EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000021610 (Gene tree)
Gene ID: 111846902
Gene Symbol: snrpd1
Alias: -
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 1007 bases
Position: chrPGUA01000162.1:170838-171844
Accession: ZDB-GENE-020419-14
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000004543	LSM	PF01423.22	1.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000028527	-	339	-	ENSPKIP00000004543	112 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000021610's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000021610's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000021610	snrpd1	89	30.769	ENSPKIG00000006412	snrpd3l	65	31.325
ENSPKIG00000021610	snrpd1	100	97.321	ENSPKIG00000003985	SNRPD1	94	97.321

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000021610	snrpd1	94	95.238	ENSG00000167088	SNRPD1	91	92.647	Homo_sapiens
ENSPKIG00000021610	snrpd1	100	99.107	ENSAPOG00000019446	snrpd1	61	99.107	Acanthochromis_polyacanthus
ENSPKIG00000021610	snrpd1	94	95.238	ENSAMEG00000002576	SNRPD1	90	95.238	Ailuropoda_melanoleuca
ENSPKIG00000021610	snrpd1	100	99.107	ENSACIG00000011263	snrpd1	100	99.107	Amphilophus_citrinellus
ENSPKIG00000021610	snrpd1	100	99.107	ENSAOCG00000007406	snrpd1	94	99.107	Amphiprion_ocellaris
ENSPKIG00000021610	snrpd1	100	94.643	ENSAPEG00000014961	snrpd1	94	94.643	Amphiprion_percula
ENSPKIG00000021610	snrpd1	100	99.107	ENSAPEG00000012539	SNRPD1	100	99.107	Amphiprion_percula
ENSPKIG00000021610	snrpd1	100	99.107	ENSATEG00000014399	snrpd1	100	99.107	Anabas_testudineus
ENSPKIG00000021610	snrpd1	94	95.238	ENSAPLG00000012256	SNRPD1	88	95.238	Anas_platyrhynchos
ENSPKIG00000021610	snrpd1	94	95.238	ENSACAG00000006364	SNRPD1	88	95.238	Anolis_carolinensis
ENSPKIG00000021610	snrpd1	94	95.238	ENSANAG00000025641	SNRPD1	88	95.238	Aotus_nancymaae
ENSPKIG00000021610	snrpd1	100	99.107	ENSACLG00000017406	snrpd1	100	99.107	Astatotilapia_calliptera
ENSPKIG00000021610	snrpd1	100	98.214	ENSAMXG00000004589	snrpd1	94	98.214	Astyanax_mexicanus
ENSPKIG00000021610	snrpd1	94	95.238	ENSBTAG00000008292	SNRPD1	88	95.238	Bos_taurus
ENSPKIG00000021610	snrpd1	94	92.381	ENSBTAG00000047266	-	88	92.381	Bos_taurus
ENSPKIG00000021610	snrpd1	78	94.253	ENSBTAG00000012376	-	66	93.182	Bos_taurus
ENSPKIG00000021610	snrpd1	78	93.103	ENSBTAG00000055316	-	75	93.103	Bos_taurus
ENSPKIG00000021610	snrpd1	71	77.215	WBGene00004916	snr-3	69	72.414	Caenorhabditis_elegans
ENSPKIG00000021610	snrpd1	94	95.238	ENSCJAG00000042955	SNRPD1	88	95.238	Callithrix_jacchus
ENSPKIG00000021610	snrpd1	94	95.238	ENSCAFG00000018247	SNRPD1	88	95.238	Canis_familiaris
