EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000021022 (Gene tree)
Gene ID: 111854174
Gene Symbol: rcl1
Alias: -
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 10290 bases
Position: chrPGUA01000270.1:289643-299932
Accession: 111854174
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000003586	RTC	PF01137.21	4.6e-57	1	1
ENSPKIP00000003586	RTC_insert	PF05189.13	3.3e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000027547	-	1517	-	ENSPKIP00000003586	372 (aa)	XP_023687658	UPI000CD5D9E0

Gene Model

Click here to download ENSPKIG00000021022's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000021022's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000021022	rcl1	100	78.075	ENSG00000120158	RCL1	96	87.786	Homo_sapiens
ENSPKIG00000021022	rcl1	100	80.645	ENSAPOG00000015666	rcl1	100	80.645	Acanthochromis_polyacanthus
ENSPKIG00000021022	rcl1	100	78.877	ENSAMEG00000002631	RCL1	100	78.877	Ailuropoda_melanoleuca
ENSPKIG00000021022	rcl1	100	80.914	ENSACIG00000021195	rcl1	100	80.914	Amphilophus_citrinellus
ENSPKIG00000021022	rcl1	100	79.301	ENSAOCG00000002223	rcl1	100	79.301	Amphiprion_ocellaris
ENSPKIG00000021022	rcl1	100	79.301	ENSAPEG00000006905	rcl1	100	79.301	Amphiprion_percula
ENSPKIG00000021022	rcl1	100	79.570	ENSATEG00000020026	rcl1	100	79.570	Anabas_testudineus
ENSPKIG00000021022	rcl1	88	76.596	ENSAPLG00000006031	RCL1	100	76.596	Anas_platyrhynchos
ENSPKIG00000021022	rcl1	100	73.529	ENSACAG00000003640	RCL1	100	73.529	Anolis_carolinensis
ENSPKIG00000021022	rcl1	100	77.807	ENSANAG00000037372	RCL1	100	77.807	Aotus_nancymaae
ENSPKIG00000021022	rcl1	100	81.452	ENSACLG00000021724	rcl1	100	81.452	Astatotilapia_calliptera
ENSPKIG00000021022	rcl1	99	80.978	ENSAMXG00000033394	rcl1	99	80.978	Astyanax_mexicanus
ENSPKIG00000021022	rcl1	99	46.296	WBGene00022852	ZK1127.5	99	46.296	Caenorhabditis_elegans
ENSPKIG00000021022	rcl1	100	78.075	ENSCJAG00000011202	RCL1	100	78.075	Callithrix_jacchus
ENSPKIG00000021022	rcl1	100	79.679	ENSCAFG00000002091	RCL1	100	79.679	Canis_familiaris
ENSPKIG00000021022	rcl1	100	79.679	ENSCAFG00020000638	RCL1	78	79.679	Canis_lupus_dingo
ENSPKIG00000021022	rcl1	100	78.342	ENSCHIG00000012407	RCL1	100	78.342	Capra_hircus
ENSPKIG00000021022	rcl1	88	80.488	ENSTSYG00000009592	RCL1	97	82.967	Carlito_syrichta
ENSPKIG00000021022	rcl1	69	64.740	ENSCAPG00000013575	RCL1	100	64.740	Cavia_aperea
ENSPKIG00000021022	rcl1	100	78.342	ENSCPOG00000015354	RCL1	100	78.342	Cavia_porcellus
ENSPKIG00000021022	rcl1	100	78.075	ENSCCAG00000033505	RCL1	97	82.514	Cebus_capucinus
ENSPKIG00000021022	rcl1	100	78.075	ENSCATG00000034721	RCL1	97	82.418	Cercocebus_atys
ENSPKIG00000021022	rcl1	100	77.540	ENSCLAG00000007445	RCL1	100	77.540	Chinchilla_lanigera
