EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000020833 (Gene tree)
Gene ID: 111849991
Gene Symbol: mtrex
Alias: -
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 27853 bases
Position: chrPGUA01000003.1:3377057-3404909
Accession: 111849991
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000003394	rRNA_proc-arch	PF13234.6	7.3e-88	1	1
ENSPKIP00000003247	rRNA_proc-arch	PF13234.6	7.6e-88	1	1
ENSPKIP00000003297	rRNA_proc-arch	PF13234.6	7.7e-88	1	1
ENSPKIP00000003330	rRNA_proc-arch	PF13234.6	2.8e-75	1	2
ENSPKIP00000003330	rRNA_proc-arch	PF13234.6	2.8e-75	2	2
ENSPKIP00000003330	DEAD	PF00270.29	4.3e-17	1	1
ENSPKIP00000003394	DEAD	PF00270.29	4.3e-17	1	1
ENSPKIP00000003247	DEAD	PF00270.29	4.6e-17	1	1
ENSPKIP00000003297	DEAD	PF00270.29	4.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000027206	-	3118	XM_023823381	ENSPKIP00000003247	1034 (aa)	XP_023679149	UPI000CD602B2
ENSPKIT00000027256	-	3136	-	ENSPKIP00000003297	1040 (aa)	-	-
ENSPKIT00000027355	-	2964	-	ENSPKIP00000003394	987 (aa)	-	-
ENSPKIT00000027291	-	2976	-	ENSPKIP00000003330	991 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000020833's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000020833's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000020833	mtrex	94	36.089	ENSPKIG00000011876	skiv2l	82	36.694

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000020833	mtrex	98	88.671	ENSG00000039123	MTREX	100	87.011	Homo_sapiens
ENSPKIG00000020833	mtrex	100	86.622	ENSAPOG00000007814	mtrex	100	86.622	Acanthochromis_polyacanthus
ENSPKIG00000020833	mtrex	100	86.832	ENSAMEG00000013856	MTREX	100	86.832	Ailuropoda_melanoleuca
ENSPKIG00000020833	mtrex	100	85.271	ENSACIG00000015117	mtrex	100	85.271	Amphilophus_citrinellus
ENSPKIG00000020833	mtrex	100	86.718	ENSAOCG00000011884	mtrex	100	86.718	Amphiprion_ocellaris
ENSPKIG00000020833	mtrex	100	86.718	ENSAPEG00000019384	mtrex	100	86.718	Amphiprion_percula
ENSPKIG00000020833	mtrex	100	86.994	ENSATEG00000015117	mtrex	100	86.994	Anabas_testudineus
ENSPKIG00000020833	mtrex	97	88.100	ENSAPLG00000009694	MTREX	98	88.627	Anas_platyrhynchos
ENSPKIG00000020833	mtrex	100	87.261	ENSACAG00000015200	MTREX	96	87.261	Anolis_carolinensis
ENSPKIG00000020833	mtrex	99	87.894	ENSANAG00000023095	MTREX	100	87.011	Aotus_nancymaae
ENSPKIG00000020833	mtrex	100	85.413	ENSACLG00000001921	mtrex	100	85.509	Astatotilapia_calliptera
ENSPKIG00000020833	mtrex	95	88.438	ENSAMXG00000018751	mtrex	99	88.438	Astyanax_mexicanus
ENSPKIG00000020833	mtrex	99	87.792	ENSBTAG00000010518	MTREX	100	86.699	Bos_taurus
ENSPKIG00000020833	mtrex	95	54.198	WBGene00012342	mtr-4	91	54.565	Caenorhabditis_elegans
ENSPKIG00000020833	mtrex	99	87.894	ENSCJAG00000001773	MTREX	100	86.325	Callithrix_jacchus
ENSPKIG00000020833	mtrex	99	87.894	ENSCAFG00000006818	MTREX	100	86.819	Canis_familiaris
ENSPKIG00000020833	mtrex	99	87.894	ENSCAFG00020024352	MTREX	100	86.819	Canis_lupus_dingo