ENSPKIG00000021610	snrpd1	79	95.455	ENSCAFG00020015914	SNRPD1	69	95.455	Canis_lupus_dingo
ENSPKIG00000021610	snrpd1	94	95.238	ENSCHIG00000005557	SNRPD1	88	95.238	Capra_hircus
ENSPKIG00000021610	snrpd1	94	95.238	ENSTSYG00000030028	SNRPD1	88	95.238	Carlito_syrichta
ENSPKIG00000021610	snrpd1	94	95.238	ENSCAPG00000008103	SNRPD1	91	95.238	Cavia_aperea
ENSPKIG00000021610	snrpd1	94	95.238	ENSCPOG00000004679	SNRPD1	91	95.238	Cavia_porcellus
ENSPKIG00000021610	snrpd1	79	92.045	ENSCCAG00000005390	-	75	91.011	Cebus_capucinus
ENSPKIG00000021610	snrpd1	94	95.238	ENSCCAG00000032658	SNRPD1	88	95.238	Cebus_capucinus
ENSPKIG00000021610	snrpd1	94	94.286	ENSCCAG00000020611	-	88	94.286	Cebus_capucinus
ENSPKIG00000021610	snrpd1	94	92.381	ENSCCAG00000016652	-	88	92.381	Cebus_capucinus
ENSPKIG00000021610	snrpd1	94	95.238	ENSCATG00000039978	SNRPD1	88	95.238	Cercocebus_atys
ENSPKIG00000021610	snrpd1	94	95.238	ENSCLAG00000008691	SNRPD1	88	95.238	Chinchilla_lanigera
ENSPKIG00000021610	snrpd1	94	95.238	ENSCSAG00000017654	SNRPD1	88	95.238	Chlorocebus_sabaeus
ENSPKIG00000021610	snrpd1	94	95.238	ENSCPBG00000023143	SNRPD1	88	95.238	Chrysemys_picta_bellii
ENSPKIG00000021610	snrpd1	71	84.810	ENSCING00000024100	-	63	84.810	Ciona_intestinalis
ENSPKIG00000021610	snrpd1	71	83.750	ENSCSAVG00000004578	-	64	83.750	Ciona_savignyi
ENSPKIG00000021610	snrpd1	78	71.264	ENSCGRG00001009945	-	77	70.455	Cricetulus_griseus_chok1gshd
ENSPKIG00000021610	snrpd1	94	95.238	ENSCGRG00001021055	-	88	95.238	Cricetulus_griseus_chok1gshd
ENSPKIG00000021610	snrpd1	94	95.238	ENSCGRG00000000490	-	88	95.238	Cricetulus_griseus_crigri
ENSPKIG00000021610	snrpd1	78	71.264	ENSCGRG00000006224	-	77	70.455	Cricetulus_griseus_crigri
ENSPKIG00000021610	snrpd1	100	97.321	ENSCSEG00000018141	snrpd1	94	97.321	Cynoglossus_semilaevis
ENSPKIG00000021610	snrpd1	100	99.107	ENSCVAG00000000534	snrpd1	94	99.107	Cyprinodon_variegatus
ENSPKIG00000021610	snrpd1	100	98.214	ENSDARG00000011648	snrpd1	94	98.214	Danio_rerio
ENSPKIG00000021610	snrpd1	94	95.238	ENSDNOG00000040310	SNRPD1	88	95.238	Dasypus_novemcinctus
ENSPKIG00000021610	snrpd1	94	95.238	ENSDORG00000008349	Snrpd1	88	95.238	Dipodomys_ordii
ENSPKIG00000021610	snrpd1	78	79.310	FBgn0261933	SmD1	70	79.310	Drosophila_melanogaster
ENSPKIG00000021610	snrpd1	72	93.827	ENSETEG00000011689	SNRPD1	68	93.827	Echinops_telfairi
ENSPKIG00000021610	snrpd1	94	91.429	ENSEBUG00000003170	snrpd1	88	91.429	Eptatretus_burgeri
ENSPKIG00000021610	snrpd1	94	95.238	ENSEASG00005002433	SNRPD1	94	95.238	Equus_asinus_asinus
ENSPKIG00000021610	snrpd1	94	95.238	ENSECAG00000014373	SNRPD1	94	95.238	Equus_caballus
