EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000021517 (Gene tree)
Gene ID: 111834577
Gene Symbol: shq1
Alias: -
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 28994 bases
Position: chrPGUA01000050.1:923845-952838
Accession: 111834577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000004388	SHQ1	PF04925.15	1.6e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000028370	-	2653	-	ENSPKIP00000004388	563 (aa)	XP_023649798	UPI000CD60496

Gene Model

Click here to download ENSPKIG00000021517's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000021517's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000021517	shq1	93	48.348	ENSG00000144736	SHQ1	96	72.917	Homo_sapiens
ENSPKIG00000021517	shq1	93	49.913	ENSAMEG00000015140	SHQ1	74	58.508	Ailuropoda_melanoleuca
ENSPKIG00000021517	shq1	72	69.042	ENSACIG00000021249	shq1	99	53.566	Amphilophus_citrinellus
ENSPKIG00000021517	shq1	72	70.416	ENSAPEG00000021686	shq1	69	70.379	Amphiprion_percula
ENSPKIG00000021517	shq1	76	69.838	ENSATEG00000008475	shq1	98	55.966	Anabas_testudineus
ENSPKIG00000021517	shq1	72	59.952	ENSAPLG00000013926	SHQ1	84	59.441	Anas_platyrhynchos
ENSPKIG00000021517	shq1	74	59.579	ENSACAG00000014809	SHQ1	64	59.861	Anolis_carolinensis
ENSPKIG00000021517	shq1	91	49.910	ENSANAG00000029241	SHQ1	74	58.701	Aotus_nancymaae
ENSPKIG00000021517	shq1	72	41.809	ENSANAG00000030500	-	71	42.067	Aotus_nancymaae
ENSPKIG00000021517	shq1	75	67.898	ENSACLG00000023077	shq1	99	53.566	Astatotilapia_calliptera
ENSPKIG00000021517	shq1	74	66.508	ENSAMXG00000043822	shq1	90	58.022	Astyanax_mexicanus
ENSPKIG00000021517	shq1	93	48.691	ENSBTAG00000005436	SHQ1	99	49.476	Bos_taurus
ENSPKIG00000021517	shq1	77	32.735	WBGene00021655	Y48A5A.1	97	33.867	Caenorhabditis_elegans
ENSPKIG00000021517	shq1	91	49.464	ENSCJAG00000015131	SHQ1	74	58.701	Callithrix_jacchus
ENSPKIG00000021517	shq1	93	47.931	ENSCHIG00000012271	SHQ1	84	50.000	Capra_hircus
ENSPKIG00000021517	shq1	72	56.691	ENSTSYG00000014439	SHQ1	74	56.103	Carlito_syrichta
ENSPKIG00000021517	shq1	85	42.688	ENSCAPG00000009343	SHQ1	61	66.216	Cavia_aperea
ENSPKIG00000021517	shq1	72	56.250	ENSCPOG00000011443	SHQ1	73	56.944	Cavia_porcellus
ENSPKIG00000021517	shq1	71	45.297	ENSCCAG00000036087	-	72	44.869	Cebus_capucinus
ENSPKIG00000021517	shq1	72	50.483	ENSCCAG00000027080	SHQ1	72	50.117	Cebus_capucinus
ENSPKIG00000021517	shq1	93	49.565	ENSCATG00000041238	SHQ1	74	60.000	Cercocebus_atys
ENSPKIG00000021517	shq1	72	58.937	ENSCLAG00000004206	SHQ1	74	58.837	Chinchilla_lanigera
ENSPKIG00000021517	shq1	79	46.138	ENSCSAG00000011514	SHQ1	69	57.478	Chlorocebus_sabaeus
ENSPKIG00000021517	shq1	60	47.813	ENSCHOG00000003273	-	99	47.813	Choloepus_hoffmanni
ENSPKIG00000021517	shq1	98	48.124	ENSCPBG00000006441	SHQ1	99	48.282	Chrysemys_picta_bellii
ENSPKIG00000021517	shq1	72	41.606	ENSCING00000008013	-	93	40.845	Ciona_intestinalis
ENSPKIG00000021517	shq1	69	39.846	ENSCSAVG00000002332	-	96	38.771	Ciona_savignyi