ENSPKIG00000020833	mtrex	99	87.894	ENSCHIG00000024413	MTREX	100	86.724	Capra_hircus
ENSPKIG00000020833	mtrex	94	88.510	ENSTSYG00000007389	MTREX	100	88.510	Carlito_syrichta
ENSPKIG00000020833	mtrex	99	64.802	ENSCAPG00000008696	MTREX	100	66.565	Cavia_aperea
ENSPKIG00000020833	mtrex	99	87.792	ENSCPOG00000009797	MTREX	100	86.819	Cavia_porcellus
ENSPKIG00000020833	mtrex	99	87.894	ENSCCAG00000014177	MTREX	100	87.011	Cebus_capucinus
ENSPKIG00000020833	mtrex	98	88.774	ENSCATG00000042153	MTREX	100	87.011	Cercocebus_atys
ENSPKIG00000020833	mtrex	100	86.724	ENSCLAG00000006622	MTREX	100	86.819	Chinchilla_lanigera
ENSPKIG00000020833	mtrex	100	82.762	ENSCSAG00000016445	MTREX	100	83.048	Chlorocebus_sabaeus
ENSPKIG00000020833	mtrex	69	97.222	ENSCHOG00000010936	-	70	97.222	Choloepus_hoffmanni
ENSPKIG00000020833	mtrex	100	87.332	ENSCPBG00000026551	MTREX	94	87.524	Chrysemys_picta_bellii
ENSPKIG00000020833	mtrex	99	67.726	ENSCING00000003239	-	99	67.726	Ciona_intestinalis
ENSPKIG00000020833	mtrex	97	69.263	ENSCSAVG00000009304	-	100	70.708	Ciona_savignyi
ENSPKIG00000020833	mtrex	100	86.915	ENSCANG00000035770	MTREX	100	86.915	Colobus_angolensis_palliatus
ENSPKIG00000020833	mtrex	100	86.616	ENSCGRG00001024680	Mtrex	100	86.616	Cricetulus_griseus_chok1gshd
ENSPKIG00000020833	mtrex	100	86.616	ENSCGRG00000000307	Mtrex	100	86.616	Cricetulus_griseus_crigri
ENSPKIG00000020833	mtrex	100	85.618	ENSCSEG00000018621	mtrex	98	85.618	Cynoglossus_semilaevis
ENSPKIG00000020833	mtrex	100	85.563	ENSCVAG00000004556	mtrex	100	85.852	Cyprinodon_variegatus
ENSPKIG00000020833	mtrex	100	88.792	ENSDARG00000013457	mtrex	100	88.792	Danio_rerio
ENSPKIG00000020833	mtrex	100	86.108	ENSDNOG00000015375	MTREX	100	86.108	Dasypus_novemcinctus
ENSPKIG00000020833	mtrex	100	86.724	ENSDORG00000006782	Mtrex	100	86.819	Dipodomys_ordii
ENSPKIG00000020833	mtrex	98	64.845	FBgn0001986	Mtr4	98	62.476	Drosophila_melanogaster
ENSPKIG00000020833	mtrex	90	71.272	ENSETEG00000000727	MTREX	90	71.272	Echinops_telfairi
ENSPKIG00000020833	mtrex	99	74.566	ENSEBUG00000012869	mtrex	99	74.566	Eptatretus_burgeri
ENSPKIG00000020833	mtrex	99	87.691	ENSEASG00005013270	MTREX	100	86.628	Equus_asinus_asinus
ENSPKIG00000020833	mtrex	99	87.792	ENSECAG00000023723	MTREX	98	92.000	Equus_caballus
ENSPKIG00000020833	mtrex	97	79.855	ENSEEUG00000000527	MTREX	100	79.049	Erinaceus_europaeus
ENSPKIG00000020833	mtrex	100	88.473	ENSELUG00000004898	mtrex	100	92.437	Esox_lucius
ENSPKIG00000020833	mtrex	99	87.894	ENSFCAG00000010575	MTREX	100	86.819	Felis_catus
ENSPKIG00000020833	mtrex	100	86.044	ENSFALG00000010850	MTREX	100	86.141	Ficedula_albicollis
ENSPKIG00000020833	mtrex	100	86.699	ENSFDAG00000011199	MTREX	100	86.699	Fukomys_damarensis
ENSPKIG00000020833	mtrex	100	85.948	ENSFHEG00000023014	mtrex	100	84.957	Fundulus_heteroclitus