ENSPKIG00000021022	rcl1	100	78.075	ENSCSAG00000008811	RCL1	100	78.075	Chlorocebus_sabaeus
ENSPKIG00000021022	rcl1	86	69.350	ENSCHOG00000007216	RCL1	100	69.350	Choloepus_hoffmanni
ENSPKIG00000021022	rcl1	100	77.807	ENSCPBG00000025481	RCL1	94	79.697	Chrysemys_picta_bellii
ENSPKIG00000021022	rcl1	100	59.200	ENSCING00000019565	-	99	59.200	Ciona_intestinalis
ENSPKIG00000021022	rcl1	100	78.075	ENSCANG00000027099	RCL1	100	78.075	Colobus_angolensis_palliatus
ENSPKIG00000021022	rcl1	100	78.075	ENSCGRG00001013748	Rcl1	100	78.075	Cricetulus_griseus_chok1gshd
ENSPKIG00000021022	rcl1	88	79.939	ENSCGRG00000005843	Rcl1	99	79.939	Cricetulus_griseus_crigri
ENSPKIG00000021022	rcl1	100	79.839	ENSCSEG00000000712	rcl1	98	79.839	Cynoglossus_semilaevis
ENSPKIG00000021022	rcl1	100	81.720	ENSCVAG00000011536	rcl1	100	81.720	Cyprinodon_variegatus
ENSPKIG00000021022	rcl1	99	79.292	ENSDARG00000038312	rcl1	100	79.292	Danio_rerio
ENSPKIG00000021022	rcl1	72	80.075	ENSDNOG00000019911	RCL1	100	83.796	Dasypus_novemcinctus
ENSPKIG00000021022	rcl1	99	78.108	ENSDORG00000015645	Rcl1	99	78.108	Dipodomys_ordii
ENSPKIG00000021022	rcl1	99	53.704	FBgn0020909	Rtc1	98	53.704	Drosophila_melanogaster
ENSPKIG00000021022	rcl1	88	55.183	ENSETEG00000014087	-	100	55.183	Echinops_telfairi
ENSPKIG00000021022	rcl1	100	55.764	ENSEBUG00000016621	-	99	55.764	Eptatretus_burgeri
ENSPKIG00000021022	rcl1	100	78.877	ENSEASG00005010653	RCL1	100	78.877	Equus_asinus_asinus
ENSPKIG00000021022	rcl1	100	78.877	ENSECAG00000015973	RCL1	100	78.877	Equus_caballus
ENSPKIG00000021022	rcl1	99	67.838	ENSEEUG00000009801	RCL1	99	67.838	Erinaceus_europaeus
ENSPKIG00000021022	rcl1	100	80.108	ENSELUG00000007353	rcl1	100	80.108	Esox_lucius
ENSPKIG00000021022	rcl1	99	77.838	ENSFCAG00000014557	RCL1	99	77.838	Felis_catus
ENSPKIG00000021022	rcl1	100	70.161	ENSFALG00000010553	RCL1	98	70.161	Ficedula_albicollis
ENSPKIG00000021022	rcl1	88	78.049	ENSFDAG00000004209	RCL1	100	78.049	Fukomys_damarensis
ENSPKIG00000021022	rcl1	100	81.183	ENSFHEG00000011228	rcl1	100	81.183	Fundulus_heteroclitus
ENSPKIG00000021022	rcl1	100	79.032	ENSGMOG00000004677	rcl1	100	79.032	Gadus_morhua
ENSPKIG00000021022	rcl1	99	73.315	ENSGALG00000015024	RCL1	99	73.315	Gallus_gallus
ENSPKIG00000021022	rcl1	100	80.645	ENSGAFG00000007257	rcl1	100	80.645	Gambusia_affinis
ENSPKIG00000021022	rcl1	100	80.645	ENSGACG00000017474	rcl1	100	80.645	Gasterosteus_aculeatus
ENSPKIG00000021022	rcl1	100	77.005	ENSGAGG00000003689	RCL1	100	77.005	Gopherus_agassizii
ENSPKIG00000021022	rcl1	100	77.540	ENSGGOG00000015041	RCL1	97	81.868	Gorilla_gorilla
ENSPKIG00000021022	rcl1	100	81.720	ENSHBUG00000001393	rcl1	100	81.720	Haplochromis_burtoni
ENSPKIG00000021022	rcl1	100	64.973	ENSHGLG00000005368	-	100	64.973	Heterocephalus_glaber_female
