EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000020669 (Gene tree)
Gene ID: 111853484
Gene Symbol: sf3b4
Alias: -
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 4627 bases
Position: chrPGUA01000257.1:389523-394149
Accession: 111853484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000002972	RRM_1	PF00076.22	3.1e-39	1	2
ENSPKIP00000002972	RRM_1	PF00076.22	3.1e-39	2	2
ENSPKIP00000002984	RRM_1	PF00076.22	3.7e-39	1	2
ENSPKIP00000002984	RRM_1	PF00076.22	3.7e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000026941	-	1802	XM_023830420	ENSPKIP00000002984	399 (aa)	XP_023686188	UPI000CD63681
ENSPKIT00000026929	-	2044	-	ENSPKIP00000002972	377 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000020669's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000020669's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000020669	sf3b4	60	98.246	ENSG00000143368	SF3B4	100	96.842	Homo_sapiens
ENSPKIG00000020669	sf3b4	64	98.354	ENSAPOG00000017647	sf3b4	61	98.354	Acanthochromis_polyacanthus
ENSPKIG00000020669	sf3b4	60	98.246	ENSAMEG00000010073	SF3B4	55	97.425	Ailuropoda_melanoleuca
ENSPKIG00000020669	sf3b4	61	97.835	ENSACIG00000018455	sf3b4	69	97.009	Amphilophus_citrinellus
ENSPKIG00000020669	sf3b4	64	98.354	ENSAOCG00000019801	sf3b4	61	98.354	Amphiprion_ocellaris
ENSPKIG00000020669	sf3b4	64	98.354	ENSAPEG00000010365	sf3b4	61	98.354	Amphiprion_percula
ENSPKIG00000020669	sf3b4	72	96.324	ENSATEG00000012844	sf3b4	60	97.531	Anabas_testudineus
ENSPKIG00000020669	sf3b4	57	100.000	ENSACAG00000010019	SF3B4	56	97.845	Anolis_carolinensis
ENSPKIG00000020669	sf3b4	60	98.246	ENSANAG00000031025	SF3B4	55	97.425	Aotus_nancymaae
ENSPKIG00000020669	sf3b4	71	94.403	ENSACLG00000014260	sf3b4	61	97.119	Astatotilapia_calliptera
ENSPKIG00000020669	sf3b4	75	96.809	ENSAMXG00000008282	sf3b4	70	96.809	Astyanax_mexicanus
ENSPKIG00000020669	sf3b4	54	96.535	ENSBTAG00000012793	-	51	95.652	Bos_taurus
ENSPKIG00000020669	sf3b4	60	98.246	ENSBTAG00000012495	SF3B4	55	97.425	Bos_taurus
ENSPKIG00000020669	sf3b4	75	67.785	WBGene00004723	sap-49	54	81.991	Caenorhabditis_elegans
ENSPKIG00000020669	sf3b4	60	98.246	ENSCAFG00000011617	SF3B4	55	97.425	Canis_familiaris
ENSPKIG00000020669	sf3b4	60	98.246	ENSCAFG00020019775	SF3B4	55	97.425	Canis_lupus_dingo
ENSPKIG00000020669	sf3b4	82	58.696	ENSCHIG00000006654	-	50	74.627	Capra_hircus
ENSPKIG00000020669	sf3b4	60	98.246	ENSCHIG00000025663	-	55	97.425	Capra_hircus
ENSPKIG00000020669	sf3b4	60	98.246	ENSTSYG00000009295	SF3B4	55	97.425	Carlito_syrichta
ENSPKIG00000020669	sf3b4	65	89.848	ENSCAPG00000006451	SF3B4	50	96.629	Cavia_aperea
ENSPKIG00000020669	sf3b4	60	98.246	ENSCPOG00000008267	SF3B4	55	97.425	Cavia_porcellus
