EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000021368 (Gene tree)
Gene ID: 111855474
Gene Symbol: cnot6b
Alias: -
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 13543 bases
Position: chrPGUA01000295.1:415495-429037
Accession: 111855474
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000004146	Exo_endo_phos	PF03372.23	1.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000028124	-	5517	-	ENSPKIP00000004146	558 (aa)	XP_023690274	UPI000CD6449D

Gene Model

Click here to download ENSPKIG00000021368's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000021368's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000021368	cnot6b	100	89.427	ENSPKIG00000019150	adamts2	89	89.427
ENSPKIG00000021368	cnot6b	100	75.179	ENSPKIG00000002892	cnot6l	100	75.179

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000021368	cnot6b	100	86.559	ENSG00000113300	CNOT6	100	94.737	Homo_sapiens
ENSPKIG00000021368	cnot6b	100	91.413	ENSAPOG00000009994	cnot6b	100	91.413	Acanthochromis_polyacanthus
ENSPKIG00000021368	cnot6b	100	86.786	ENSAMEG00000000949	CNOT6	99	86.786	Ailuropoda_melanoleuca
ENSPKIG00000021368	cnot6b	100	90.340	ENSACIG00000016566	cnot6b	100	90.340	Amphilophus_citrinellus
ENSPKIG00000021368	cnot6b	100	91.413	ENSAOCG00000006893	cnot6b	100	91.413	Amphiprion_ocellaris
ENSPKIG00000021368	cnot6b	100	91.413	ENSAPEG00000016949	cnot6b	100	91.413	Amphiprion_percula
ENSPKIG00000021368	cnot6b	100	89.267	ENSATEG00000007862	cnot6b	100	89.267	Anabas_testudineus
ENSPKIG00000021368	cnot6b	100	88.530	ENSAPLG00000012715	CNOT6	99	88.530	Anas_platyrhynchos
ENSPKIG00000021368	cnot6b	100	88.172	ENSACAG00000016548	CNOT6	100	88.172	Anolis_carolinensis
ENSPKIG00000021368	cnot6b	100	86.559	ENSANAG00000030436	CNOT6	96	86.559	Aotus_nancymaae
ENSPKIG00000021368	cnot6b	100	89.267	ENSACLG00000008279	cnot6b	100	89.982	Astatotilapia_calliptera
ENSPKIG00000021368	cnot6b	100	91.039	ENSAMXG00000019140	cnot6a	100	91.039	Astyanax_mexicanus
ENSPKIG00000021368	cnot6b	100	87.993	ENSAMXG00000034694	cnot6b	100	87.993	Astyanax_mexicanus
ENSPKIG00000021368	cnot6b	100	87.097	ENSBTAG00000017362	CNOT6	100	87.097	Bos_taurus
ENSPKIG00000021368	cnot6b	100	86.380	ENSCJAG00000009795	CNOT6	100	86.380	Callithrix_jacchus
ENSPKIG00000021368	cnot6b	100	87.097	ENSCAFG00000000464	CNOT6	100	87.097	Canis_familiaris
ENSPKIG00000021368	cnot6b	100	87.097	ENSCAFG00020002441	CNOT6	100	87.097	Canis_lupus_dingo
ENSPKIG00000021368	cnot6b	100	86.738	ENSCHIG00000019100	CNOT6	100	86.738	Capra_hircus
ENSPKIG00000021368	cnot6b	100	85.663	ENSTSYG00000003982	CNOT6	100	85.663	Carlito_syrichta
ENSPKIG00000021368	cnot6b	100	82.079	ENSCPOG00000035657	CNOT6	100	82.079	Cavia_porcellus
ENSPKIG00000021368	cnot6b	100	82.079	ENSCCAG00000033670	CNOT6	100	82.079	Cebus_capucinus
ENSPKIG00000021368	cnot6b	100	86.559	ENSCATG00000042014	CNOT6	100	86.559	Cercocebus_atys