ENSPKIG00000021022	rcl1	100	77.273	ENSHGLG00000016452	RCL1	100	77.273	Heterocephalus_glaber_female
ENSPKIG00000021022	rcl1	100	72.727	ENSHGLG00100008718	-	100	72.727	Heterocephalus_glaber_male
ENSPKIG00000021022	rcl1	100	66.043	ENSHGLG00100018010	-	100	66.043	Heterocephalus_glaber_male
ENSPKIG00000021022	rcl1	100	79.839	ENSHCOG00000020170	rcl1	100	79.839	Hippocampus_comes
ENSPKIG00000021022	rcl1	100	81.452	ENSIPUG00000018054	RCL1	100	81.452	Ictalurus_punctatus
ENSPKIG00000021022	rcl1	100	77.540	ENSSTOG00000000023	RCL1	100	77.540	Ictidomys_tridecemlineatus
ENSPKIG00000021022	rcl1	54	60.396	ENSJJAG00000000764	-	98	60.396	Jaculus_jaculus
ENSPKIG00000021022	rcl1	99	68.919	ENSJJAG00000015632	-	99	68.919	Jaculus_jaculus
ENSPKIG00000021022	rcl1	99	78.649	ENSJJAG00000022803	-	99	78.649	Jaculus_jaculus
ENSPKIG00000021022	rcl1	100	79.839	ENSKMAG00000011946	rcl1	100	79.839	Kryptolebias_marmoratus
ENSPKIG00000021022	rcl1	100	77.419	ENSLBEG00000003957	rcl1	100	77.419	Labrus_bergylta
ENSPKIG00000021022	rcl1	92	74.561	ENSLACG00000004594	RCL1	100	78.571	Latimeria_chalumnae
ENSPKIG00000021022	rcl1	100	83.871	ENSLOCG00000010148	rcl1	98	83.871	Lepisosteus_oculatus
ENSPKIG00000021022	rcl1	99	77.838	ENSLAFG00000017495	RCL1	99	77.838	Loxodonta_africana
ENSPKIG00000021022	rcl1	100	78.075	ENSMFAG00000037906	RCL1	100	78.075	Macaca_fascicularis
ENSPKIG00000021022	rcl1	100	78.075	ENSMNEG00000012288	RCL1	97	82.418	Macaca_nemestrina
ENSPKIG00000021022	rcl1	100	78.075	ENSMLEG00000043088	RCL1	100	78.075	Mandrillus_leucophaeus
ENSPKIG00000021022	rcl1	100	81.452	ENSMAMG00000008311	rcl1	100	81.452	Mastacembelus_armatus
ENSPKIG00000021022	rcl1	100	81.452	ENSMZEG00005017292	rcl1	100	81.452	Maylandia_zebra
ENSPKIG00000021022	rcl1	58	75.455	ENSMGAG00000002245	RCL1	100	75.455	Meleagris_gallopavo
ENSPKIG00000021022	rcl1	58	81.944	ENSMAUG00000008922	Rcl1	100	81.944	Mesocricetus_auratus
ENSPKIG00000021022	rcl1	100	78.342	ENSMICG00000015562	RCL1	100	78.342	Microcebus_murinus
ENSPKIG00000021022	rcl1	100	78.075	ENSMOCG00000012145	Rcl1	100	78.075	Microtus_ochrogaster
ENSPKIG00000021022	rcl1	100	78.016	ENSMMOG00000021264	rcl1	100	78.016	Mola_mola
ENSPKIG00000021022	rcl1	95	78.090	ENSMODG00000015377	RCL1	94	78.090	Monodelphis_domestica
ENSPKIG00000021022	rcl1	100	80.645	ENSMALG00000018618	rcl1	100	80.645	Monopterus_albus
ENSPKIG00000021022	rcl1	100	78.075	MGP_CAROLIEiJ_G0022853	Rcl1	100	78.075	Mus_caroli
ENSPKIG00000021022	rcl1	100	77.540	ENSMUSG00000024785	Rcl1	100	77.540	Mus_musculus
ENSPKIG00000021022	rcl1	100	78.342	MGP_PahariEiJ_G0014346	Rcl1	100	81.871	Mus_pahari
ENSPKIG00000021022	rcl1	100	77.540	MGP_SPRETEiJ_G0023771	Rcl1	100	81.287	Mus_spretus
ENSPKIG00000021022	rcl1	100	78.610	ENSMPUG00000004998	RCL1	100	78.610	Mustela_putorius_furo