ENSPKIG00000021517	shq1	94	49.129	ENSCANG00000039295	SHQ1	75	59.579	Colobus_angolensis_palliatus
ENSPKIG00000021517	shq1	77	57.273	ENSCGRG00001012583	Shq1	76	58.042	Cricetulus_griseus_chok1gshd
ENSPKIG00000021517	shq1	77	57.273	ENSCGRG00000009849	Shq1	76	58.042	Cricetulus_griseus_crigri
ENSPKIG00000021517	shq1	76	65.904	ENSCVAG00000020049	shq1	99	56.529	Cyprinodon_variegatus
ENSPKIG00000021517	shq1	76	68.298	ENSDARG00000058522	shq1	71	69.048	Danio_rerio
ENSPKIG00000021517	shq1	93	48.155	ENSDNOG00000033937	SHQ1	74	58.741	Dasypus_novemcinctus
ENSPKIG00000021517	shq1	72	50.966	ENSETEG00000005766	SHQ1	75	50.583	Echinops_telfairi
ENSPKIG00000021517	shq1	60	46.939	ENSEBUG00000005445	shq1	76	47.605	Eptatretus_burgeri
ENSPKIG00000021517	shq1	72	59.179	ENSEASG00005002237	SHQ1	74	58.645	Equus_asinus_asinus
ENSPKIG00000021517	shq1	72	59.420	ENSECAG00000015673	SHQ1	73	58.879	Equus_caballus
ENSPKIG00000021517	shq1	72	58.696	ENSEEUG00000010568	SHQ1	74	58.411	Erinaceus_europaeus
ENSPKIG00000021517	shq1	97	60.243	ENSELUG00000003476	shq1	98	60.720	Esox_lucius
ENSPKIG00000021517	shq1	94	49.825	ENSFCAG00000012781	SHQ1	75	58.974	Felis_catus
ENSPKIG00000021517	shq1	98	48.689	ENSFALG00000013428	SHQ1	99	49.100	Ficedula_albicollis
ENSPKIG00000021517	shq1	98	53.523	ENSFHEG00000017552	shq1	99	54.592	Fundulus_heteroclitus
ENSPKIG00000021517	shq1	69	69.231	ENSGMOG00000007350	shq1	100	70.000	Gadus_morhua
ENSPKIG00000021517	shq1	98	47.705	ENSGALG00000007798	SHQ1	99	47.463	Gallus_gallus
ENSPKIG00000021517	shq1	69	67.949	ENSGACG00000011797	shq1	100	68.462	Gasterosteus_aculeatus
ENSPKIG00000021517	shq1	94	48.294	ENSGGOG00000034818	SHQ1	74	58.605	Gorilla_gorilla
ENSPKIG00000021517	shq1	75	67.667	ENSHBUG00000010857	shq1	99	56.406	Haplochromis_burtoni
ENSPKIG00000021517	shq1	72	57.005	ENSHGLG00000003637	SHQ1	67	56.613	Heterocephalus_glaber_female
ENSPKIG00000021517	shq1	72	57.005	ENSHGLG00100011957	SHQ1	67	56.613	Heterocephalus_glaber_male
ENSPKIG00000021517	shq1	98	54.839	ENSHCOG00000010799	shq1	99	54.146	Hippocampus_comes
ENSPKIG00000021517	shq1	78	66.892	ENSIPUG00000001247	shq1	73	69.976	Ictalurus_punctatus
ENSPKIG00000021517	shq1	72	58.111	ENSSTOG00000010043	SHQ1	78	57.477	Ictidomys_tridecemlineatus
ENSPKIG00000021517	shq1	93	50.000	ENSJJAG00000017611	Shq1	69	70.270	Jaculus_jaculus
ENSPKIG00000021517	shq1	98	56.947	ENSKMAG00000004457	shq1	98	56.588	Kryptolebias_marmoratus
ENSPKIG00000021517	shq1	76	66.216	ENSLOCG00000009970	shq1	99	53.344	Lepisosteus_oculatus
ENSPKIG00000021517	shq1	93	35.221	ENSMFAG00000037396	-	72	40.662	Macaca_fascicularis
ENSPKIG00000021517	shq1	93	49.215	ENSMFAG00000039148	SHQ1	74	60.233	Macaca_fascicularis
ENSPKIG00000021517	shq1	85	46.857	ENSMMUG00000009571	SHQ1	69	58.377	Macaca_mulatta
ENSPKIG00000021517	shq1	93	35.221	ENSMMUG00000021761	-	72	40.662	Macaca_mulatta
ENSPKIG00000021517	shq1	93	49.215	ENSMNEG00000032667	SHQ1	74	60.233	Macaca_nemestrina
