSAOCG00000006616	ptcd2	98	53.906	Amphiprion_ocellaris
ENSPKIG00000019896	ptcd2	100	53.906	ENSAPEG00000022926	ptcd2	98	53.906	Amphiprion_percula
ENSPKIG00000019896	ptcd2	100	49.091	ENSACAG00000009747	PTCD2	98	49.091	Anolis_carolinensis
ENSPKIG00000019896	ptcd2	93	48.034	ENSANAG00000029353	PTCD2	91	48.034	Aotus_nancymaae
ENSPKIG00000019896	ptcd2	100	54.922	ENSACLG00000027742	ptcd2	98	54.922	Astatotilapia_calliptera
ENSPKIG00000019896	ptcd2	87	49.701	ENSAMXG00000029404	ptcd2	89	49.701	Astyanax_mexicanus
ENSPKIG00000019896	ptcd2	93	48.596	ENSBTAG00000014675	PTCD2	92	48.596	Bos_taurus
ENSPKIG00000019896	ptcd2	93	47.191	ENSCJAG00000016364	PTCD2	91	47.191	Callithrix_jacchus
ENSPKIG00000019896	ptcd2	92	49.575	ENSCAFG00000007982	PTCD2	82	49.575	Canis_familiaris
ENSPKIG00000019896	ptcd2	90	49.138	ENSCAFG00020019147	PTCD2	97	49.138	Canis_lupus_dingo
ENSPKIG00000019896	ptcd2	93	47.472	ENSCHIG00000017118	PTCD2	92	47.472	Capra_hircus
ENSPKIG00000019896	ptcd2	93	46.518	ENSCPOG00000040168	PTCD2	93	46.518	Cavia_porcellus
ENSPKIG00000019896	ptcd2	76	47.603	ENSCCAG00000021996	-	90	47.603	Cebus_capucinus
ENSPKIG00000019896	ptcd2	93	47.472	ENSCCAG00000029389	-	91	47.472	Cebus_capucinus
ENSPKIG00000019896	ptcd2	91	48.433	ENSCATG00000019069	PTCD2	91	48.433	Cercocebus_atys
ENSPKIG00000019896	ptcd2	93	47.207	ENSCLAG00000000072	PTCD2	93	47.207	Chinchilla_lanigera
ENSPKIG00000019896	ptcd2	92	48.725	ENSCSAG00000015623	PTCD2	93	48.459	Chlorocebus_sabaeus
ENSPKIG00000019896	ptcd2	71	55.294	ENSCHOG00000010634	PTCD2	78	55.294	Choloepus_hoffmanni
ENSPKIG00000019896	ptcd2	100	47.532	ENSCPBG00000000216	PTCD2	98	47.532	Chrysemys_picta_bellii
ENSPKIG00000019896	ptcd2	92	49.148	ENSCANG00000035636	PTCD2	90	49.148	Colobus_angolensis_palliatus
ENSPKIG00000019896	ptcd2	93	48.883	ENSCGRG00001015289	Ptcd2	78	48.883	Cricetulus_griseus_chok1gshd
ENSPKIG00000019896	ptcd2	93	48.883	ENSCGRG00000006193	Ptcd2	78	48.883	Cricetulus_griseus_crigri
ENSPKIG00000019896	ptcd2	94	56.111	ENSCVAG00000001285	ptcd2	92	56.111	Cyprinodon_variegatus
ENSPKIG00000019896	ptcd2	100	49.610	ENSDARG00000035391	ptcd2	100	49.610	Danio_rerio
ENSPKIG00000019896	ptcd2	93	48.876	ENSDNOG00000008719	PTCD2	93	48.876	Dasypus_novemcinctus
ENSPKIG00000019896	ptcd2	93	48.476	ENSDORG00000004921	Ptcd2	93	48.476	Dipodomys_ordii
ENSPKIG00000019896	ptcd2	92	44.663	ENSETEG00000016542	PTCD2	90	44.663	Echinops_telfairi
ENSPKIG00000019896	ptcd2	92	47.458	ENSEASG00005018038	PTCD2	92	47.458	Equus_asinus_asinus
ENSPKIG00000019896	ptcd2	92	47.458	ENSECAG00000007022	PTCD2	91	47.458	Equus_caballus
