EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000020805 (Gene tree)
Gene ID: 111850155
Gene Symbol: rbm4.1
Alias: -
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 7174 bases
Position: chrPGUA01000103.1:2038822-2045995
Accession: 111850155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000003188	zf-CCHC	PF00098.23	2.7e-07	1	1
ENSPKIP00000003188	RRM_5	PF13893.6	4.9e-09	1	1
ENSPKIP00000003196	RRM_5	PF13893.6	1.9e-08	1	1
ENSPKIP00000003196	RRM_1	PF00076.22	2.9e-33	1	2
ENSPKIP00000003196	RRM_1	PF00076.22	2.9e-33	2	2
ENSPKIP00000003188	RRM_1	PF00076.22	1.5e-32	1	2
ENSPKIP00000003188	RRM_1	PF00076.22	1.5e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000027155	-	505	-	ENSPKIP00000003196	163 (aa)	-	-
ENSPKIT00000027147	-	4572	-	ENSPKIP00000003188	423 (aa)	XP_023679541	UPI000CD5CAD9

Gene Model

Click here to download ENSPKIG00000020805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000020805's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000020805	rbm4.1	87	60.145	ENSPKIG00000007001	rbm4.3	84	58.940

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000020805	rbm4.1	85	79.710	ENSAPOG00000012353	rbm4.1	100	64.252	Acanthochromis_polyacanthus
ENSPKIG00000020805	rbm4.1	85	67.391	ENSAPOG00000012375	-	97	67.391	Acanthochromis_polyacanthus
ENSPKIG00000020805	rbm4.1	85	68.116	ENSACIG00000016472	-	86	67.376	Amphilophus_citrinellus
ENSPKIG00000020805	rbm4.1	100	64.486	ENSACIG00000016482	rbm4.1	100	65.187	Amphilophus_citrinellus
ENSPKIG00000020805	rbm4.1	85	79.710	ENSAOCG00000010915	rbm4.1	100	63.785	Amphiprion_ocellaris
ENSPKIG00000020805	rbm4.1	85	68.116	ENSAOCG00000010907	-	97	68.116	Amphiprion_ocellaris
ENSPKIG00000020805	rbm4.1	85	79.710	ENSAPEG00000009494	rbm4.1	100	63.785	Amphiprion_percula
ENSPKIG00000020805	rbm4.1	85	68.116	ENSAPEG00000009476	-	88	67.376	Amphiprion_percula
ENSPKIG00000020805	rbm4.1	100	70.803	ENSATEG00000001912	-	90	70.803	Anabas_testudineus
ENSPKIG00000020805	rbm4.1	85	81.159	ENSATEG00000001904	rbm4.1	100	64.252	Anabas_testudineus
ENSPKIG00000020805	rbm4.1	85	79.710	ENSACLG00000007722	rbm4.1	100	64.953	Astatotilapia_calliptera
ENSPKIG00000020805	rbm4.1	85	69.565	ENSACLG00000007740	-	99	45.735	Astatotilapia_calliptera
ENSPKIG00000020805	rbm4.1	100	66.667	ENSAMXG00000032121	rbm4.2	89	65.493	Astyanax_mexicanus
ENSPKIG00000020805	rbm4.1	87	86.232	ENSAMXG00000036611	rbm4.1	100	64.319	Astyanax_mexicanus
ENSPKIG00000020805	rbm4.1	96	45.570	ENSCPBG00000023666	-	99	45.570	Chrysemys_picta_bellii
ENSPKIG00000020805	rbm4.1	85	72.464	ENSCSEG00000007739	-	100	72.464	Cynoglossus_semilaevis
ENSPKIG00000020805	rbm4.1	100	58.080	ENSCSEG00000014365	rbm4.1	100	57.377	Cynoglossus_semilaevis
ENSPKIG00000020805	rbm4.1	85	79.710	ENSCVAG00000019349	rbm4.1	100	60.514	Cyprinodon_variegatus
ENSPKIG00000020805	rbm4.1	87	84.058	ENSDARG00000036386	rbm4.1	100	67.447	Danio_rerio
ENSPKIG00000020805	rbm4.1	86	62.500	ENSEBUG00000008142	-	50	63.536	Eptatretus_burgeri
ENSPKIG00000020805	rbm4.1	86	61.429	ENSEBUG00000007174	-	97	57.471	Eptatretus_burgeri
ENSPKIG00000020805	rbm4.1	85	84.058	ENSELUG00000013205	rbm4.1	100	64.103	Esox_lucius
ENSPKIG00000020805	rbm4.1	85	82.609	ENSFHEG00000022926	rbm4.1	100	60.839	Fundulus_heteroclitus
