EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000020085 (Gene tree)
Gene ID: 111843875
Gene Symbol: scrt1a
Alias: -
Full Name: scratch family transcriptional repressor 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 3203 bases
Position: chrPGUA01000014.1:1818053-1821255
Accession: 111843875
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000002027	zf-C2H2	PF00096.26	2.4e-26	1	4
ENSPKIP00000002027	zf-C2H2	PF00096.26	2.4e-26	2	4
ENSPKIP00000002027	zf-C2H2	PF00096.26	2.4e-26	3	4
ENSPKIP00000002027	zf-C2H2	PF00096.26	2.4e-26	4	4
ENSPKIP00000002027	zf-met	PF12874.7	6.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000025964	-	2276	-	ENSPKIP00000002027	279 (aa)	XP_023667584	UPI000CD63A21

Gene Model

Click here to download ENSPKIG00000020085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000020085's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000020085	scrt1a	50	57.554	ENSPKIG00000002254	SNAI2	99	41.429
ENSPKIG00000020085	scrt1a	79	44.000	ENSPKIG00000018168	znf236	62	44.000
ENSPKIG00000020085	scrt1a	52	50.000	ENSPKIG00000006393	snai1a	98	37.676
ENSPKIG00000020085	scrt1a	55	41.071	ENSPKIG00000006616	-	57	41.071
ENSPKIG00000020085	scrt1a	63	36.364	ENSPKIG00000012069	-	96	37.121
ENSPKIG00000020085	scrt1a	50	34.532	ENSPKIG00000020324	-	53	34.646
ENSPKIG00000020085	scrt1a	59	39.241	ENSPKIG00000018092	zbtb41	60	32.117
ENSPKIG00000020085	scrt1a	56	38.060	ENSPKIG00000006563	-	99	38.060
ENSPKIG00000020085	scrt1a	100	92.115	ENSPKIG00000022303	SCRT1	100	92.115
ENSPKIG00000020085	scrt1a	95	36.986	ENSPKIG00000007872	SNAI3	99	36.986
ENSPKIG00000020085	scrt1a	53	37.383	ENSPKIG00000017781	-	72	37.383
ENSPKIG00000020085	scrt1a	83	36.283	ENSPKIG00000012290	-	96	49.315
ENSPKIG00000020085	scrt1a	68	41.071	ENSPKIG00000007643	gfi1b	58	41.071
ENSPKIG00000020085	scrt1a	54	42.667	ENSPKIG00000015492	prdm5	51	37.391
ENSPKIG00000020085	scrt1a	50	36.047	ENSPKIG00000001492	-	50	36.047
ENSPKIG00000020085	scrt1a	55	37.681	ENSPKIG00000015951	-	70	37.681
ENSPKIG00000020085	scrt1a	58	35.714	ENSPKIG00000002670	-	53	35.714
ENSPKIG00000020085	scrt1a	71	41.176	ENSPKIG00000009111	-	91	37.419

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000020085	scrt1a	99	80.282	ENSAPOG00000015197	-	99	80.282	Acanthochromis_polyacanthus
ENSPKIG00000020085	scrt1a	97	69.928	ENSAPOG00000003680	scrt2	96	69.928	Acanthochromis_polyacanthus
ENSPKIG00000020085	scrt1a	100	86.833	ENSAPOG00000009279	scrt1b	100	86.833	Acanthochromis_polyacanthus
ENSPKIG00000020085	scrt1a	99	78.523	ENSACIG00000006586	-	99	78.523	Amphilophus_citrinellus
ENSPKIG00000020085	scrt1a	100	83.688	ENSACIG00000013613	scrt1b	100	83.688	Amphilophus_citrinellus