ENSPKIG00000019896	ptcd2	93	46.067	ENSEEUG00000014031	PTCD2	91	46.067	Erinaceus_europaeus
ENSPKIG00000019896	ptcd2	100	56.218	ENSELUG00000003584	ptcd2	100	56.218	Esox_lucius
ENSPKIG00000019896	ptcd2	82	49.682	ENSFCAG00000045432	PTCD2	73	49.682	Felis_catus
ENSPKIG00000019896	ptcd2	85	45.872	ENSFALG00000010299	PTCD2	98	45.872	Ficedula_albicollis
ENSPKIG00000019896	ptcd2	92	47.740	ENSFDAG00000018461	PTCD2	92	47.740	Fukomys_damarensis
ENSPKIG00000019896	ptcd2	99	50.515	ENSGMOG00000003637	ptcd2	99	50.515	Gadus_morhua
ENSPKIG00000019896	ptcd2	92	47.059	ENSGALG00000038260	PTCD2	93	47.059	Gallus_gallus
ENSPKIG00000019896	ptcd2	100	50.000	ENSGAGG00000021952	PTCD2	98	50.000	Gopherus_agassizii
ENSPKIG00000019896	ptcd2	92	47.025	ENSGGOG00000010695	PTCD2	90	47.025	Gorilla_gorilla
ENSPKIG00000019896	ptcd2	100	54.663	ENSHBUG00000009191	ptcd2	98	54.663	Haplochromis_burtoni
ENSPKIG00000019896	ptcd2	93	48.045	ENSHGLG00000001234	PTCD2	93	48.045	Heterocephalus_glaber_female
ENSPKIG00000019896	ptcd2	93	48.045	ENSHGLG00100015419	PTCD2	93	48.045	Heterocephalus_glaber_male
ENSPKIG00000019896	ptcd2	100	51.680	ENSHCOG00000001703	ptcd2	100	51.680	Hippocampus_comes
ENSPKIG00000019896	ptcd2	91	51.862	ENSIPUG00000006080	ptcd2	95	51.226	Ictalurus_punctatus
ENSPKIG00000019896	ptcd2	93	48.459	ENSSTOG00000006596	PTCD2	93	48.459	Ictidomys_tridecemlineatus
ENSPKIG00000019896	ptcd2	93	48.596	ENSJJAG00000024388	Ptcd2	93	48.596	Jaculus_jaculus
ENSPKIG00000019896	ptcd2	92	49.859	ENSKMAG00000009329	ptcd2	92	49.859	Kryptolebias_marmoratus
ENSPKIG00000019896	ptcd2	100	52.865	ENSLBEG00000024871	ptcd2	98	52.865	Labrus_bergylta
ENSPKIG00000019896	ptcd2	100	57.922	ENSLOCG00000011122	ptcd2	100	57.922	Lepisosteus_oculatus
ENSPKIG00000019896	ptcd2	72	53.597	ENSLAFG00000004115	PTCD2	91	53.684	Loxodonta_africana
ENSPKIG00000019896	ptcd2	92	48.864	ENSMFAG00000031516	PTCD2	90	48.864	Macaca_fascicularis
ENSPKIG00000019896	ptcd2	92	48.864	ENSMNEG00000007537	PTCD2	92	48.864	Macaca_nemestrina
ENSPKIG00000019896	ptcd2	92	48.580	ENSMLEG00000031093	PTCD2	90	48.580	Mandrillus_leucophaeus
ENSPKIG00000019896	ptcd2	100	53.125	ENSMAMG00000018529	ptcd2	100	53.125	Mastacembelus_armatus
ENSPKIG00000019896	ptcd2	100	54.922	ENSMZEG00005003625	ptcd2	98	54.922	Maylandia_zebra
ENSPKIG00000019896	ptcd2	91	45.739	ENSMGAG00000005033	PTCD2	100	45.739	Meleagris_gallopavo
ENSPKIG00000019896	ptcd2	93	39.326	ENSMAUG00000020253	Ptcd2	92	39.326	Mesocricetus_auratus
ENSPKIG00000019896	ptcd2	93	47.753	ENSMICG00000004535	PTCD2	91	47.753	Microcebus_murinus
ENSPKIG00000019896	ptcd2	93	48.034	ENSMOCG00000019985	Ptcd2	93	48.034	Microtus_ochrogaster