ENSPKIG00000020833	mtrex	100	82.239	ENSGMOG00000014702	mtrex	100	82.625	Gadus_morhua
ENSPKIG00000020833	mtrex	100	86.513	ENSGALG00000014709	MTREX	86	86.513	Gallus_gallus
ENSPKIG00000020833	mtrex	100	86.768	ENSGAFG00000012425	mtrex	100	86.970	Gambusia_affinis
ENSPKIG00000020833	mtrex	100	81.581	ENSGACG00000016260	mtrex	97	86.037	Gasterosteus_aculeatus
ENSPKIG00000020833	mtrex	100	87.428	ENSGAGG00000020036	MTREX	100	87.428	Gopherus_agassizii
ENSPKIG00000020833	mtrex	98	88.774	ENSGGOG00000001867	MTREX	100	87.106	Gorilla_gorilla
ENSPKIG00000020833	mtrex	100	85.413	ENSHBUG00000006229	mtrex	100	85.509	Haplochromis_burtoni
ENSPKIG00000020833	mtrex	100	86.890	ENSHGLG00000019445	SKIV2L2	100	86.699	Heterocephalus_glaber_female
ENSPKIG00000020833	mtrex	100	86.890	ENSHGLG00100011833	SKIV2L2	100	86.699	Heterocephalus_glaber_male
ENSPKIG00000020833	mtrex	96	85.947	ENSHCOG00000019995	mtrex	100	87.271	Hippocampus_comes
ENSPKIG00000020833	mtrex	100	89.007	ENSIPUG00000024348	skiv2l2	100	89.007	Ictalurus_punctatus
ENSPKIG00000020833	mtrex	98	88.671	ENSSTOG00000010802	MTREX	100	86.819	Ictidomys_tridecemlineatus
ENSPKIG00000020833	mtrex	100	81.766	ENSJJAG00000020975	Mtrex	100	81.766	Jaculus_jaculus
ENSPKIG00000020833	mtrex	100	85.645	ENSKMAG00000012642	mtrex	100	85.934	Kryptolebias_marmoratus
ENSPKIG00000020833	mtrex	100	86.622	ENSLBEG00000019367	mtrex	100	86.622	Labrus_bergylta
ENSPKIG00000020833	mtrex	100	87.548	ENSLACG00000009075	MTREX	100	87.548	Latimeria_chalumnae
ENSPKIG00000020833	mtrex	100	91.900	ENSLOCG00000010186	mtrex	100	91.900	Lepisosteus_oculatus
ENSPKIG00000020833	mtrex	99	84.814	ENSLAFG00000010497	MTREX	100	84.814	Loxodonta_africana
ENSPKIG00000020833	mtrex	98	88.774	ENSMFAG00000031610	MTREX	100	87.011	Macaca_fascicularis
ENSPKIG00000020833	mtrex	98	88.671	ENSMMUG00000010379	MTREX	100	86.654	Macaca_mulatta
ENSPKIG00000020833	mtrex	98	88.774	ENSMNEG00000032746	MTREX	100	87.011	Macaca_nemestrina
ENSPKIG00000020833	mtrex	98	88.774	ENSMLEG00000041051	MTREX	100	87.011	Mandrillus_leucophaeus
ENSPKIG00000020833	mtrex	100	87.048	ENSMAMG00000016753	mtrex	100	87.048	Mastacembelus_armatus
ENSPKIG00000020833	mtrex	100	85.413	ENSMZEG00005000414	mtrex	100	85.509	Maylandia_zebra
ENSPKIG00000020833	mtrex	96	63.883	ENSMGAG00000003980	MTREX	99	64.214	Meleagris_gallopavo
ENSPKIG00000020833	mtrex	100	86.711	ENSMAUG00000010727	Mtrex	100	86.902	Mesocricetus_auratus
ENSPKIG00000020833	mtrex	99	87.996	ENSMICG00000012779	MTREX	100	87.106	Microcebus_murinus
ENSPKIG00000020833	mtrex	100	86.533	ENSMOCG00000019886	Mtrex	100	86.533	Microtus_ochrogaster
ENSPKIG00000020833	mtrex	100	86.100	ENSMMOG00000002476	mtrex	100	86.100	Mola_mola
ENSPKIG00000020833	mtrex	100	86.802	ENSMODG00000019494	MTREX	100	86.802	Monodelphis_domestica
ENSPKIG00000020833	mtrex	100	81.231	ENSMALG00000002917	mtrex	99	83.878	Monopterus_albus
ENSPKIG00000020833	mtrex	100	86.699	MGP_CAROLIEiJ_G0018896	Mtrex	100	86.699	Mus_caroli