ENSPKIG00000021368	cnot6b	100	85.663	ENSCLAG00000010489	CNOT6	100	85.663	Chinchilla_lanigera
ENSPKIG00000021368	cnot6b	100	86.559	ENSCSAG00000008165	CNOT6	100	86.559	Chlorocebus_sabaeus
ENSPKIG00000021368	cnot6b	100	86.559	ENSCHOG00000009680	CNOT6	100	86.559	Choloepus_hoffmanni
ENSPKIG00000021368	cnot6b	100	88.351	ENSCPBG00000008908	CNOT6	100	88.351	Chrysemys_picta_bellii
ENSPKIG00000021368	cnot6b	100	86.738	ENSCANG00000026756	CNOT6	100	86.738	Colobus_angolensis_palliatus
ENSPKIG00000021368	cnot6b	100	84.946	ENSCGRG00001011452	Cnot6	100	84.946	Cricetulus_griseus_chok1gshd
ENSPKIG00000021368	cnot6b	100	83.154	ENSCGRG00000010407	Cnot6	100	83.154	Cricetulus_griseus_crigri
ENSPKIG00000021368	cnot6b	100	90.161	ENSCSEG00000010939	cnot6b	100	90.161	Cynoglossus_semilaevis
ENSPKIG00000021368	cnot6b	100	90.161	ENSCVAG00000010538	cnot6b	100	90.161	Cyprinodon_variegatus
ENSPKIG00000021368	cnot6b	100	86.380	ENSDARG00000101072	cnot6b	100	86.380	Danio_rerio
ENSPKIG00000021368	cnot6b	100	91.756	ENSDARG00000008255	cnot6a	100	91.756	Danio_rerio
ENSPKIG00000021368	cnot6b	100	87.455	ENSDNOG00000041644	CNOT6	100	87.455	Dasypus_novemcinctus
ENSPKIG00000021368	cnot6b	100	78.136	ENSDORG00000001708	Cnot6	100	78.136	Dipodomys_ordii
ENSPKIG00000021368	cnot6b	100	70.125	ENSETEG00000006975	CNOT6	100	70.125	Echinops_telfairi
ENSPKIG00000021368	cnot6b	90	81.238	ENSEASG00005012957	-	99	81.238	Equus_asinus_asinus
ENSPKIG00000021368	cnot6b	100	86.559	ENSEASG00005012794	-	100	86.559	Equus_asinus_asinus
ENSPKIG00000021368	cnot6b	100	81.183	ENSECAG00000012704	-	99	81.183	Equus_caballus
ENSPKIG00000021368	cnot6b	100	87.097	ENSECAG00000019325	CNOT6	100	87.097	Equus_caballus
ENSPKIG00000021368	cnot6b	100	86.380	ENSEEUG00000015382	CNOT6	100	86.380	Erinaceus_europaeus
ENSPKIG00000021368	cnot6b	100	87.302	ENSELUG00000015981	cnot6b	99	87.302	Esox_lucius
ENSPKIG00000021368	cnot6b	100	86.738	ENSELUG00000024580	cnot6a	100	86.738	Esox_lucius
ENSPKIG00000021368	cnot6b	100	87.097	ENSFCAG00000001881	CNOT6	100	87.097	Felis_catus
ENSPKIG00000021368	cnot6b	100	88.351	ENSFALG00000007699	CNOT6	100	88.351	Ficedula_albicollis
ENSPKIG00000021368	cnot6b	100	85.125	ENSFDAG00000001999	CNOT6	100	85.125	Fukomys_damarensis
ENSPKIG00000021368	cnot6b	65	92.857	ENSFHEG00000013756	cnot6b	96	92.857	Fundulus_heteroclitus
ENSPKIG00000021368	cnot6b	95	89.981	ENSGMOG00000009767	cnot6b	99	89.981	Gadus_morhua
ENSPKIG00000021368	cnot6b	100	88.172	ENSGALG00000034316	CNOT6	100	88.172	Gallus_gallus
ENSPKIG00000021368	cnot6b	100	90.698	ENSGAFG00000008525	cnot6b	100	90.698	Gambusia_affinis
ENSPKIG00000021368	cnot6b	95	88.280	ENSGACG00000018046	cnot6b	99	88.280	Gasterosteus_aculeatus
ENSPKIG00000021368	cnot6b	100	74.552	ENSGAGG00000012176	CNOT6	100	74.552	Gopherus_agassizii