ENSPKIG00000019896	ptcd2	92	48.023	ENSMODG00000001695	PTCD2	92	48.023	Monodelphis_domestica
ENSPKIG00000019896	ptcd2	100	53.906	ENSMALG00000022372	ptcd2	100	53.906	Monopterus_albus
ENSPKIG00000019896	ptcd2	93	47.899	MGP_CAROLIEiJ_G0018829	Ptcd2	93	47.899	Mus_caroli
ENSPKIG00000019896	ptcd2	93	47.619	ENSMUSG00000021650	Ptcd2	93	47.619	Mus_musculus
ENSPKIG00000019896	ptcd2	93	49.157	MGP_PahariEiJ_G0015904	Ptcd2	93	49.157	Mus_pahari
ENSPKIG00000019896	ptcd2	93	48.179	MGP_SPRETEiJ_G0019711	Ptcd2	93	48.179	Mus_spretus
ENSPKIG00000019896	ptcd2	93	48.596	ENSMPUG00000014401	PTCD2	93	48.596	Mustela_putorius_furo
ENSPKIG00000019896	ptcd2	92	49.008	ENSMLUG00000007374	PTCD2	90	49.008	Myotis_lucifugus
ENSPKIG00000019896	ptcd2	93	47.339	ENSNGAG00000005027	Ptcd2	93	47.339	Nannospalax_galili
ENSPKIG00000019896	ptcd2	84	56.250	ENSNBRG00000000092	-	97	56.250	Neolamprologus_brichardi
ENSPKIG00000019896	ptcd2	100	54.663	ENSNBRG00000008174	ptcd2	100	54.663	Neolamprologus_brichardi
ENSPKIG00000019896	ptcd2	92	47.025	ENSNLEG00000004516	PTCD2	90	47.025	Nomascus_leucogenys
ENSPKIG00000019896	ptcd2	79	41.722	ENSMEUG00000014012	-	82	40.764	Notamacropus_eugenii
ENSPKIG00000019896	ptcd2	93	49.444	ENSOPRG00000007290	PTCD2	91	49.444	Ochotona_princeps
ENSPKIG00000019896	ptcd2	92	49.153	ENSODEG00000016417	PTCD2	92	49.153	Octodon_degus
ENSPKIG00000019896	ptcd2	84	58.824	ENSONIG00000011269	ptcd2	94	58.824	Oreochromis_niloticus
ENSPKIG00000019896	ptcd2	92	48.023	ENSOCUG00000007970	PTCD2	92	48.023	Oryctolagus_cuniculus
ENSPKIG00000019896	ptcd2	90	54.441	ENSORLG00000003851	ptcd2	88	54.441	Oryzias_latipes
ENSPKIG00000019896	ptcd2	90	54.155	ENSORLG00020009823	ptcd2	90	54.155	Oryzias_latipes_hni
ENSPKIG00000019896	ptcd2	91	53.258	ENSORLG00015016777	ptcd2	99	53.258	Oryzias_latipes_hsok
ENSPKIG00000019896	ptcd2	90	53.890	ENSOMEG00000012396	ptcd2	84	53.890	Oryzias_melastigma
ENSPKIG00000019896	ptcd2	93	48.324	ENSOGAG00000008390	PTCD2	91	48.324	Otolemur_garnettii
ENSPKIG00000019896	ptcd2	93	47.753	ENSOARG00000005087	PTCD2	91	47.753	Ovis_aries
ENSPKIG00000019896	ptcd2	92	47.309	ENSPPAG00000028480	PTCD2	90	47.309	Pan_paniscus
ENSPKIG00000019896	ptcd2	92	46.742	ENSPTRG00000016968	PTCD2	90	46.742	Pan_troglodytes
ENSPKIG00000019896	ptcd2	90	48.266	ENSPANG00000006611	PTCD2	89	48.266	Papio_anubis
ENSPKIG00000019896	ptcd2	81	54.194	ENSPSIG00000014559	PTCD2	96	54.194	Pelodiscus_sinensis
ENSPKIG00000019896	ptcd2	93	47.911	ENSPEMG00000000884	Ptcd2	93	47.911	Peromyscus_maniculatus_bairdii
ENSPKIG00000019896	ptcd2	92	48.169	ENSPCIG00000029047	PTCD2	92	48.169	Phascolarctos_cinereus