ENSPKIG00000021022	rcl1	100	78.342	ENSMLUG00000009654	RCL1	100	78.342	Myotis_lucifugus
ENSPKIG00000021022	rcl1	100	78.075	ENSNGAG00000015327	Rcl1	100	78.075	Nannospalax_galili
ENSPKIG00000021022	rcl1	92	79.009	ENSNBRG00000019854	rcl1	99	75.482	Neolamprologus_brichardi
ENSPKIG00000021022	rcl1	100	75.401	ENSNLEG00000008891	RCL1	100	75.401	Nomascus_leucogenys
ENSPKIG00000021022	rcl1	100	71.658	ENSMEUG00000007653	RCL1	100	71.658	Notamacropus_eugenii
ENSPKIG00000021022	rcl1	100	76.738	ENSOPRG00000010965	RCL1	100	76.738	Ochotona_princeps
ENSPKIG00000021022	rcl1	88	65.957	ENSODEG00000004151	RCL1	96	65.957	Octodon_degus
ENSPKIG00000021022	rcl1	100	82.796	ENSONIG00000003871	rcl1	100	82.796	Oreochromis_niloticus
ENSPKIG00000021022	rcl1	66	76.707	ENSOANG00000013193	-	98	76.707	Ornithorhynchus_anatinus
ENSPKIG00000021022	rcl1	100	78.075	ENSOCUG00000008161	RCL1	100	78.075	Oryctolagus_cuniculus
ENSPKIG00000021022	rcl1	100	77.419	ENSORLG00000010443	rcl1	100	77.419	Oryzias_latipes
ENSPKIG00000021022	rcl1	100	77.688	ENSORLG00020012211	rcl1	100	77.688	Oryzias_latipes_hni
ENSPKIG00000021022	rcl1	100	77.151	ENSORLG00015001122	rcl1	100	77.151	Oryzias_latipes_hsok
ENSPKIG00000021022	rcl1	100	79.570	ENSOMEG00000022976	rcl1	88	79.570	Oryzias_melastigma
ENSPKIG00000021022	rcl1	99	77.838	ENSOGAG00000007480	RCL1	99	77.838	Otolemur_garnettii
ENSPKIG00000021022	rcl1	100	78.342	ENSOARG00000013463	RCL1	100	78.342	Ovis_aries
ENSPKIG00000021022	rcl1	100	77.807	ENSPPAG00000037958	RCL1	100	77.807	Pan_paniscus
ENSPKIG00000021022	rcl1	99	77.568	ENSPPRG00000022645	RCL1	96	82.123	Panthera_pardus
ENSPKIG00000021022	rcl1	88	79.205	ENSPTIG00000019031	RCL1	100	81.481	Panthera_tigris_altaica
ENSPKIG00000021022	rcl1	100	78.075	ENSPTRG00000020743	RCL1	97	82.418	Pan_troglodytes
ENSPKIG00000021022	rcl1	100	78.075	ENSPANG00000025151	RCL1	100	78.075	Papio_anubis
ENSPKIG00000021022	rcl1	88	79.027	ENSPSIG00000012302	RCL1	100	79.027	Pelodiscus_sinensis
ENSPKIG00000021022	rcl1	100	79.839	ENSPMGG00000024007	rcl1	100	79.839	Periophthalmus_magnuspinnatus
ENSPKIG00000021022	rcl1	100	78.342	ENSPEMG00000023275	Rcl1	100	78.342	Peromyscus_maniculatus_bairdii
ENSPKIG00000021022	rcl1	100	77.540	ENSPCIG00000000188	RCL1	100	77.540	Phascolarctos_cinereus
ENSPKIG00000021022	rcl1	100	81.452	ENSPFOG00000019682	rcl1	99	81.452	Poecilia_formosa
ENSPKIG00000021022	rcl1	100	81.183	ENSPLAG00000022354	rcl1	100	81.183	Poecilia_latipinna
ENSPKIG00000021022	rcl1	100	81.452	ENSPMEG00000008131	rcl1	100	81.452	Poecilia_mexicana
ENSPKIG00000021022	rcl1	100	80.645	ENSPREG00000008032	rcl1	100	80.645	Poecilia_reticulata
ENSPKIG00000021022	rcl1	100	77.807	ENSPPYG00000019244	RCL1	100	77.807	Pongo_abelii