ENSPKIG00000020085	scrt1a	97	68.841	ENSACIG00000012604	scrt2	96	68.841	Amphilophus_citrinellus
ENSPKIG00000020085	scrt1a	96	59.333	ENSACIG00000001296	-	96	59.333	Amphilophus_citrinellus
ENSPKIG00000020085	scrt1a	99	78.523	ENSAOCG00000023304	-	99	78.523	Amphiprion_ocellaris
ENSPKIG00000020085	scrt1a	97	69.928	ENSAOCG00000021557	scrt2	96	69.928	Amphiprion_ocellaris
ENSPKIG00000020085	scrt1a	100	86.833	ENSAOCG00000003910	scrt1b	100	86.833	Amphiprion_ocellaris
ENSPKIG00000020085	scrt1a	99	78.523	ENSAPEG00000005677	-	99	78.523	Amphiprion_percula
ENSPKIG00000020085	scrt1a	97	69.928	ENSAPEG00000022558	scrt2	96	69.928	Amphiprion_percula
ENSPKIG00000020085	scrt1a	100	86.833	ENSAPEG00000000869	scrt1b	100	86.833	Amphiprion_percula
ENSPKIG00000020085	scrt1a	100	87.189	ENSATEG00000002302	scrt1b	100	87.189	Anabas_testudineus
ENSPKIG00000020085	scrt1a	96	54.430	ENSATEG00000003195	-	97	54.430	Anabas_testudineus
ENSPKIG00000020085	scrt1a	99	80.282	ENSATEG00000011660	-	99	80.282	Anabas_testudineus
ENSPKIG00000020085	scrt1a	97	66.667	ENSATEG00000023998	scrt2	97	66.667	Anabas_testudineus
ENSPKIG00000020085	scrt1a	77	76.636	ENSACAG00000016109	SCRT2	95	76.636	Anolis_carolinensis
ENSPKIG00000020085	scrt1a	100	86.121	ENSACLG00000007162	scrt1b	100	86.121	Astatotilapia_calliptera
ENSPKIG00000020085	scrt1a	99	76.080	ENSACLG00000012046	-	99	76.080	Astatotilapia_calliptera
ENSPKIG00000020085	scrt1a	100	89.247	ENSAMXG00000038085	scrt1a	100	89.247	Astyanax_mexicanus
ENSPKIG00000020085	scrt1a	88	69.170	ENSAMXG00000034158	scrt2	92	69.170	Astyanax_mexicanus
ENSPKIG00000020085	scrt1a	98	82.609	ENSAMXG00000042624	SCRT1	99	82.609	Astyanax_mexicanus
ENSPKIG00000020085	scrt1a	58	60.494	WBGene00000468	ces-1	60	59.756	Caenorhabditis_elegans
ENSPKIG00000020085	scrt1a	99	87.050	ENSCPBG00000018899	SCRT1	99	87.050	Chrysemys_picta_bellii
ENSPKIG00000020085	scrt1a	86	62.800	ENSCPBG00000027613	SCRT2	100	62.800	Chrysemys_picta_bellii
ENSPKIG00000020085	scrt1a	88	48.988	ENSCGRG00000001380	Scrt2	100	48.988	Cricetulus_griseus_crigri
ENSPKIG00000020085	scrt1a	97	66.337	ENSCSEG00000021542	scrt2	97	67.327	Cynoglossus_semilaevis
ENSPKIG00000020085	scrt1a	99	76.689	ENSCSEG00000014892	-	99	76.689	Cynoglossus_semilaevis
ENSPKIG00000020085	scrt1a	100	86.833	ENSCSEG00000008596	scrt1b	100	86.833	Cynoglossus_semilaevis
ENSPKIG00000020085	scrt1a	99	79.195	ENSCVAG00000003190	-	99	79.195	Cyprinodon_variegatus
ENSPKIG00000020085	scrt1a	100	86.121	ENSCVAG00000009561	scrt1b	100	86.121	Cyprinodon_variegatus
ENSPKIG00000020085	scrt1a	97	65.696	ENSCVAG00000021038	scrt2	97	65.696	Cyprinodon_variegatus