ENSPKIG00000019896	ptcd2	93	53.186	ENSPLAG00000010456	ptcd2	95	53.425	Poecilia_latipinna
ENSPKIG00000019896	ptcd2	100	52.591	ENSPREG00000021797	ptcd2	98	52.591	Poecilia_reticulata
ENSPKIG00000019896	ptcd2	92	42.898	ENSPPYG00000015543	PTCD2	89	42.898	Pongo_abelii
ENSPKIG00000019896	ptcd2	73	45.196	ENSPCAG00000006806	PTCD2	89	45.196	Procavia_capensis
ENSPKIG00000019896	ptcd2	92	47.042	ENSPVAG00000010935	PTCD2	91	47.042	Pteropus_vampyrus
ENSPKIG00000019896	ptcd2	100	54.404	ENSPNYG00000003122	ptcd2	98	54.404	Pundamilia_nyererei
ENSPKIG00000019896	ptcd2	100	56.959	ENSPNAG00000021490	ptcd2	100	56.959	Pygocentrus_nattereri
ENSPKIG00000019896	ptcd2	93	49.162	ENSRNOG00000028403	Ptcd2	93	49.162	Rattus_norvegicus
ENSPKIG00000019896	ptcd2	92	45.042	ENSRBIG00000032929	PTCD2	90	45.042	Rhinopithecus_bieti
ENSPKIG00000019896	ptcd2	92	48.725	ENSRROG00000000080	PTCD2	92	48.725	Rhinopithecus_roxellana
ENSPKIG00000019896	ptcd2	93	46.348	ENSSBOG00000018911	PTCD2	93	46.348	Saimiri_boliviensis_boliviensis
ENSPKIG00000019896	ptcd2	92	46.328	ENSSHAG00000003833	PTCD2	91	46.328	Sarcophilus_harrisii
ENSPKIG00000019896	ptcd2	99	66.579	ENSSFOG00015015415	ptcd2	99	66.579	Scleropages_formosus
ENSPKIG00000019896	ptcd2	100	49.096	ENSSMAG00000010350	ptcd2	100	49.096	Scophthalmus_maximus
ENSPKIG00000019896	ptcd2	91	57.759	ENSSDUG00000008142	ptcd2	87	57.759	Seriola_dumerili
ENSPKIG00000019896	ptcd2	91	58.046	ENSSLDG00000015284	ptcd2	91	58.046	Seriola_lalandi_dorsalis
ENSPKIG00000019896	ptcd2	73	45.196	ENSSARG00000004983	PTCD2	90	45.196	Sorex_araneus
ENSPKIG00000019896	ptcd2	100	44.531	ENSSPUG00000000176	PTCD2	96	44.531	Sphenodon_punctatus
ENSPKIG00000019896	ptcd2	100	51.562	ENSSPAG00000008591	ptcd2	98	51.562	Stegastes_partitus
ENSPKIG00000019896	ptcd2	93	47.790	ENSSSCG00000016975	PTCD2	84	47.790	Sus_scrofa
ENSPKIG00000019896	ptcd2	90	47.564	ENSTGUG00000005705	PTCD2	99	47.564	Taeniopygia_guttata
ENSPKIG00000019896	ptcd2	93	46.518	ENSTBEG00000016559	PTCD2	91	46.518	Tupaia_belangeri
ENSPKIG00000019896	ptcd2	93	49.438	ENSTTRG00000011851	PTCD2	91	49.438	Tursiops_truncatus
ENSPKIG00000019896	ptcd2	92	48.023	ENSUAMG00000007583	PTCD2	83	48.023	Ursus_americanus
ENSPKIG00000019896	ptcd2	92	47.740	ENSUMAG00000007666	PTCD2	92	47.740	Ursus_maritimus
ENSPKIG00000019896	ptcd2	93	46.348	ENSVPAG00000009597	PTCD2	91	46.348	Vicugna_pacos
ENSPKIG00000019896	ptcd2	92	49.575	ENSVVUG00000007299	-	92	49.575	Vulpes_vulpes
ENSPKIG00000019896	ptcd2	100	46.094	ENSXETG00000031652	PTCD2	100	46.094	Xenopus_tropicalis
ENSPKIG00000019896	ptcd2	89	55.000	ENSXMAG00000005940	ptcd2	86	53.973	Xiphophorus_maculatus