ENSPKIG00000020833	mtrex	100	86.699	ENSMUSG00000016018	Mtrex	100	86.699	Mus_musculus
ENSPKIG00000020833	mtrex	100	86.603	MGP_PahariEiJ_G0015967	Mtrex	100	86.603	Mus_pahari
ENSPKIG00000020833	mtrex	100	86.699	MGP_SPRETEiJ_G0019775	Mtrex	100	86.699	Mus_spretus
ENSPKIG00000020833	mtrex	99	87.894	ENSMPUG00000007619	MTREX	100	87.011	Mustela_putorius_furo
ENSPKIG00000020833	mtrex	100	86.260	ENSMLUG00000001152	MTREX	100	86.641	Myotis_lucifugus
ENSPKIG00000020833	mtrex	98	88.774	ENSNGAG00000011938	Mtrex	100	87.011	Nannospalax_galili
ENSPKIG00000020833	mtrex	100	85.605	ENSNBRG00000011293	mtrex	100	85.701	Neolamprologus_brichardi
ENSPKIG00000020833	mtrex	100	82.841	ENSNLEG00000001494	MTREX	100	83.222	Nomascus_leucogenys
ENSPKIG00000020833	mtrex	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSPKIG00000020833	mtrex	100	73.084	ENSOPRG00000008009	MTREX	100	73.372	Ochotona_princeps
ENSPKIG00000020833	mtrex	99	87.182	ENSODEG00000017234	MTREX	100	86.246	Octodon_degus
ENSPKIG00000020833	mtrex	100	85.742	ENSONIG00000007587	mtrex	100	85.838	Oreochromis_niloticus
ENSPKIG00000020833	mtrex	52	85.659	ENSOANG00000004885	-	99	85.659	Ornithorhynchus_anatinus
ENSPKIG00000020833	mtrex	100	86.986	ENSOCUG00000004463	MTREX	100	86.986	Oryctolagus_cuniculus
ENSPKIG00000020833	mtrex	100	85.632	ENSORLG00000005443	mtrex	100	85.632	Oryzias_latipes
ENSPKIG00000020833	mtrex	100	85.632	ENSORLG00020006329	mtrex	100	85.632	Oryzias_latipes_hni
ENSPKIG00000020833	mtrex	100	85.632	ENSORLG00015012924	mtrex	100	85.632	Oryzias_latipes_hsok
ENSPKIG00000020833	mtrex	100	85.399	ENSOMEG00000008825	mtrex	100	85.399	Oryzias_melastigma
ENSPKIG00000020833	mtrex	98	88.774	ENSOGAG00000002886	MTREX	100	86.819	Otolemur_garnettii
ENSPKIG00000020833	mtrex	99	87.627	ENSOARG00000007764	MTREX	100	86.476	Ovis_aries
ENSPKIG00000020833	mtrex	98	88.774	ENSPPAG00000039291	MTREX	100	87.106	Pan_paniscus
ENSPKIG00000020833	mtrex	99	87.894	ENSPPRG00000019701	MTREX	100	86.819	Panthera_pardus
ENSPKIG00000020833	mtrex	100	85.387	ENSPTIG00000009313	MTREX	100	85.387	Panthera_tigris_altaica
ENSPKIG00000020833	mtrex	98	88.774	ENSPTRG00000016878	MTREX	100	87.106	Pan_troglodytes
ENSPKIG00000020833	mtrex	98	88.671	ENSPANG00000009697	MTREX	100	86.915	Papio_anubis
ENSPKIG00000020833	mtrex	100	86.994	ENSPSIG00000012150	MTREX	100	87.572	Pelodiscus_sinensis
ENSPKIG00000020833	mtrex	100	84.310	ENSPMGG00000002582	mtrex	100	84.310	Periophthalmus_magnuspinnatus
ENSPKIG00000020833	mtrex	95	66.465	ENSPMAG00000009668	mtrex	100	66.465	Petromyzon_marinus
ENSPKIG00000020833	mtrex	96	89.496	ENSPCIG00000024730	MTREX	100	90.756	Phascolarctos_cinereus
ENSPKIG00000020833	mtrex	80	86.565	ENSPFOG00000003141	mtrex	100	88.340	Poecilia_formosa
ENSPKIG00000020833	mtrex	100	85.399	ENSPLAG00000021311	mtrex	100	85.591	Poecilia_latipinna