ENSPKIG00000020085	scrt1a	100	91.398	ENSDARG00000100821	scrt1a	100	91.398	Danio_rerio
ENSPKIG00000020085	scrt1a	100	90.323	ENSDARG00000040214	scrt1b	100	90.323	Danio_rerio
ENSPKIG00000020085	scrt1a	100	92.143	ENSELUG00000005435	scrt1b	100	92.143	Esox_lucius
ENSPKIG00000020085	scrt1a	99	91.727	ENSELUG00000022228	scrt1a	99	91.727	Esox_lucius
ENSPKIG00000020085	scrt1a	96	66.554	ENSELUG00000023883	scrt2	95	66.216	Esox_lucius
ENSPKIG00000020085	scrt1a	83	71.674	ENSFALG00000005718	SCRT2	97	71.674	Ficedula_albicollis
ENSPKIG00000020085	scrt1a	97	61.111	ENSFDAG00000008733	SCRT1	97	61.111	Fukomys_damarensis
ENSPKIG00000020085	scrt1a	100	85.765	ENSFHEG00000014820	scrt1b	100	85.765	Fundulus_heteroclitus
ENSPKIG00000020085	scrt1a	99	78.188	ENSFHEG00000009794	-	99	78.188	Fundulus_heteroclitus
ENSPKIG00000020085	scrt1a	97	71.377	ENSFHEG00000005732	scrt2	96	71.377	Fundulus_heteroclitus
ENSPKIG00000020085	scrt1a	97	61.165	ENSGMOG00000019519	scrt2	96	61.165	Gadus_morhua
ENSPKIG00000020085	scrt1a	99	84.286	ENSGMOG00000000629	scrt1b	100	84.286	Gadus_morhua
ENSPKIG00000020085	scrt1a	57	96.774	ENSGMOG00000013833	-	54	96.774	Gadus_morhua
ENSPKIG00000020085	scrt1a	97	64.469	ENSGALG00000028912	SCRT2	97	64.388	Gallus_gallus
ENSPKIG00000020085	scrt1a	99	79.505	ENSGAFG00000009650	-	99	79.505	Gambusia_affinis
ENSPKIG00000020085	scrt1a	97	67.003	ENSGAFG00000003093	scrt2	97	67.003	Gambusia_affinis
ENSPKIG00000020085	scrt1a	100	85.409	ENSGAFG00000007636	scrt1b	100	85.409	Gambusia_affinis
ENSPKIG00000020085	scrt1a	99	77.551	ENSGACG00000004072	-	99	77.551	Gasterosteus_aculeatus
ENSPKIG00000020085	scrt1a	99	84.229	ENSGACG00000008982	scrt1b	99	84.229	Gasterosteus_aculeatus
ENSPKIG00000020085	scrt1a	96	64.855	ENSGAGG00000020761	SCRT2	96	64.855	Gopherus_agassizii
ENSPKIG00000020085	scrt1a	66	79.781	ENSGAGG00000020760	-	71	79.781	Gopherus_agassizii
ENSPKIG00000020085	scrt1a	99	88.043	ENSGAGG00000011736	SCRT1	100	88.043	Gopherus_agassizii
ENSPKIG00000020085	scrt1a	97	69.928	ENSHBUG00000012492	scrt2	96	69.928	Haplochromis_burtoni
ENSPKIG00000020085	scrt1a	100	86.121	ENSHBUG00000016621	scrt1b	100	86.121	Haplochromis_burtoni
ENSPKIG00000020085	scrt1a	99	78.523	ENSHBUG00000019101	-	99	78.523	Haplochromis_burtoni
ENSPKIG00000020085	scrt1a	97	66.553	ENSHCOG00000008116	scrt2	97	66.553	Hippocampus_comes
ENSPKIG00000020085	scrt1a	100	86.121	ENSHCOG00000016704	scrt1b	100	86.121	Hippocampus_comes
ENSPKIG00000020085	scrt1a	99	72.069	ENSHCOG00000016179	-	99	72.069	Hippocampus_comes
ENSPKIG00000020085	scrt1a	98	77.372	ENSIPUG00000005547	-	99	77.372	Ictalurus_punctatus
ENSPKIG00000020085	scrt1a	99	89.568	ENSIPUG00000004551	scrt1a	99	89.568	Ictalurus_punctatus