ENSPKIG00000020805	rbm4.1	85	68.116	ENSFHEG00000003483	-	92	67.857	Fundulus_heteroclitus
ENSPKIG00000020805	rbm4.1	85	80.435	ENSGMOG00000007464	rbm4.1	100	59.674	Gadus_morhua
ENSPKIG00000020805	rbm4.1	85	71.739	ENSGMOG00000007455	-	99	48.492	Gadus_morhua
ENSPKIG00000020805	rbm4.1	85	68.116	ENSGAFG00000019301	-	92	67.143	Gambusia_affinis
ENSPKIG00000020805	rbm4.1	85	80.435	ENSGAFG00000019302	rbm4.1	100	59.302	Gambusia_affinis
ENSPKIG00000020805	rbm4.1	87	76.812	ENSGACG00000000822	rbm4.1	97	80.663	Gasterosteus_aculeatus
ENSPKIG00000020805	rbm4.1	85	66.667	ENSGACG00000000821	-	99	46.588	Gasterosteus_aculeatus
ENSPKIG00000020805	rbm4.1	96	45.570	ENSGAGG00000014558	-	99	45.570	Gopherus_agassizii
ENSPKIG00000020805	rbm4.1	85	79.710	ENSHBUG00000011610	rbm4.1	100	64.953	Haplochromis_burtoni
ENSPKIG00000020805	rbm4.1	85	69.565	ENSHBUG00000011624	-	90	69.565	Haplochromis_burtoni
ENSPKIG00000020805	rbm4.1	85	65.942	ENSHCOG00000011413	-	85	64.384	Hippocampus_comes
ENSPKIG00000020805	rbm4.1	93	78.986	ENSHCOG00000011403	rbm4.1	99	55.037	Hippocampus_comes
ENSPKIG00000020805	rbm4.1	87	84.783	ENSIPUG00000022931	rbm4.1	100	64.760	Ictalurus_punctatus
ENSPKIG00000020805	rbm4.1	85	76.087	ENSIPUG00000022937	rbm4.2	100	53.846	Ictalurus_punctatus
ENSPKIG00000020805	rbm4.1	85	78.261	ENSKMAG00000006556	rbm4.1	100	59.251	Kryptolebias_marmoratus
ENSPKIG00000020805	rbm4.1	85	65.217	ENSKMAG00000006528	-	99	43.578	Kryptolebias_marmoratus
ENSPKIG00000020805	rbm4.1	87	68.085	ENSLBEG00000019756	-	86	68.085	Labrus_bergylta
ENSPKIG00000020805	rbm4.1	100	62.763	ENSLBEG00000019782	rbm4.1	100	62.295	Labrus_bergylta
ENSPKIG00000020805	rbm4.1	87	51.773	ENSLACG00000006343	zgc:77262	52	52.027	Latimeria_chalumnae
ENSPKIG00000020805	rbm4.1	91	79.195	ENSLOCG00000002772	rbm4.1	100	79.195	Lepisosteus_oculatus
ENSPKIG00000020805	rbm4.1	85	73.188	ENSMAMG00000001760	-	98	46.119	Mastacembelus_armatus
ENSPKIG00000020805	rbm4.1	85	79.710	ENSMAMG00000001765	rbm4.1	100	64.252	Mastacembelus_armatus
ENSPKIG00000020805	rbm4.1	85	64.493	ENSMZEG00005009210	-	77	64.493	Maylandia_zebra
ENSPKIG00000020805	rbm4.1	85	64.493	ENSMZEG00005028161	-	82	61.905	Maylandia_zebra
ENSPKIG00000020805	rbm4.1	90	67.123	ENSMZEG00005028160	-	99	67.123	Maylandia_zebra
ENSPKIG00000020805	rbm4.1	85	79.710	ENSMZEG00005009205	rbm4.1	100	64.953	Maylandia_zebra
ENSPKIG00000020805	rbm4.1	60	32.319	ENSMZEG00005028158	-	72	33.074	Maylandia_zebra
ENSPKIG00000020805	rbm4.1	85	80.435	ENSMMOG00000020479	rbm4.1	100	63.869	Mola_mola
ENSPKIG00000020805	rbm4.1	86	69.286	ENSMMOG00000020484	-	88	69.286	Mola_mola
ENSPKIG00000020805	rbm4.1	85	79.710	ENSMALG00000020544	rbm4.1	100	61.593	Monopterus_albus
ENSPKIG00000020805	rbm4.1	85	71.739	ENSMALG00000020557	-	98	49.880	Monopterus_albus
ENSPKIG00000020805	rbm4.1	85	68.841	ENSNBRG00000017763	-	90	68.841	Neolamprologus_brichardi
ENSPKIG00000020805	rbm4.1	85	79.710	ENSNBRG00000017755	rbm4.1	100	64.953	Neolamprologus_brichardi
ENSPKIG00000020805	rbm4.1	85	79.710	ENSONIG00000015730	rbm4.1	100	64.953	Oreochromis_niloticus
ENSPKIG00000020805	rbm4.1	85	77.536	ENSORLG00000012496	rbm4.1	100	55.506	Oryzias_latipes