ENSPKIG00000021610	snrpd1	78	95.402	ENSEEUG00000004987	SNRPD1	98	95.402	Erinaceus_europaeus
ENSPKIG00000021610	snrpd1	93	86.538	ENSELUG00000000088	snrpd1	73	97.701	Esox_lucius
ENSPKIG00000021610	snrpd1	94	95.238	ENSFCAG00000012352	SNRPD1	88	95.238	Felis_catus
ENSPKIG00000021610	snrpd1	94	95.238	ENSFALG00000002646	SNRPD1	94	95.238	Ficedula_albicollis
ENSPKIG00000021610	snrpd1	100	98.214	ENSGMOG00000015607	snrpd1	94	98.214	Gadus_morhua
ENSPKIG00000021610	snrpd1	94	95.238	ENSGALG00000041334	SNRPD1	88	95.238	Gallus_gallus
ENSPKIG00000021610	snrpd1	100	99.107	ENSGAFG00000011171	snrpd1	94	99.107	Gambusia_affinis
ENSPKIG00000021610	snrpd1	100	98.214	ENSGACG00000005201	SNRPD1	94	98.214	Gasterosteus_aculeatus
ENSPKIG00000021610	snrpd1	94	95.238	ENSGAGG00000011197	SNRPD1	88	95.238	Gopherus_agassizii
ENSPKIG00000021610	snrpd1	79	89.773	ENSGGOG00000026706	-	74	88.764	Gorilla_gorilla
ENSPKIG00000021610	snrpd1	94	95.238	ENSGGOG00000041053	SNRPD1	88	95.238	Gorilla_gorilla
ENSPKIG00000021610	snrpd1	100	99.107	ENSHBUG00000003236	snrpd1	94	99.107	Haplochromis_burtoni
ENSPKIG00000021610	snrpd1	94	95.238	ENSHGLG00000007152	SNRPD1	88	95.238	Heterocephalus_glaber_female
ENSPKIG00000021610	snrpd1	94	95.238	ENSHGLG00100008618	SNRPD1	88	95.238	Heterocephalus_glaber_male
ENSPKIG00000021610	snrpd1	100	99.107	ENSIPUG00000003576	snrpd1	94	99.107	Ictalurus_punctatus
ENSPKIG00000021610	snrpd1	94	95.238	ENSSTOG00000000485	SNRPD1	89	95.238	Ictidomys_tridecemlineatus
ENSPKIG00000021610	snrpd1	94	95.238	ENSJJAG00000017698	Snrpd1	88	95.238	Jaculus_jaculus
ENSPKIG00000021610	snrpd1	100	99.107	ENSKMAG00000005987	snrpd1	94	99.107	Kryptolebias_marmoratus
ENSPKIG00000021610	snrpd1	100	99.107	ENSLBEG00000003327	snrpd1	94	99.107	Labrus_bergylta
ENSPKIG00000021610	snrpd1	94	95.238	ENSLACG00000001955	SNRPD1	88	95.238	Latimeria_chalumnae
ENSPKIG00000021610	snrpd1	94	95.238	ENSLOCG00000002003	snrpd1	90	95.238	Lepisosteus_oculatus
ENSPKIG00000021610	snrpd1	94	95.238	ENSLAFG00000005819	SNRPD1	89	95.238	Loxodonta_africana
ENSPKIG00000021610	snrpd1	94	95.238	ENSMFAG00000042080	SNRPD1	88	95.238	Macaca_fascicularis
ENSPKIG00000021610	snrpd1	94	95.238	ENSMMUG00000003992	SNRPD1	90	95.238	Macaca_mulatta
ENSPKIG00000021610	snrpd1	94	95.238	ENSMNEG00000041296	SNRPD1	88	95.238	Macaca_nemestrina
ENSPKIG00000021610	snrpd1	94	95.238	ENSMLEG00000028659	SNRPD1	88	95.238	Mandrillus_leucophaeus
ENSPKIG00000021610	snrpd1	100	99.107	ENSMAMG00000012971	snrpd1	94	99.107	Mastacembelus_armatus
ENSPKIG00000021610	snrpd1	100	99.107	ENSMZEG00005004685	snrpd1	94	99.107	Maylandia_zebra