ENSPKIG00000021368	cnot6b	100	86.559	ENSGGOG00000003675	CNOT6	100	86.559	Gorilla_gorilla
ENSPKIG00000021368	cnot6b	100	89.445	ENSHBUG00000002819	cnot6b	100	90.161	Haplochromis_burtoni
ENSPKIG00000021368	cnot6b	100	85.305	ENSHGLG00000017756	CNOT6	100	85.305	Heterocephalus_glaber_female
ENSPKIG00000021368	cnot6b	100	85.305	ENSHGLG00100005747	CNOT6	100	85.305	Heterocephalus_glaber_male
ENSPKIG00000021368	cnot6b	100	88.193	ENSHCOG00000016176	cnot6b	100	88.909	Hippocampus_comes
ENSPKIG00000021368	cnot6b	100	87.634	ENSIPUG00000017482	cnot6b	100	87.634	Ictalurus_punctatus
ENSPKIG00000021368	cnot6b	100	89.247	ENSIPUG00000019831	cnot6a	100	89.247	Ictalurus_punctatus
ENSPKIG00000021368	cnot6b	100	86.918	ENSSTOG00000002803	CNOT6	100	86.918	Ictidomys_tridecemlineatus
ENSPKIG00000021368	cnot6b	100	85.305	ENSJJAG00000012296	Cnot6	100	85.305	Jaculus_jaculus
ENSPKIG00000021368	cnot6b	100	89.803	ENSKMAG00000004640	cnot6b	100	89.803	Kryptolebias_marmoratus
ENSPKIG00000021368	cnot6b	100	89.267	ENSLBEG00000027917	cnot6b	100	89.982	Labrus_bergylta
ENSPKIG00000021368	cnot6b	100	94.086	ENSLOCG00000010102	cnot6b	99	94.086	Lepisosteus_oculatus
ENSPKIG00000021368	cnot6b	100	87.455	ENSLAFG00000016742	CNOT6	100	87.455	Loxodonta_africana
ENSPKIG00000021368	cnot6b	100	86.559	ENSMFAG00000030867	CNOT6	100	86.559	Macaca_fascicularis
ENSPKIG00000021368	cnot6b	100	86.559	ENSMMUG00000018690	CNOT6	100	86.559	Macaca_mulatta
ENSPKIG00000021368	cnot6b	100	86.559	ENSMNEG00000038565	CNOT6	100	86.559	Macaca_nemestrina
ENSPKIG00000021368	cnot6b	100	86.559	ENSMLEG00000010555	CNOT6	100	86.559	Mandrillus_leucophaeus
ENSPKIG00000021368	cnot6b	100	91.234	ENSMAMG00000007515	cnot6b	100	91.234	Mastacembelus_armatus
ENSPKIG00000021368	cnot6b	100	89.267	ENSMZEG00005012899	cnot6b	100	89.982	Maylandia_zebra
ENSPKIG00000021368	cnot6b	100	85.842	ENSMAUG00000019798	Cnot6	100	85.842	Mesocricetus_auratus
ENSPKIG00000021368	cnot6b	98	79.083	ENSMICG00000028378	-	99	79.083	Microcebus_murinus
ENSPKIG00000021368	cnot6b	100	85.663	ENSMICG00000013018	-	100	85.663	Microcebus_murinus
ENSPKIG00000021368	cnot6b	100	85.842	ENSMOCG00000021662	Cnot6	100	85.842	Microtus_ochrogaster
ENSPKIG00000021368	cnot6b	100	88.530	ENSMMOG00000003227	cnot6b	100	88.530	Mola_mola
ENSPKIG00000021368	cnot6b	100	87.814	ENSMODG00000003979	CNOT6	100	87.814	Monodelphis_domestica
ENSPKIG00000021368	cnot6b	100	90.877	ENSMALG00000014251	cnot6b	100	90.877	Monopterus_albus
ENSPKIG00000021368	cnot6b	100	86.022	MGP_CAROLIEiJ_G0016277	Cnot6	100	86.022	Mus_caroli
ENSPKIG00000021368	cnot6b	100	86.022	ENSMUSG00000020362	Cnot6	100	86.022	Mus_musculus
ENSPKIG00000021368	cnot6b	100	86.022	MGP_PahariEiJ_G0017413	Cnot6	100	86.022	Mus_pahari
ENSPKIG00000021368	cnot6b	100	86.022	MGP_SPRETEiJ_G0017122	Cnot6	100	86.022	Mus_spretus
ENSPKIG00000021368	cnot6b	100	87.097	ENSMPUG00000000587	CNOT6	96	87.097	Mustela_putorius_furo