ENSPKIG00000020805	rbm4.1	85	77.536	ENSORLG00020012454	rbm4.1	100	55.506	Oryzias_latipes_hni
ENSPKIG00000020805	rbm4.1	85	77.536	ENSORLG00015013678	rbm4.1	100	55.506	Oryzias_latipes_hsok
ENSPKIG00000020805	rbm4.1	85	78.261	ENSOMEG00000001001	rbm4.1	100	55.955	Oryzias_melastigma
ENSPKIG00000020805	rbm4.1	93	79.710	ENSPMGG00000004331	rbm4.1	93	79.710	Periophthalmus_magnuspinnatus
ENSPKIG00000020805	rbm4.1	86	53.285	ENSPMAG00000003433	rbm4.2	84	53.631	Petromyzon_marinus
ENSPKIG00000020805	rbm4.1	85	80.435	ENSPFOG00000012675	rbm4.1	100	59.302	Poecilia_formosa
ENSPKIG00000020805	rbm4.1	85	69.565	ENSPFOG00000012685	-	87	67.204	Poecilia_formosa
ENSPKIG00000020805	rbm4.1	85	68.841	ENSPLAG00000018569	-	88	68.841	Poecilia_latipinna
ENSPKIG00000020805	rbm4.1	85	80.435	ENSPLAG00000018572	rbm4.1	100	59.302	Poecilia_latipinna
ENSPKIG00000020805	rbm4.1	85	80.435	ENSPMEG00000006290	rbm4.1	100	59.302	Poecilia_mexicana
ENSPKIG00000020805	rbm4.1	85	68.841	ENSPMEG00000006278	-	88	68.841	Poecilia_mexicana
ENSPKIG00000020805	rbm4.1	99	62.069	ENSPREG00000003764	-	93	65.263	Poecilia_reticulata
ENSPKIG00000020805	rbm4.1	85	80.435	ENSPREG00000003724	rbm4.1	100	59.302	Poecilia_reticulata
ENSPKIG00000020805	rbm4.1	85	69.565	ENSPNYG00000004649	-	90	69.565	Pundamilia_nyererei
ENSPKIG00000020805	rbm4.1	85	79.710	ENSPNYG00000004662	rbm4.1	100	64.953	Pundamilia_nyererei
ENSPKIG00000020805	rbm4.1	87	85.507	ENSPNAG00000002539	rbm4.1	100	68.852	Pygocentrus_nattereri
ENSPKIG00000020805	rbm4.1	87	71.739	ENSPNAG00000013057	rbm4.2	100	51.732	Pygocentrus_nattereri
ENSPKIG00000020805	rbm4.1	87	52.448	ENSSFOG00015018567	zgc:77262	95	52.448	Scleropages_formosus
ENSPKIG00000020805	rbm4.1	100	91.253	ENSSFOG00015021996	sf1	100	91.253	Scleropages_formosus
ENSPKIG00000020805	rbm4.1	85	67.391	ENSSMAG00000007575	-	99	62.987	Scophthalmus_maximus
ENSPKIG00000020805	rbm4.1	85	79.710	ENSSMAG00000007571	rbm4.1	100	61.593	Scophthalmus_maximus
ENSPKIG00000020805	rbm4.1	85	70.290	ENSSDUG00000003936	-	99	49.315	Seriola_dumerili
ENSPKIG00000020805	rbm4.1	85	78.986	ENSSDUG00000003925	rbm4.1	100	64.252	Seriola_dumerili
ENSPKIG00000020805	rbm4.1	85	78.986	ENSSLDG00000013147	rbm4.1	100	64.252	Seriola_lalandi_dorsalis
ENSPKIG00000020805	rbm4.1	85	70.290	ENSSLDG00000013157	-	99	48.630	Seriola_lalandi_dorsalis
ENSPKIG00000020805	rbm4.1	85	65.942	ENSSPAG00000019046	-	99	45.863	Stegastes_partitus
ENSPKIG00000020805	rbm4.1	85	79.710	ENSSPAG00000019053	rbm4.1	100	64.336	Stegastes_partitus
ENSPKIG00000020805	rbm4.1	85	78.261	ENSTRUG00000013334	rbm4.1	100	60.656	Takifugu_rubripes
ENSPKIG00000020805	rbm4.1	85	79.710	ENSTNIG00000004821	rbm4.1	94	81.183	Tetraodon_nigroviridis
ENSPKIG00000020805	rbm4.1	85	67.391	ENSTNIG00000000316	-	98	45.667	Tetraodon_nigroviridis
ENSPKIG00000020805	rbm4.1	99	67.391	ENSXETG00000026649	rbm4b	81	70.391	Xenopus_tropicalis
ENSPKIG00000020805	rbm4.1	85	68.841	ENSXCOG00000003730	-	87	68.571	Xiphophorus_couchianus
ENSPKIG00000020805	rbm4.1	85	80.435	ENSXCOG00000003731	rbm4.1	100	59.302	Xiphophorus_couchianus
ENSPKIG00000020805	rbm4.1	85	80.435	ENSXMAG00000008069	rbm4.1	100	59.302	Xiphophorus_maculatus
ENSPKIG00000020805	rbm4.1	94	69.325	ENSXMAG00000008059	-	87	66.667	Xiphophorus_maculatus