EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000020050 (Gene tree)
Gene ID: 111859352
Gene Symbol: npm1b
Alias: -
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 17520 bases
Position: chrPGUA01000379.1:294535-312054
Accession: 111859352
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000001980	Nucleoplasmin	PF03066.15	6.3e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000025916	-	3148	-	ENSPKIP00000001980	309 (aa)	XP_023697695	UPI000CD674E0

Gene Model

Click here to download ENSPKIG00000020050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000020050's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000020050	npm1b	95	38.961	ENSPKIG00000023943	npm1a	96	40.260

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000020050	npm1b	99	59.306	ENSAPOG00000004268	npm1b	99	58.991	Acanthochromis_polyacanthus
ENSPKIG00000020050	npm1b	99	58.991	ENSAOCG00000012549	npm1b	99	58.675	Amphiprion_ocellaris
ENSPKIG00000020050	npm1b	99	57.413	ENSAPEG00000000868	npm1b	99	57.098	Amphiprion_percula
ENSPKIG00000020050	npm1b	99	55.414	ENSATEG00000006254	npm1b	99	58.544	Anabas_testudineus
ENSPKIG00000020050	npm1b	95	45.000	ENSACAG00000015626	-	96	45.333	Anolis_carolinensis
ENSPKIG00000020050	npm1b	99	59.871	ENSAMXG00000042148	npm1b	99	59.547	Astyanax_mexicanus
ENSPKIG00000020050	npm1b	84	35.094	ENSCAFG00000023359	-	59	40.373	Canis_familiaris
ENSPKIG00000020050	npm1b	95	45.545	ENSCPBG00000021221	-	58	45.545	Chrysemys_picta_bellii
ENSPKIG00000020050	npm1b	99	59.223	ENSCSEG00000004530	npm1b	99	58.900	Cynoglossus_semilaevis
ENSPKIG00000020050	npm1b	99	57.605	ENSCVAG00000013016	npm1b	99	57.282	Cyprinodon_variegatus
ENSPKIG00000020050	npm1b	98	65.372	ENSDARG00000037675	npm1b	99	64.401	Danio_rerio
ENSPKIG00000020050	npm1b	100	59.937	ENSELUG00000022123	npm1b	100	59.306	Esox_lucius
ENSPKIG00000020050	npm1b	94	44.710	ENSFALG00000003320	-	94	44.369	Ficedula_albicollis
ENSPKIG00000020050	npm1b	99	57.742	ENSFHEG00000020794	npm1b	99	57.006	Fundulus_heteroclitus
ENSPKIG00000020050	npm1b	98	55.298	ENSGMOG00000002689	npm1b	99	55.960	Gadus_morhua
ENSPKIG00000020050	npm1b	98	45.541	ENSGALG00000002197	-	73	46.154	Gallus_gallus
ENSPKIG00000020050	npm1b	99	57.655	ENSGAFG00000017709	npm1b	99	57.655	Gambusia_affinis
ENSPKIG00000020050	npm1b	98	57.235	ENSGACG00000016706	npm1b	99	57.878	Gasterosteus_aculeatus
ENSPKIG00000020050	npm1b	95	44.040	ENSGAGG00000020250	-	96	44.040	Gopherus_agassizii
ENSPKIG00000020050	npm1b	99	58.766	ENSHBUG00000019903	npm1b	95	58.576	Haplochromis_burtoni
ENSPKIG00000020050	npm1b	98	56.066	ENSHCOG00000003895	npm1b	98	56.066	Hippocampus_comes
ENSPKIG00000020050	npm1b	99	59.486	ENSIPUG00000020165	npm1b	99	59.164	Ictalurus_punctatus
ENSPKIG00000020050	npm1b	98	57.419	ENSKMAG00000008260	npm1b	99	59.807	Kryptolebias_marmoratus
ENSPKIG00000020050	npm1b	91	45.608	ENSLACG00000001779	-	99	47.719	Latimeria_chalumnae
ENSPKIG00000020050	npm1b	94	49.333	ENSLOCG00000001942	npm1b	100	48.000	Lepisosteus_oculatus
ENSPKIG00000020050	npm1b	72	55.794	ENSMAMG00000015335	npm1b	100	55.794	Mastacembelus_armatus
ENSPKIG00000020050	npm1b	93	45.238	ENSMGAG00000001591	-	100	45.238	Meleagris_gallopavo
ENSPKIG00000020050	npm1b	81	57.255	ENSMALG00000015383	npm1b	100	58.431	Monopterus_albus
ENSPKIG00000020050	npm1b	98	56.209	ENSONIG00000001397	npm1b	98	54.140	Oreochromis_niloticus
ENSPKIG00000020050	npm1b	98	51.475	ENSOMEG00000003414	npm1b	99	50.333	Oryzias_melastigma
ENSPKIG00000020050	npm1b	95	46.382	ENSPSIG00000011204	-	92	46.179	Pelodiscus_sinensis
ENSPKIG00000020050	npm1b	94	36.949	ENSPMAG00000004930	npm1b	100	36.149	Petromyzon_marinus
ENSPKIG00000020050	npm1b	99	58.900	ENSPFOG00000018357	npm1b	99	58.576	Poecilia_formosa
ENSPKIG00000020050	npm1b	99	61.415	ENSPNAG00000005498	npm1b	99	61.093	Pygocentrus_nattereri
ENSPKIG00000020050	npm1b	98	68.977	ENSSFOG00015005064	npm1b	99	69.967	Scleropages_formosus
ENSPKIG00000020050	npm1b	99	57.460	ENSSMAG00000008088	npm1b	99	56.825	Scophthalmus_maximus
ENSPKIG00000020050	npm1b	99	60.759	ENSSDUG00000007726	npm1b	99	60.443	Seriola_dumerili
ENSPKIG00000020050	npm1b	99	61.076	ENSSLDG00000021396	npm1b	99	60.759	Seriola_lalandi_dorsalis
ENSPKIG00000020050	npm1b	53	54.386	ENSSPUG00000017271	-	84	54.386	Sphenodon_punctatus
ENSPKIG00000020050	npm1b	54	48.851	ENSSPUG00000015604	-	85	48.851	Sphenodon_punctatus
ENSPKIG00000020050	npm1b	99	58.044	ENSSPAG00000011152	npm1b	99	57.729	Stegastes_partitus
ENSPKIG00000020050	npm1b	93	43.581	ENSTGUG00000014970	-	100	43.919	Taeniopygia_guttata
ENSPKIG00000020050	npm1b	99	57.282	ENSTRUG00000008105	npm1b	95	57.282	Takifugu_rubripes
ENSPKIG00000020050	npm1b	98	56.494	ENSTNIG00000013057	npm1b	99	56.494	Tetraodon_nigroviridis
ENSPKIG00000020050	npm1b	97	45.752	ENSXETG00000008403	npm1	96	44.079	Xenopus_tropicalis
ENSPKIG00000020050	npm1b	99	57.282	ENSXMAG00000001986	npm1b	99	57.929	Xiphophorus_maculatus