ENSPKIG00000021610	snrpd1	94	95.238	ENSMGAG00000011598	SNRPD1	87	95.238	Meleagris_gallopavo
ENSPKIG00000021610	snrpd1	77	81.395	ENSMAUG00000016467	-	78	80.460	Mesocricetus_auratus
ENSPKIG00000021610	snrpd1	77	81.395	ENSMAUG00000016502	-	78	80.460	Mesocricetus_auratus
ENSPKIG00000021610	snrpd1	84	90.426	ENSMAUG00000006829	-	57	95.402	Mesocricetus_auratus
ENSPKIG00000021610	snrpd1	94	95.238	ENSMICG00000044066	SNRPD1	88	95.238	Microcebus_murinus
ENSPKIG00000021610	snrpd1	94	95.238	ENSMOCG00000017367	Snrpd1	88	95.238	Microtus_ochrogaster
ENSPKIG00000021610	snrpd1	100	99.107	ENSMMOG00000019089	snrpd1	94	99.107	Mola_mola
ENSPKIG00000021610	snrpd1	94	95.238	ENSMODG00000021487	SNRPD1	91	95.238	Monodelphis_domestica
ENSPKIG00000021610	snrpd1	100	99.107	ENSMALG00000014459	snrpd1	94	99.107	Monopterus_albus
ENSPKIG00000021610	snrpd1	94	95.238	MGP_CAROLIEiJ_G0021994	Snrpd1	88	95.238	Mus_caroli
ENSPKIG00000021610	snrpd1	94	95.238	ENSMUSG00000002477	Snrpd1	88	95.238	Mus_musculus
ENSPKIG00000021610	snrpd1	94	95.238	MGP_PahariEiJ_G0018731	Snrpd1	88	95.238	Mus_pahari
ENSPKIG00000021610	snrpd1	94	95.238	MGP_SPRETEiJ_G0022910	Snrpd1	88	95.238	Mus_spretus
ENSPKIG00000021610	snrpd1	94	95.238	ENSMPUG00000005567	-	90	95.238	Mustela_putorius_furo
ENSPKIG00000021610	snrpd1	94	94.286	ENSMPUG00000020041	-	88	94.286	Mustela_putorius_furo
ENSPKIG00000021610	snrpd1	79	95.455	ENSMLUG00000009124	SNRPD1	69	94.382	Myotis_lucifugus
ENSPKIG00000021610	snrpd1	94	95.238	ENSNGAG00000023946	Snrpd1	88	95.238	Nannospalax_galili
ENSPKIG00000021610	snrpd1	78	100.000	ENSNBRG00000012119	snrpd1	72	100.000	Neolamprologus_brichardi
ENSPKIG00000021610	snrpd1	94	92.381	ENSNLEG00000031430	SNRPD1	88	92.381	Nomascus_leucogenys
ENSPKIG00000021610	snrpd1	94	95.238	ENSODEG00000005764	SNRPD1	88	95.238	Octodon_degus
ENSPKIG00000021610	snrpd1	100	99.107	ENSONIG00000002486	snrpd1	94	99.107	Oreochromis_niloticus
ENSPKIG00000021610	snrpd1	85	86.316	ENSOANG00000004638	-	80	86.316	Ornithorhynchus_anatinus
ENSPKIG00000021610	snrpd1	94	94.286	ENSOCUG00000014399	-	88	94.286	Oryctolagus_cuniculus
ENSPKIG00000021610	snrpd1	94	95.238	ENSOCUG00000023761	-	90	95.238	Oryctolagus_cuniculus
ENSPKIG00000021610	snrpd1	100	99.107	ENSORLG00000012516	snrpd1	100	99.107	Oryzias_latipes
ENSPKIG00000021610	snrpd1	100	99.107	ENSORLG00020005743	snrpd1	94	99.107	Oryzias_latipes_hni
ENSPKIG00000021610	snrpd1	100	99.107	ENSORLG00015013402	snrpd1	94	99.107	Oryzias_latipes_hsok
ENSPKIG00000021610	snrpd1	100	99.107	ENSOMEG00000011571	snrpd1	94	99.107	Oryzias_melastigma
ENSPKIG00000021610	snrpd1	94	95.238	ENSOGAG00000007833	SNRPD1	88	95.238	Otolemur_garnettii