ENSPKIG00000021517	shq1	93	49.391	ENSMLEG00000038493	SHQ1	74	59.767	Mandrillus_leucophaeus
ENSPKIG00000021517	shq1	72	68.932	ENSMAMG00000023432	shq1	66	68.632	Mastacembelus_armatus
ENSPKIG00000021517	shq1	75	67.898	ENSMZEG00005008649	shq1	99	56.073	Maylandia_zebra
ENSPKIG00000021517	shq1	98	48.259	ENSMGAG00000009640	SHQ1	99	48.922	Meleagris_gallopavo
ENSPKIG00000021517	shq1	77	56.787	ENSMAUG00000022030	Shq1	70	68.293	Mesocricetus_auratus
ENSPKIG00000021517	shq1	93	47.359	ENSMICG00000009224	SHQ1	74	56.512	Microcebus_murinus
ENSPKIG00000021517	shq1	76	57.763	ENSMOCG00000017836	Shq1	65	70.270	Microtus_ochrogaster
ENSPKIG00000021517	shq1	97	54.872	ENSMMOG00000010569	shq1	71	68.333	Mola_mola
ENSPKIG00000021517	shq1	76	55.000	ENSMODG00000003926	SHQ1	77	55.814	Monodelphis_domestica
ENSPKIG00000021517	shq1	98	57.383	ENSMALG00000008870	shq1	99	58.446	Monopterus_albus
ENSPKIG00000021517	shq1	76	57.692	MGP_CAROLIEiJ_G0028689	Shq1	65	68.919	Mus_caroli
ENSPKIG00000021517	shq1	76	57.078	ENSMUSG00000035378	Shq1	65	68.919	Mus_musculus
ENSPKIG00000021517	shq1	76	57.466	MGP_PahariEiJ_G0022440	Shq1	98	55.600	Mus_pahari
ENSPKIG00000021517	shq1	93	51.201	MGP_SPRETEiJ_G0029717	Shq1	65	68.919	Mus_spretus
ENSPKIG00000021517	shq1	94	50.000	ENSMPUG00000017006	SHQ1	73	58.974	Mustela_putorius_furo
ENSPKIG00000021517	shq1	82	45.455	ENSMLUG00000013539	SHQ1	73	55.208	Myotis_lucifugus
ENSPKIG00000021517	shq1	93	45.259	ENSNGAG00000023317	Shq1	75	54.157	Nannospalax_galili
ENSPKIG00000021517	shq1	60	64.244	ENSNBRG00000024004	shq1	99	51.550	Neolamprologus_brichardi
ENSPKIG00000021517	shq1	93	48.522	ENSNLEG00000002731	SHQ1	74	58.237	Nomascus_leucogenys
ENSPKIG00000021517	shq1	97	34.601	ENSMEUG00000009350	-	79	38.551	Notamacropus_eugenii
ENSPKIG00000021517	shq1	72	57.627	ENSODEG00000009192	SHQ1	90	59.641	Octodon_degus
ENSPKIG00000021517	shq1	75	67.667	ENSONIG00000020264	shq1	99	55.776	Oreochromis_niloticus
ENSPKIG00000021517	shq1	93	47.938	ENSOCUG00000016695	SHQ1	73	59.165	Oryctolagus_cuniculus
ENSPKIG00000021517	shq1	72	68.382	ENSORLG00000023538	shq1	77	68.409	Oryzias_latipes
ENSPKIG00000021517	shq1	72	68.873	ENSORLG00020003697	shq1	76	68.884	Oryzias_latipes_hni
ENSPKIG00000021517	shq1	72	68.382	ENSORLG00015021040	shq1	77	68.409	Oryzias_latipes_hsok
ENSPKIG00000021517	shq1	72	68.215	ENSOMEG00000001225	shq1	76	67.933	Oryzias_melastigma
ENSPKIG00000021517	shq1	91	48.301	ENSOGAG00000003898	SHQ1	76	56.452	Otolemur_garnettii
ENSPKIG00000021517	shq1	93	48.522	ENSPPAG00000027714	SHQ1	74	58.469	Pan_paniscus
ENSPKIG00000021517	shq1	94	36.934	ENSPPAG00000043263	-	72	42.032	Pan_paniscus
ENSPKIG00000021517	shq1	94	49.655	ENSPPRG00000004769	SHQ1	74	58.974	Panthera_pardus
ENSPKIG00000021517	shq1	94	47.902	ENSPTIG00000011478	SHQ1	74	57.075	Panthera_tigris_altaica
ENSPKIG00000021517	shq1	94	36.189	ENSPTRG00000048303	-	71	41.067	Pan_troglodytes
ENSPKIG00000021517	shq1	93	48.522	ENSPTRG00000015106	SHQ1	74	58.469	Pan_troglodytes
ENSPKIG00000021517	shq1	93	48.866	ENSPANG00000002881	SHQ1	74	60.233	Papio_anubis