ENSPKIG00000021368	cnot6b	100	85.080	ENSMLUG00000010257	CNOT6	100	85.080	Myotis_lucifugus
ENSPKIG00000021368	cnot6b	100	85.484	ENSNGAG00000008269	Cnot6	100	85.484	Nannospalax_galili
ENSPKIG00000021368	cnot6b	100	89.445	ENSNBRG00000010798	cnot6b	100	90.161	Neolamprologus_brichardi
ENSPKIG00000021368	cnot6b	100	85.484	ENSNLEG00000002322	CNOT6	100	85.484	Nomascus_leucogenys
ENSPKIG00000021368	cnot6b	81	83.256	ENSMEUG00000000025	CNOT6	81	83.256	Notamacropus_eugenii
ENSPKIG00000021368	cnot6b	88	87.619	ENSOPRG00000008244	-	88	87.619	Ochotona_princeps
ENSPKIG00000021368	cnot6b	100	84.946	ENSODEG00000007041	CNOT6	100	84.946	Octodon_degus
ENSPKIG00000021368	cnot6b	75	90.780	ENSONIG00000013027	cnot6b	99	90.780	Oreochromis_niloticus
ENSPKIG00000021368	cnot6b	100	86.380	ENSOANG00000010226	CNOT6	100	86.380	Ornithorhynchus_anatinus
ENSPKIG00000021368	cnot6b	100	85.893	ENSOCUG00000011083	CNOT6	100	85.893	Oryctolagus_cuniculus
ENSPKIG00000021368	cnot6b	100	90.161	ENSORLG00000005059	cnot6b	100	90.161	Oryzias_latipes
ENSPKIG00000021368	cnot6b	100	90.161	ENSORLG00020012784	cnot6b	100	90.161	Oryzias_latipes_hni
ENSPKIG00000021368	cnot6b	94	89.293	ENSORLG00015022658	cnot6b	98	89.293	Oryzias_latipes_hsok
ENSPKIG00000021368	cnot6b	100	90.698	ENSOMEG00000005295	cnot6b	100	90.698	Oryzias_melastigma
ENSPKIG00000021368	cnot6b	94	86.095	ENSOGAG00000032470	CNOT6	100	86.095	Otolemur_garnettii
ENSPKIG00000021368	cnot6b	97	86.188	ENSOARG00000001003	CNOT6	100	86.188	Ovis_aries
ENSPKIG00000021368	cnot6b	100	86.559	ENSPPAG00000032253	CNOT6	100	86.559	Pan_paniscus
ENSPKIG00000021368	cnot6b	100	86.918	ENSPPRG00000011912	CNOT6	100	86.918	Panthera_pardus
ENSPKIG00000021368	cnot6b	100	86.918	ENSPTIG00000016794	CNOT6	100	86.918	Panthera_tigris_altaica
ENSPKIG00000021368	cnot6b	100	86.559	ENSPTRG00000017636	CNOT6	100	86.559	Pan_troglodytes
ENSPKIG00000021368	cnot6b	100	86.559	ENSPANG00000016191	CNOT6	100	86.559	Papio_anubis
ENSPKIG00000021368	cnot6b	98	88.257	ENSPSIG00000017307	CNOT6	100	88.257	Pelodiscus_sinensis
ENSPKIG00000021368	cnot6b	100	89.982	ENSPMGG00000011238	cnot6b	100	89.982	Periophthalmus_magnuspinnatus
ENSPKIG00000021368	cnot6b	100	85.484	ENSPEMG00000000627	Cnot6	100	85.484	Peromyscus_maniculatus_bairdii
ENSPKIG00000021368	cnot6b	100	87.993	ENSPCIG00000020319	CNOT6	99	87.993	Phascolarctos_cinereus
ENSPKIG00000021368	cnot6b	100	90.698	ENSPFOG00000006291	cnot6b	100	90.698	Poecilia_formosa
ENSPKIG00000021368	cnot6b	100	86.941	ENSPLAG00000008266	cnot6b	100	86.941	Poecilia_latipinna
ENSPKIG00000021368	cnot6b	100	90.877	ENSPMEG00000009091	cnot6b	100	90.877	Poecilia_mexicana
ENSPKIG00000021368	cnot6b	100	89.624	ENSPREG00000003713	cnot6b	100	89.624	Poecilia_reticulata
ENSPKIG00000021368	cnot6b	100	86.559	ENSPPYG00000016137	CNOT6	100	86.559	Pongo_abelii
ENSPKIG00000021368	cnot6b	71	83.895	ENSPCAG00000005599	-	71	83.895	Procavia_capensis