ENSPKIG00000020833	mtrex	98	86.425	ENSPMEG00000010597	mtrex	99	88.192	Poecilia_mexicana
ENSPKIG00000020833	mtrex	100	85.303	ENSPREG00000003089	mtrex	100	85.495	Poecilia_reticulata
ENSPKIG00000020833	mtrex	96	88.574	ENSPPYG00000015469	MTREX	98	86.893	Pongo_abelii
ENSPKIG00000020833	mtrex	94	77.209	ENSPCAG00000013120	MTREX	94	77.209	Procavia_capensis
ENSPKIG00000020833	mtrex	99	81.132	ENSPCOG00000018092	MTREX	100	81.132	Propithecus_coquereli
ENSPKIG00000020833	mtrex	99	87.792	ENSPVAG00000002445	MTREX	100	86.724	Pteropus_vampyrus
ENSPKIG00000020833	mtrex	100	85.317	ENSPNYG00000006164	mtrex	100	85.413	Pundamilia_nyererei
ENSPKIG00000020833	mtrex	100	90.164	ENSPNAG00000008794	mtrex	100	90.164	Pygocentrus_nattereri
ENSPKIG00000020833	mtrex	99	86.170	ENSRNOG00000010125	Mtrex	97	86.170	Rattus_norvegicus
ENSPKIG00000020833	mtrex	100	85.100	ENSRBIG00000034930	MTREX	100	85.482	Rhinopithecus_bieti
ENSPKIG00000020833	mtrex	98	88.774	ENSRROG00000039895	MTREX	100	87.106	Rhinopithecus_roxellana
ENSPKIG00000020833	mtrex	95	55.370	YJL050W	MTR4	99	51.937	Saccharomyces_cerevisiae
ENSPKIG00000020833	mtrex	99	87.894	ENSSBOG00000026693	MTREX	100	87.011	Saimiri_boliviensis_boliviensis
ENSPKIG00000020833	mtrex	98	88.568	ENSSHAG00000004600	MTREX	99	88.677	Sarcophilus_harrisii
ENSPKIG00000020833	mtrex	100	93.133	ENSSFOG00015014355	skiv2l2	100	93.133	Scleropages_formosus
ENSPKIG00000020833	mtrex	100	86.333	ENSSMAG00000007572	mtrex	100	86.333	Scophthalmus_maximus
ENSPKIG00000020833	mtrex	100	87.103	ENSSDUG00000023789	mtrex	100	87.103	Seriola_dumerili
ENSPKIG00000020833	mtrex	100	86.840	ENSSLDG00000006301	mtrex	100	86.840	Seriola_lalandi_dorsalis
ENSPKIG00000020833	mtrex	97	89.644	ENSSARG00000008387	MTREX	100	85.100	Sorex_araneus
ENSPKIG00000020833	mtrex	89	88.889	ENSSPUG00000007071	MTREX	96	88.889	Sphenodon_punctatus
ENSPKIG00000020833	mtrex	100	83.946	ENSSPAG00000011319	mtrex	100	84.043	Stegastes_partitus
ENSPKIG00000020833	mtrex	99	87.894	ENSSSCG00000016911	MTREX	100	86.819	Sus_scrofa
ENSPKIG00000020833	mtrex	100	85.192	ENSTGUG00000002480	MTREX	100	85.192	Taeniopygia_guttata
ENSPKIG00000020833	mtrex	100	85.742	ENSTRUG00000014571	mtrex	100	85.742	Takifugu_rubripes
ENSPKIG00000020833	mtrex	100	71.920	ENSTBEG00000007769	MTREX	100	72.206	Tupaia_belangeri
ENSPKIG00000020833	mtrex	100	86.603	ENSTTRG00000008678	MTREX	100	86.603	Tursiops_truncatus
ENSPKIG00000020833	mtrex	100	87.106	ENSUAMG00000023061	MTREX	100	87.106	Ursus_americanus
ENSPKIG00000020833	mtrex	100	86.500	ENSUMAG00000009373	MTREX	99	91.429	Ursus_maritimus
ENSPKIG00000020833	mtrex	100	76.886	ENSVPAG00000011174	MTREX	100	76.886	Vicugna_pacos
ENSPKIG00000020833	mtrex	99	87.996	ENSVVUG00000021337	MTREX	100	86.915	Vulpes_vulpes
ENSPKIG00000020833	mtrex	100	87.838	ENSXETG00000032798	MTREX	100	87.838	Xenopus_tropicalis
ENSPKIG00000020833	mtrex	100	85.960	ENSXMAG00000004799	mtrex	100	86.162	Xiphophorus_maculatus