ENSPKIG00000020085	scrt1a	51	83.688	ENSSTOG00000032944	SCRT2	82	80.392	Ictidomys_tridecemlineatus
ENSPKIG00000020085	scrt1a	100	85.765	ENSKMAG00000005484	scrt1b	100	85.765	Kryptolebias_marmoratus
ENSPKIG00000020085	scrt1a	99	76.589	ENSKMAG00000009489	-	99	77.926	Kryptolebias_marmoratus
ENSPKIG00000020085	scrt1a	97	66.343	ENSKMAG00000018087	scrt2	97	66.343	Kryptolebias_marmoratus
ENSPKIG00000020085	scrt1a	97	65.806	ENSLBEG00000015419	scrt2	97	65.806	Labrus_bergylta
ENSPKIG00000020085	scrt1a	99	75.758	ENSLBEG00000023388	-	99	76.431	Labrus_bergylta
ENSPKIG00000020085	scrt1a	100	90.681	ENSLACG00000003588	SCRT1	99	90.681	Latimeria_chalumnae
ENSPKIG00000020085	scrt1a	100	94.624	ENSLOCG00000007573	scrt1b	100	94.624	Lepisosteus_oculatus
ENSPKIG00000020085	scrt1a	97	54.369	ENSLOCG00000002246	scrt2	97	54.369	Lepisosteus_oculatus
ENSPKIG00000020085	scrt1a	96	91.111	ENSMFAG00000035496	SCRT1	95	56.318	Macaca_fascicularis
ENSPKIG00000020085	scrt1a	100	86.121	ENSMAMG00000011698	scrt1b	100	86.121	Mastacembelus_armatus
ENSPKIG00000020085	scrt1a	97	66.019	ENSMAMG00000001291	scrt2	97	66.019	Mastacembelus_armatus
ENSPKIG00000020085	scrt1a	100	86.121	ENSMZEG00005005627	scrt1b	100	86.121	Maylandia_zebra
ENSPKIG00000020085	scrt1a	97	69.928	ENSMZEG00005026445	scrt2	96	69.928	Maylandia_zebra
ENSPKIG00000020085	scrt1a	99	78.523	ENSMZEG00005026702	-	99	78.523	Maylandia_zebra
ENSPKIG00000020085	scrt1a	83	70.259	ENSMGAG00000016579	SCRT2	97	70.259	Meleagris_gallopavo
ENSPKIG00000020085	scrt1a	97	66.340	ENSMMOG00000009272	scrt2	97	67.320	Mola_mola
ENSPKIG00000020085	scrt1a	99	78.523	ENSMMOG00000018345	-	99	78.523	Mola_mola
ENSPKIG00000020085	scrt1a	100	84.698	ENSMMOG00000003327	scrt1b	100	84.698	Mola_mola
ENSPKIG00000020085	scrt1a	97	68.345	ENSMALG00000013656	scrt2	96	68.345	Monopterus_albus
ENSPKIG00000020085	scrt1a	100	86.477	ENSMALG00000012704	scrt1b	100	86.477	Monopterus_albus
ENSPKIG00000020085	scrt1a	51	83.688	ENSNGAG00000020815	Scrt2	71	82.192	Nannospalax_galili
ENSPKIG00000020085	scrt1a	100	83.630	ENSNBRG00000013983	scrt1b	100	83.630	Neolamprologus_brichardi
ENSPKIG00000020085	scrt1a	99	78.188	ENSNBRG00000014882	-	99	78.188	Neolamprologus_brichardi
ENSPKIG00000020085	scrt1a	97	69.565	ENSNBRG00000007221	scrt2	96	69.565	Neolamprologus_brichardi
ENSPKIG00000020085	scrt1a	96	62.681	ENSONIG00000003152	-	96	62.681	Oreochromis_niloticus
ENSPKIG00000020085	scrt1a	97	65.696	ENSONIG00000016758	scrt2	97	66.019	Oreochromis_niloticus
ENSPKIG00000020085	scrt1a	100	85.409	ENSONIG00000006007	scrt1b	100	85.409	Oreochromis_niloticus
ENSPKIG00000020085	scrt1a	97	73.856	ENSONIG00000019809	-	100	73.856	Oreochromis_niloticus