ENSPKIG00000021368	cnot6b	100	81.541	ENSPCOG00000017359	CNOT6	100	82.258	Propithecus_coquereli
ENSPKIG00000021368	cnot6b	100	83.333	ENSPVAG00000003069	CNOT6	100	83.333	Pteropus_vampyrus
ENSPKIG00000021368	cnot6b	100	89.445	ENSPNYG00000000321	cnot6b	100	90.161	Pundamilia_nyererei
ENSPKIG00000021368	cnot6b	100	89.785	ENSPNAG00000028816	cnot6b	100	89.785	Pygocentrus_nattereri
ENSPKIG00000021368	cnot6b	100	91.219	ENSPNAG00000029586	cnot6a	100	91.219	Pygocentrus_nattereri
ENSPKIG00000021368	cnot6b	100	85.305	ENSRNOG00000054891	Cnot6	100	85.305	Rattus_norvegicus
ENSPKIG00000021368	cnot6b	100	86.380	ENSRBIG00000004309	CNOT6	100	86.380	Rhinopithecus_bieti
ENSPKIG00000021368	cnot6b	100	86.380	ENSRROG00000035378	CNOT6	100	86.380	Rhinopithecus_roxellana
ENSPKIG00000021368	cnot6b	100	86.738	ENSSBOG00000030494	CNOT6	100	86.738	Saimiri_boliviensis_boliviensis
ENSPKIG00000021368	cnot6b	100	87.814	ENSSHAG00000017436	CNOT6	100	87.814	Sarcophilus_harrisii
ENSPKIG00000021368	cnot6b	100	90.681	ENSSFOG00015022383	cnot6a	96	90.681	Scleropages_formosus
ENSPKIG00000021368	cnot6b	100	94.086	ENSSFOG00015015133	CNOT6	100	94.086	Scleropages_formosus
ENSPKIG00000021368	cnot6b	100	89.445	ENSSMAG00000003084	cnot6b	100	89.445	Scophthalmus_maximus
ENSPKIG00000021368	cnot6b	100	91.055	ENSSDUG00000004151	cnot6b	100	91.055	Seriola_dumerili
ENSPKIG00000021368	cnot6b	100	90.340	ENSSLDG00000004448	cnot6b	100	91.055	Seriola_lalandi_dorsalis
ENSPKIG00000021368	cnot6b	64	67.131	ENSSARG00000012650	-	100	67.131	Sorex_araneus
ENSPKIG00000021368	cnot6b	100	88.172	ENSSPUG00000007893	CNOT6	100	88.172	Sphenodon_punctatus
ENSPKIG00000021368	cnot6b	100	91.592	ENSSPAG00000000149	cnot6b	100	91.592	Stegastes_partitus
ENSPKIG00000021368	cnot6b	100	86.918	ENSSSCG00000014009	CNOT6	100	86.918	Sus_scrofa
ENSPKIG00000021368	cnot6b	100	87.993	ENSTGUG00000001119	CNOT6	100	87.993	Taeniopygia_guttata
ENSPKIG00000021368	cnot6b	100	88.710	ENSTRUG00000002818	cnot6b	100	88.710	Takifugu_rubripes
ENSPKIG00000021368	cnot6b	100	89.606	ENSTNIG00000004443	cnot6b	99	89.606	Tetraodon_nigroviridis
ENSPKIG00000021368	cnot6b	76	77.612	ENSTBEG00000017094	-	87	77.612	Tupaia_belangeri
ENSPKIG00000021368	cnot6b	100	87.097	ENSTTRG00000009363	CNOT6	100	87.097	Tursiops_truncatus
ENSPKIG00000021368	cnot6b	90	76.190	ENSUAMG00000004579	CNOT6	99	76.190	Ursus_americanus
ENSPKIG00000021368	cnot6b	100	82.906	ENSUMAG00000024577	CNOT6	100	82.906	Ursus_maritimus
ENSPKIG00000021368	cnot6b	84	91.892	ENSVPAG00000003593	CNOT6	83	91.892	Vicugna_pacos
ENSPKIG00000021368	cnot6b	100	87.097	ENSVVUG00000026940	CNOT6	100	87.097	Vulpes_vulpes
ENSPKIG00000021368	cnot6b	100	87.299	ENSXCOG00000003360	cnot6b	100	87.299	Xiphophorus_couchianus
ENSPKIG00000021368	cnot6b	100	90.877	ENSXMAG00000008730	cnot6b	100	90.877	Xiphophorus_maculatus