ENSPKIG00000020669	sf3b4	80	71.519	ENSCCAG00000019823	-	50	88.095	Cebus_capucinus
ENSPKIG00000020669	sf3b4	57	97.368	ENSCCAG00000021751	-	53	96.567	Cebus_capucinus
ENSPKIG00000020669	sf3b4	60	98.246	ENSCATG00000033114	SF3B4	55	97.425	Cercocebus_atys
ENSPKIG00000020669	sf3b4	60	98.246	ENSCLAG00000015851	SF3B4	55	97.425	Chinchilla_lanigera
ENSPKIG00000020669	sf3b4	60	98.246	ENSCSAG00000018129	SF3B4	55	97.425	Chlorocebus_sabaeus
ENSPKIG00000020669	sf3b4	57	100.000	ENSCPBG00000008041	SF3B4	56	97.845	Chrysemys_picta_bellii
ENSPKIG00000020669	sf3b4	57	90.654	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSPKIG00000020669	sf3b4	55	91.429	ENSCSAVG00000007809	-	88	89.697	Ciona_savignyi
ENSPKIG00000020669	sf3b4	60	98.246	ENSCANG00000035579	SF3B4	55	97.425	Colobus_angolensis_palliatus
ENSPKIG00000020669	sf3b4	60	98.246	ENSCGRG00001003590	Sf3b4	55	97.425	Cricetulus_griseus_chok1gshd
ENSPKIG00000020669	sf3b4	60	98.246	ENSCGRG00000016914	Sf3b4	55	97.425	Cricetulus_griseus_crigri
ENSPKIG00000020669	sf3b4	70	94.318	ENSCVAG00000005536	sf3b4	59	94.828	Cyprinodon_variegatus
ENSPKIG00000020669	sf3b4	64	97.531	ENSDARG00000018574	sf3b4	61	97.531	Danio_rerio
ENSPKIG00000020669	sf3b4	97	63.990	ENSDNOG00000037231	-	56	82.432	Dasypus_novemcinctus
ENSPKIG00000020669	sf3b4	58	92.727	ENSDNOG00000048908	-	52	94.064	Dasypus_novemcinctus
ENSPKIG00000020669	sf3b4	60	98.246	ENSDORG00000016366	Sf3b4	55	97.425	Dipodomys_ordii
ENSPKIG00000020669	sf3b4	60	88.158	ENSETEG00000008963	SF3B4	55	87.554	Echinops_telfairi
ENSPKIG00000020669	sf3b4	60	98.246	ENSEASG00005001477	SF3B4	55	97.425	Equus_asinus_asinus
ENSPKIG00000020669	sf3b4	60	98.246	ENSECAG00000024737	SF3B4	55	97.425	Equus_caballus
ENSPKIG00000020669	sf3b4	92	92.000	ENSELUG00000012876	sf3b4	60	99.177	Esox_lucius
ENSPKIG00000020669	sf3b4	60	98.246	ENSFCAG00000010106	SF3B4	55	97.425	Felis_catus
ENSPKIG00000020669	sf3b4	60	98.246	ENSFDAG00000009286	SF3B4	55	97.425	Fukomys_damarensis
ENSPKIG00000020669	sf3b4	58	98.261	ENSGMOG00000002519	sf3b4	69	97.009	Gadus_morhua
ENSPKIG00000020669	sf3b4	57	100.000	ENSGALG00000013352	SF3B4	56	98.276	Gallus_gallus
ENSPKIG00000020669	sf3b4	70	96.226	ENSGAFG00000010181	sf3b4	59	98.718	Gambusia_affinis
ENSPKIG00000020669	sf3b4	60	100.000	ENSGACG00000003819	sf3b4	59	98.718	Gasterosteus_aculeatus
ENSPKIG00000020669	sf3b4	82	71.203	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSPKIG00000020669	sf3b4	60	98.246	ENSGGOG00000004761	SF3B4	55	97.425	Gorilla_gorilla
ENSPKIG00000020669	sf3b4	71	94.403	ENSHBUG00000002028	sf3b4	61	97.119	Haplochromis_burtoni
ENSPKIG00000020669	sf3b4	60	98.246	ENSHGLG00000012360	SF3B4	55	97.425	Heterocephalus_glaber_female
ENSPKIG00000020669	sf3b4	60	98.246	ENSHGLG00100008533	SF3B4	55	97.425	Heterocephalus_glaber_male