ENSPKIG00000020085	scrt1a	100	85.765	ENSORLG00000025651	scrt1b	100	85.765	Oryzias_latipes
ENSPKIG00000020085	scrt1a	97	66.667	ENSORLG00000024051	scrt2	97	66.667	Oryzias_latipes
ENSPKIG00000020085	scrt1a	99	76.333	ENSORLG00000022825	-	99	76.333	Oryzias_latipes
ENSPKIG00000020085	scrt1a	97	66.667	ENSORLG00020011478	scrt2	97	66.667	Oryzias_latipes_hni
ENSPKIG00000020085	scrt1a	100	85.765	ENSORLG00020012967	scrt1b	100	85.765	Oryzias_latipes_hni
ENSPKIG00000020085	scrt1a	97	66.667	ENSORLG00015005524	scrt2	97	66.667	Oryzias_latipes_hsok
ENSPKIG00000020085	scrt1a	99	75.667	ENSORLG00015010104	-	99	75.667	Oryzias_latipes_hsok
ENSPKIG00000020085	scrt1a	100	85.765	ENSORLG00015019165	scrt1b	100	85.765	Oryzias_latipes_hsok
ENSPKIG00000020085	scrt1a	100	85.765	ENSOMEG00000003925	scrt1b	100	85.765	Oryzias_melastigma
ENSPKIG00000020085	scrt1a	99	79.195	ENSOMEG00000000286	-	99	79.195	Oryzias_melastigma
ENSPKIG00000020085	scrt1a	97	66.990	ENSOMEG00000002661	scrt2	97	66.990	Oryzias_melastigma
ENSPKIG00000020085	scrt1a	99	78.571	ENSPMGG00000021402	-	99	78.571	Periophthalmus_magnuspinnatus
ENSPKIG00000020085	scrt1a	97	73.551	ENSPMGG00000016561	scrt2	96	73.551	Periophthalmus_magnuspinnatus
ENSPKIG00000020085	scrt1a	100	85.357	ENSPMGG00000002260	scrt1b	100	85.357	Periophthalmus_magnuspinnatus
ENSPKIG00000020085	scrt1a	97	66.019	ENSPFOG00000007738	scrt2	97	66.019	Poecilia_formosa
ENSPKIG00000020085	scrt1a	100	85.409	ENSPFOG00000017719	scrt1b	100	85.409	Poecilia_formosa
ENSPKIG00000020085	scrt1a	99	77.778	ENSPFOG00000005616	-	99	77.778	Poecilia_formosa
ENSPKIG00000020085	scrt1a	99	77.778	ENSPLAG00000011718	-	99	77.778	Poecilia_latipinna
ENSPKIG00000020085	scrt1a	97	71.480	ENSPLAG00000005765	scrt2	96	71.480	Poecilia_latipinna
ENSPKIG00000020085	scrt1a	100	85.409	ENSPLAG00000009876	scrt1b	100	85.409	Poecilia_latipinna
ENSPKIG00000020085	scrt1a	99	77.778	ENSPMEG00000011706	-	99	77.778	Poecilia_mexicana
ENSPKIG00000020085	scrt1a	97	71.480	ENSPMEG00000001538	scrt2	96	71.480	Poecilia_mexicana
ENSPKIG00000020085	scrt1a	100	85.409	ENSPMEG00000013274	scrt1b	100	85.409	Poecilia_mexicana
ENSPKIG00000020085	scrt1a	99	77.441	ENSPREG00000012166	-	99	77.441	Poecilia_reticulata
ENSPKIG00000020085	scrt1a	100	85.409	ENSPREG00000018985	scrt1b	100	85.409	Poecilia_reticulata
ENSPKIG00000020085	scrt1a	97	66.019	ENSPREG00000001147	scrt2	97	66.019	Poecilia_reticulata
ENSPKIG00000020085	scrt1a	100	86.121	ENSPNYG00000017733	scrt1b	100	86.121	Pundamilia_nyererei
ENSPKIG00000020085	scrt1a	99	78.523	ENSPNYG00000008865	-	99	78.523	Pundamilia_nyererei