ENSPKIG00000021022	rcl1	99	72.162	ENSPCAG00000001440	RCL1	99	72.162	Procavia_capensis
ENSPKIG00000021022	rcl1	100	78.610	ENSPCOG00000009611	RCL1	97	82.967	Propithecus_coquereli
ENSPKIG00000021022	rcl1	100	78.877	ENSPVAG00000015752	RCL1	100	78.877	Pteropus_vampyrus
ENSPKIG00000021022	rcl1	100	81.452	ENSPNYG00000012910	rcl1	100	81.452	Pundamilia_nyererei
ENSPKIG00000021022	rcl1	99	79.891	ENSPNAG00000028307	rcl1	91	79.891	Pygocentrus_nattereri
ENSPKIG00000021022	rcl1	100	77.540	ENSRNOG00000015491	Rcl1	100	77.540	Rattus_norvegicus
ENSPKIG00000021022	rcl1	100	77.807	ENSRBIG00000035818	RCL1	100	77.807	Rhinopithecus_bieti
ENSPKIG00000021022	rcl1	100	78.075	ENSRROG00000029781	RCL1	97	82.418	Rhinopithecus_roxellana
ENSPKIG00000021022	rcl1	98	37.634	YOL010W	-	97	37.634	Saccharomyces_cerevisiae
ENSPKIG00000021022	rcl1	100	78.075	ENSSBOG00000026369	RCL1	97	82.514	Saimiri_boliviensis_boliviensis
ENSPKIG00000021022	rcl1	89	78.550	ENSSHAG00000014086	RCL1	100	78.550	Sarcophilus_harrisii
ENSPKIG00000021022	rcl1	100	87.634	ENSSFOG00015023020	rcl1	100	87.634	Scleropages_formosus
ENSPKIG00000021022	rcl1	100	81.452	ENSSMAG00000019751	rcl1	86	81.452	Scophthalmus_maximus
ENSPKIG00000021022	rcl1	100	81.183	ENSSDUG00000006349	rcl1	100	81.183	Seriola_dumerili
ENSPKIG00000021022	rcl1	100	81.452	ENSSLDG00000022076	rcl1	100	81.452	Seriola_lalandi_dorsalis
ENSPKIG00000021022	rcl1	100	78.075	ENSSARG00000009260	RCL1	100	78.075	Sorex_araneus
ENSPKIG00000021022	rcl1	99	76.757	ENSSPUG00000016330	RCL1	99	76.757	Sphenodon_punctatus
ENSPKIG00000021022	rcl1	100	80.645	ENSSPAG00000018038	rcl1	100	80.645	Stegastes_partitus
ENSPKIG00000021022	rcl1	100	78.610	ENSSSCG00000005217	RCL1	83	78.610	Sus_scrofa
ENSPKIG00000021022	rcl1	99	73.118	ENSTGUG00000005138	RCL1	99	73.118	Taeniopygia_guttata
ENSPKIG00000021022	rcl1	100	78.495	ENSTRUG00000010493	rcl1	100	78.495	Takifugu_rubripes
ENSPKIG00000021022	rcl1	100	76.344	ENSTNIG00000013214	rcl1	99	76.344	Tetraodon_nigroviridis
ENSPKIG00000021022	rcl1	100	73.262	ENSTBEG00000016339	RCL1	100	73.262	Tupaia_belangeri
ENSPKIG00000021022	rcl1	100	78.610	ENSTTRG00000016525	RCL1	100	78.610	Tursiops_truncatus
ENSPKIG00000021022	rcl1	100	78.877	ENSUAMG00000005598	RCL1	100	80.556	Ursus_americanus
ENSPKIG00000021022	rcl1	88	80.183	ENSUMAG00000017890	RCL1	97	80.183	Ursus_maritimus
ENSPKIG00000021022	rcl1	88	81.707	ENSVPAG00000009188	RCL1	100	81.707	Vicugna_pacos
ENSPKIG00000021022	rcl1	88	82.067	ENSVVUG00000007304	RCL1	89	82.067	Vulpes_vulpes
ENSPKIG00000021022	rcl1	100	70.667	ENSXETG00000000592	rcl1	100	70.667	Xenopus_tropicalis
ENSPKIG00000021022	rcl1	100	81.183	ENSXCOG00000004922	rcl1	100	81.183	Xiphophorus_couchianus
ENSPKIG00000021022	rcl1	100	81.183	ENSXMAG00000022366	RCL1	100	81.183	Xiphophorus_maculatus