ENSPKIG00000021517	shq1	76	58.124	ENSPSIG00000005536	SHQ1	70	58.741	Pelodiscus_sinensis
ENSPKIG00000021517	shq1	76	64.516	ENSPMGG00000008838	shq1	72	64.941	Periophthalmus_magnuspinnatus
ENSPKIG00000021517	shq1	53	79.661	ENSPEMG00000000251	Shq1	69	71.622	Peromyscus_maniculatus_bairdii
ENSPKIG00000021517	shq1	74	58.933	ENSPMAG00000005372	shq1	96	60.280	Petromyzon_marinus
ENSPKIG00000021517	shq1	72	64.806	ENSPFOG00000003118	shq1	78	66.118	Poecilia_formosa
ENSPKIG00000021517	shq1	56	63.240	ENSPMEG00000011076	shq1	74	64.072	Poecilia_mexicana
ENSPKIG00000021517	shq1	64	64.365	ENSPREG00000000591	shq1	72	64.800	Poecilia_reticulata
ENSPKIG00000021517	shq1	94	48.709	ENSPPYG00000013717	SHQ1	74	58.837	Pongo_abelii
ENSPKIG00000021517	shq1	72	59.712	ENSPCAG00000009035	SHQ1	75	59.441	Procavia_capensis
ENSPKIG00000021517	shq1	72	57.995	ENSPCOG00000008415	SHQ1	74	58.065	Propithecus_coquereli
ENSPKIG00000021517	shq1	94	47.160	ENSPVAG00000017392	SHQ1	74	57.809	Pteropus_vampyrus
ENSPKIG00000021517	shq1	75	67.898	ENSPNYG00000003878	shq1	99	55.941	Pundamilia_nyererei
ENSPKIG00000021517	shq1	74	70.449	ENSPNAG00000026840	shq1	98	58.249	Pygocentrus_nattereri
ENSPKIG00000021517	shq1	78	56.319	ENSRNOG00000005433	Shq1	71	58.275	Rattus_norvegicus
ENSPKIG00000021517	shq1	94	47.452	ENSRBIG00000026280	SHQ1	74	57.412	Rhinopithecus_bieti
ENSPKIG00000021517	shq1	94	49.479	ENSRROG00000034126	SHQ1	75	60.000	Rhinopithecus_roxellana
ENSPKIG00000021517	shq1	72	52.542	ENSSBOG00000021038	SHQ1	72	52.103	Saimiri_boliviensis_boliviensis
ENSPKIG00000021517	shq1	76	55.125	ENSSHAG00000015077	SHQ1	76	57.077	Sarcophilus_harrisii
ENSPKIG00000021517	shq1	98	62.632	ENSSFOG00015016241	shq1	99	62.632	Scleropages_formosus
ENSPKIG00000021517	shq1	99	55.464	ENSSMAG00000016151	shq1	98	55.912	Scophthalmus_maximus
ENSPKIG00000021517	shq1	72	70.560	ENSSDUG00000011986	shq1	69	70.686	Seriola_dumerili
ENSPKIG00000021517	shq1	98	55.372	ENSSLDG00000013908	shq1	99	56.572	Seriola_lalandi_dorsalis
ENSPKIG00000021517	shq1	93	43.162	ENSSARG00000007119	SHQ1	76	49.061	Sorex_araneus
ENSPKIG00000021517	shq1	60	54.391	ENSSPUG00000011526	-	64	55.556	Sphenodon_punctatus
ENSPKIG00000021517	shq1	93	49.040	ENSSSCG00000011518	SHQ1	74	57.809	Sus_scrofa
ENSPKIG00000021517	shq1	72	61.575	ENSTGUG00000009933	SHQ1	75	61.060	Taeniopygia_guttata
ENSPKIG00000021517	shq1	72	64.461	ENSTRUG00000009446	shq1	98	54.138	Takifugu_rubripes
ENSPKIG00000021517	shq1	72	62.683	ENSTNIG00000007354	shq1	94	62.972	Tetraodon_nigroviridis
ENSPKIG00000021517	shq1	63	72.340	ENSTBEG00000011295	SHQ1	69	72.340	Tupaia_belangeri
ENSPKIG00000021517	shq1	94	47.924	ENSTTRG00000005320	SHQ1	74	57.343	Tursiops_truncatus
ENSPKIG00000021517	shq1	93	50.000	ENSUMAG00000024031	SHQ1	73	59.338	Ursus_maritimus
ENSPKIG00000021517	shq1	70	45.982	ENSVPAG00000004880	SHQ1	72	49.738	Vicugna_pacos
ENSPKIG00000021517	shq1	76	58.102	ENSXETG00000032215	shq1	70	59.479	Xenopus_tropicalis