ENSPKIG00000020085	scrt1a	97	69.928	ENSPNYG00000013109	scrt2	96	69.928	Pundamilia_nyererei
ENSPKIG00000020085	scrt1a	100	90.681	ENSPNAG00000017415	scrt1a	100	90.681	Pygocentrus_nattereri
ENSPKIG00000020085	scrt1a	98	83.273	ENSPNAG00000027880	-	99	83.273	Pygocentrus_nattereri
ENSPKIG00000020085	scrt1a	100	90.681	ENSSFOG00015001195	SCRT1	100	90.681	Scleropages_formosus
ENSPKIG00000020085	scrt1a	99	76.333	ENSSMAG00000005122	-	99	76.333	Scophthalmus_maximus
ENSPKIG00000020085	scrt1a	99	85.357	ENSSMAG00000019207	scrt1b	99	85.357	Scophthalmus_maximus
ENSPKIG00000020085	scrt1a	99	79.195	ENSSDUG00000013215	-	99	79.195	Seriola_dumerili
ENSPKIG00000020085	scrt1a	100	86.477	ENSSDUG00000007752	scrt1b	100	86.477	Seriola_dumerili
ENSPKIG00000020085	scrt1a	98	65.993	ENSSDUG00000001637	scrt2	96	66.330	Seriola_dumerili
ENSPKIG00000020085	scrt1a	99	79.195	ENSSLDG00000016454	-	99	79.195	Seriola_lalandi_dorsalis
ENSPKIG00000020085	scrt1a	100	86.477	ENSSLDG00000017166	scrt1b	100	86.477	Seriola_lalandi_dorsalis
ENSPKIG00000020085	scrt1a	97	65.696	ENSSLDG00000013565	scrt2	97	66.019	Seriola_lalandi_dorsalis
ENSPKIG00000020085	scrt1a	97	66.790	ENSSPUG00000018637	SCRT2	97	66.790	Sphenodon_punctatus
ENSPKIG00000020085	scrt1a	100	86.477	ENSSPAG00000002200	scrt1b	100	86.477	Stegastes_partitus
ENSPKIG00000020085	scrt1a	97	70.290	ENSSPAG00000014018	scrt2	96	70.290	Stegastes_partitus
ENSPKIG00000020085	scrt1a	99	77.852	ENSSPAG00000006788	-	99	79.195	Stegastes_partitus
ENSPKIG00000020085	scrt1a	83	71.552	ENSTGUG00000006801	SCRT2	99	71.552	Taeniopygia_guttata
ENSPKIG00000020085	scrt1a	98	84.420	ENSTRUG00000011637	scrt1b	99	84.420	Takifugu_rubripes
ENSPKIG00000020085	scrt1a	86	77.778	ENSTRUG00000019558	-	81	77.778	Takifugu_rubripes
ENSPKIG00000020085	scrt1a	97	67.698	ENSTRUG00000007620	scrt2	97	67.698	Takifugu_rubripes
ENSPKIG00000020085	scrt1a	99	77.778	ENSTRUG00000012719	-	99	77.778	Takifugu_rubripes
ENSPKIG00000020085	scrt1a	97	71.685	ENSTNIG00000012473	scrt2	97	71.685	Tetraodon_nigroviridis
ENSPKIG00000020085	scrt1a	100	83.630	ENSTNIG00000018384	scrt1b	100	83.630	Tetraodon_nigroviridis
ENSPKIG00000020085	scrt1a	97	67.340	ENSXCOG00000014367	scrt2	97	67.340	Xiphophorus_couchianus
ENSPKIG00000020085	scrt1a	100	85.053	ENSXCOG00000019675	scrt1b	100	85.053	Xiphophorus_couchianus
ENSPKIG00000020085	scrt1a	99	78.445	ENSXCOG00000019861	-	99	78.445	Xiphophorus_couchianus
ENSPKIG00000020085	scrt1a	97	66.019	ENSXMAG00000028567	scrt2	97	66.019	Xiphophorus_maculatus
ENSPKIG00000020085	scrt1a	99	77.441	ENSXMAG00000015353	-	99	77.441	Xiphophorus_maculatus
ENSPKIG00000020085	scrt1a	100	85.053	ENSXMAG00000027885	scrt1b	100	85.053	Xiphophorus_maculatus