ENSPKIG00000020669	sf3b4	60	97.357	ENSHCOG00000003014	sf3b4	57	96.943	Hippocampus_comes
ENSPKIG00000020669	sf3b4	60	98.246	ENSSTOG00000000684	-	55	97.425	Ictidomys_tridecemlineatus
ENSPKIG00000020669	sf3b4	59	71.852	ENSJJAG00000022500	Sf3b4	56	71.429	Jaculus_jaculus
ENSPKIG00000020669	sf3b4	95	84.656	ENSKMAG00000008154	sf3b4	62	97.942	Kryptolebias_marmoratus
ENSPKIG00000020669	sf3b4	62	98.712	ENSLBEG00000026818	sf3b4	58	99.138	Labrus_bergylta
ENSPKIG00000020669	sf3b4	64	95.417	ENSLACG00000004436	SF3B4	66	95.417	Latimeria_chalumnae
ENSPKIG00000020669	sf3b4	64	97.917	ENSLOCG00000009048	sf3b4	57	97.917	Lepisosteus_oculatus
ENSPKIG00000020669	sf3b4	82	78.593	ENSLAFG00000008531	SF3B4	55	97.425	Loxodonta_africana
ENSPKIG00000020669	sf3b4	60	98.246	ENSMFAG00000042395	SF3B4	55	97.425	Macaca_fascicularis
ENSPKIG00000020669	sf3b4	93	61.316	ENSMFAG00000039067	-	59	79.091	Macaca_fascicularis
ENSPKIG00000020669	sf3b4	60	98.246	ENSMMUG00000007256	SF3B4	55	97.425	Macaca_mulatta
ENSPKIG00000020669	sf3b4	60	98.246	ENSMNEG00000031839	SF3B4	55	97.425	Macaca_nemestrina
ENSPKIG00000020669	sf3b4	80	66.129	ENSMNEG00000031526	-	59	78.636	Macaca_nemestrina
ENSPKIG00000020669	sf3b4	60	98.246	ENSMLEG00000038667	SF3B4	55	97.425	Mandrillus_leucophaeus
ENSPKIG00000020669	sf3b4	77	95.172	ENSMAMG00000014692	sf3b4	71	95.390	Mastacembelus_armatus
ENSPKIG00000020669	sf3b4	71	94.403	ENSMZEG00005026741	sf3b4	61	97.119	Maylandia_zebra
ENSPKIG00000020669	sf3b4	57	100.000	ENSMGAG00000000653	SF3B4	56	98.276	Meleagris_gallopavo
ENSPKIG00000020669	sf3b4	60	98.246	ENSMAUG00000015266	Sf3b4	55	97.425	Mesocricetus_auratus
ENSPKIG00000020669	sf3b4	60	98.246	ENSMICG00000044961	SF3B4	55	97.425	Microcebus_murinus
ENSPKIG00000020669	sf3b4	60	98.246	ENSMOCG00000013658	-	55	97.425	Microtus_ochrogaster
ENSPKIG00000020669	sf3b4	54	98.049	ENSMOCG00000014155	-	55	95.089	Microtus_ochrogaster
ENSPKIG00000020669	sf3b4	61	99.130	ENSMMOG00000018032	sf3b4	60	98.718	Mola_mola
ENSPKIG00000020669	sf3b4	60	98.246	ENSMODG00000018767	SF3B4	55	97.425	Monodelphis_domestica
ENSPKIG00000020669	sf3b4	71	94.424	ENSMALG00000006174	sf3b4	60	97.531	Monopterus_albus
ENSPKIG00000020669	sf3b4	60	98.246	MGP_CAROLIEiJ_G0025365	Sf3b4	55	97.425	Mus_caroli
ENSPKIG00000020669	sf3b4	60	98.246	ENSMUSG00000068856	Sf3b4	55	97.425	Mus_musculus
ENSPKIG00000020669	sf3b4	60	98.246	MGP_PahariEiJ_G0026809	Sf3b4	55	97.425	Mus_pahari
ENSPKIG00000020669	sf3b4	60	98.246	MGP_SPRETEiJ_G0026309	Sf3b4	55	97.425	Mus_spretus
ENSPKIG00000020669	sf3b4	60	98.246	ENSMPUG00000005563	SF3B4	55	97.425	Mustela_putorius_furo
ENSPKIG00000020669	sf3b4	60	98.246	ENSMLUG00000010789	SF3B4	55	97.425	Myotis_lucifugus
ENSPKIG00000020669	sf3b4	60	98.246	ENSNGAG00000016337	Sf3b4	55	97.425	Nannospalax_galili
ENSPKIG00000020669	sf3b4	71	94.776	ENSNBRG00000013865	sf3b4	61	97.531	Neolamprologus_brichardi
ENSPKIG00000020669	sf3b4	92	48.780	ENSNLEG00000009693	-	83	48.780	Nomascus_leucogenys
ENSPKIG00000020669	sf3b4	99	64.663	ENSNLEG00000000537	-	59	87.983	Nomascus_leucogenys
ENSPKIG00000020669	sf3b4	60	93.860	ENSOPRG00000010808	SF3B4	55	93.133	Ochotona_princeps
ENSPKIG00000020669	sf3b4	88	67.049	ENSODEG00000003597	-	59	80.498	Octodon_degus
ENSPKIG00000020669	sf3b4	92	61.111	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSPKIG00000020669	sf3b4	71	94.403	ENSONIG00000002730	sf3b4	61	97.119	Oreochromis_niloticus
ENSPKIG00000020669	sf3b4	69	73.234	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSPKIG00000020669	sf3b4	60	98.246	ENSOCUG00000004614	SF3B4	55	97.425	Oryctolagus_cuniculus
ENSPKIG00000020669	sf3b4	62	98.707	ENSORLG00000003062	sf3b4	60	98.707	Oryzias_latipes
ENSPKIG00000020669	sf3b4	62	98.707	ENSORLG00020000687	sf3b4	58	98.707	Oryzias_latipes_hni
ENSPKIG00000020669	sf3b4	62	98.707	ENSORLG00015010989	sf3b4	58	98.707	Oryzias_latipes_hsok
ENSPKIG00000020669	sf3b4	62	99.138	ENSOMEG00000013694	sf3b4	59	98.718	Oryzias_melastigma
ENSPKIG00000020669	sf3b4	60	98.246	ENSOGAG00000006265	SF3B4	55	97.425	Otolemur_garnettii
ENSPKIG00000020669	sf3b4	60	98.246	ENSOARG00000020718	-	55	97.425	Ovis_aries
ENSPKIG00000020669	sf3b4	77	71.000	ENSOARG00000007368	-	56	80.786	Ovis_aries
ENSPKIG00000020669	sf3b4	83	74.923	ENSPPAG00000030024	-	57	87.124	Pan_paniscus
ENSPKIG00000020669	sf3b4	60	98.246	ENSPPAG00000040904	SF3B4	55	97.425	Pan_paniscus
ENSPKIG00000020669	sf3b4	60	98.246	ENSPPRG00000007384	SF3B4	55	97.425	Panthera_pardus
ENSPKIG00000020669	sf3b4	60	98.246	ENSPTIG00000014530	SF3B4	55	97.425	Panthera_tigris_altaica
ENSPKIG00000020669	sf3b4	83	74.921	ENSPTRG00000049727	-	58	87.554	Pan_troglodytes
ENSPKIG00000020669	sf3b4	60	98.246	ENSPTRG00000001243	SF3B4	55	97.425	Pan_troglodytes
ENSPKIG00000020669	sf3b4	60	98.246	ENSPANG00000005126	SF3B4	55	97.425	Papio_anubis
ENSPKIG00000020669	sf3b4	50	97.354	ENSPSIG00000009565	SF3B4	69	97.354	Pelodiscus_sinensis
ENSPKIG00000020669	sf3b4	60	98.246	ENSPEMG00000017568	Sf3b4	55	97.425	Peromyscus_maniculatus_bairdii
ENSPKIG00000020669	sf3b4	56	95.305	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSPKIG00000020669	sf3b4	60	98.246	ENSPCIG00000008765	SF3B4	55	97.425	Phascolarctos_cinereus
ENSPKIG00000020669	sf3b4	71	95.131	ENSPFOG00000005754	sf3b4	62	97.119	Poecilia_formosa
ENSPKIG00000020669	sf3b4	71	95.131	ENSPLAG00000001401	sf3b4	67	97.119	Poecilia_latipinna
ENSPKIG00000020669	sf3b4	71	95.131	ENSPREG00000011076	sf3b4	60	97.119	Poecilia_reticulata
ENSPKIG00000020669	sf3b4	55	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSPKIG00000020669	sf3b4	60	98.246	ENSPCOG00000015399	SF3B4	55	97.425	Propithecus_coquereli
ENSPKIG00000020669	sf3b4	60	98.246	ENSPVAG00000014171	SF3B4	55	97.425	Pteropus_vampyrus
ENSPKIG00000020669	sf3b4	71	94.403	ENSPNYG00000012700	sf3b4	61	97.119	Pundamilia_nyererei
ENSPKIG00000020669	sf3b4	76	96.181	ENSPNAG00000000686	sf3b4	72	96.127	Pygocentrus_nattereri
ENSPKIG00000020669	sf3b4	60	98.246	ENSRNOG00000021181	Sf3b4	55	97.425	Rattus_norvegicus
ENSPKIG00000020669	sf3b4	60	98.246	ENSRBIG00000043392	SF3B4	55	97.425	Rhinopithecus_bieti
ENSPKIG00000020669	sf3b4	92	58.718	ENSRROG00000028213	-	57	74.222	Rhinopithecus_roxellana
ENSPKIG00000020669	sf3b4	60	98.246	ENSRROG00000029366	SF3B4	55	97.425	Rhinopithecus_roxellana
ENSPKIG00000020669	sf3b4	82	65.312	ENSSBOG00000025174	-	50	75.966	Saimiri_boliviensis_boliviensis
ENSPKIG00000020669	sf3b4	60	97.807	ENSSBOG00000012310	-	55	96.996	Saimiri_boliviensis_boliviensis
ENSPKIG00000020669	sf3b4	60	93.421	ENSSHAG00000004043	SF3B4	54	92.704	Sarcophilus_harrisii
ENSPKIG00000020669	sf3b4	75	98.582	ENSSFOG00015008864	sf3b4	69	98.582	Scleropages_formosus
ENSPKIG00000020669	sf3b4	94	86.842	ENSSMAG00000006837	sf3b4	61	98.765	Scophthalmus_maximus
ENSPKIG00000020669	sf3b4	77	96.207	ENSSDUG00000012064	sf3b4	70	96.454	Seriola_dumerili
ENSPKIG00000020669	sf3b4	77	96.207	ENSSLDG00000014226	sf3b4	70	96.454	Seriola_lalandi_dorsalis
ENSPKIG00000020669	sf3b4	65	95.122	ENSSPUG00000001028	SF3B4	58	97.845	Sphenodon_punctatus
ENSPKIG00000020669	sf3b4	77	97.241	ENSSPAG00000019219	sf3b4	70	97.518	Stegastes_partitus
ENSPKIG00000020669	sf3b4	99	51.870	ENSSSCG00000039440	-	57	63.948	Sus_scrofa
ENSPKIG00000020669	sf3b4	82	78.834	ENSSSCG00000006665	-	55	97.425	Sus_scrofa
ENSPKIG00000020669	sf3b4	63	97.046	ENSTGUG00000004470	SF3B4	91	98.276	Taeniopygia_guttata
ENSPKIG00000020669	sf3b4	84	87.188	ENSTRUG00000004516	sf3b4	59	97.863	Takifugu_rubripes
ENSPKIG00000020669	sf3b4	61	99.130	ENSTNIG00000009156	sf3b4	60	98.718	Tetraodon_nigroviridis
ENSPKIG00000020669	sf3b4	60	98.246	ENSTTRG00000005217	SF3B4	55	97.425	Tursiops_truncatus
ENSPKIG00000020669	sf3b4	60	98.246	ENSUAMG00000022468	SF3B4	55	97.425	Ursus_americanus
ENSPKIG00000020669	sf3b4	60	98.246	ENSUMAG00000003802	SF3B4	55	97.425	Ursus_maritimus
ENSPKIG00000020669	sf3b4	57	98.148	ENSVPAG00000008152	SF3B4	54	97.285	Vicugna_pacos
ENSPKIG00000020669	sf3b4	60	98.246	ENSVVUG00000007732	-	60	97.425	Vulpes_vulpes
ENSPKIG00000020669	sf3b4	81	82.026	ENSXETG00000011038	sf3b4	60	94.667	Xenopus_tropicalis
ENSPKIG00000020669	sf3b4	71	96.255	ENSXCOG00000019895	sf3b4	62	98.354	Xiphophorus_couchianus
ENSPKIG00000020669	sf3b4	70	96.970	ENSXMAG00000003772	sf3b4	62	98.354	Xiphophorus_maculatus