ENSPKIG00000021610	snrpd1	79	94.382	ENSOARG00000003413	-	67	94.382	Ovis_aries
ENSPKIG00000021610	snrpd1	94	95.238	ENSPPAG00000042593	SNRPD1	88	95.238	Pan_paniscus
ENSPKIG00000021610	snrpd1	94	95.238	ENSPPRG00000002399	SNRPD1	88	95.238	Panthera_pardus
ENSPKIG00000021610	snrpd1	94	67.619	ENSPPRG00000005009	-	85	67.619	Panthera_pardus
ENSPKIG00000021610	snrpd1	94	95.238	ENSPTIG00000013206	SNRPD1	92	95.238	Panthera_tigris_altaica
ENSPKIG00000021610	snrpd1	85	88.421	ENSPTRG00000050159	-	81	88.421	Pan_troglodytes
ENSPKIG00000021610	snrpd1	94	95.238	ENSPTRG00000009909	SNRPD1	88	95.238	Pan_troglodytes
ENSPKIG00000021610	snrpd1	94	95.238	ENSPANG00000023478	SNRPD1	88	95.238	Papio_anubis
ENSPKIG00000021610	snrpd1	100	99.107	ENSPMGG00000001862	snrpd1	94	99.107	Periophthalmus_magnuspinnatus
ENSPKIG00000021610	snrpd1	94	95.238	ENSPEMG00000014773	-	88	95.238	Peromyscus_maniculatus_bairdii
ENSPKIG00000021610	snrpd1	85	82.474	ENSPMAG00000003938	-	80	82.474	Petromyzon_marinus
ENSPKIG00000021610	snrpd1	94	95.238	ENSPCIG00000020320	SNRPD1	94	95.238	Phascolarctos_cinereus
ENSPKIG00000021610	snrpd1	100	93.750	ENSPFOG00000012448	SNRPD1	94	93.750	Poecilia_formosa
ENSPKIG00000021610	snrpd1	100	93.750	ENSPLAG00000006738	snrpd1	94	93.750	Poecilia_latipinna
ENSPKIG00000021610	snrpd1	100	93.750	ENSPMEG00000021942	snrpd1	94	93.750	Poecilia_mexicana
ENSPKIG00000021610	snrpd1	100	99.107	ENSPREG00000007094	snrpd1	94	99.107	Poecilia_reticulata
ENSPKIG00000021610	snrpd1	94	95.238	ENSPPYG00000025874	SNRPD1	88	95.238	Pongo_abelii
ENSPKIG00000021610	snrpd1	94	95.238	ENSPCOG00000013327	SNRPD1	88	95.238	Propithecus_coquereli
ENSPKIG00000021610	snrpd1	94	95.238	ENSPVAG00000005511	SNRPD1	70	95.238	Pteropus_vampyrus
ENSPKIG00000021610	snrpd1	100	97.321	ENSPNAG00000017824	snrpd1	94	97.321	Pygocentrus_nattereri
ENSPKIG00000021610	snrpd1	94	95.238	ENSRNOG00000013714	Snrpd1	88	95.238	Rattus_norvegicus
ENSPKIG00000021610	snrpd1	94	95.238	ENSRBIG00000022996	SNRPD1	88	95.238	Rhinopithecus_bieti
ENSPKIG00000021610	snrpd1	94	95.238	ENSRROG00000027640	SNRPD1	88	95.238	Rhinopithecus_roxellana
ENSPKIG00000021610	snrpd1	94	95.238	ENSSBOG00000020998	SNRPD1	88	95.238	Saimiri_boliviensis_boliviensis
ENSPKIG00000021610	snrpd1	94	95.238	ENSSHAG00000011791	SNRPD1	88	95.238	Sarcophilus_harrisii
ENSPKIG00000021610	snrpd1	100	98.214	ENSSFOG00015008809	-	94	98.214	Scleropages_formosus
ENSPKIG00000021610	snrpd1	100	98.214	ENSSFOG00015022253	-	94	98.214	Scleropages_formosus
ENSPKIG00000021610	snrpd1	100	98.214	ENSSMAG00000008765	snrpd1	100	98.214	Scophthalmus_maximus
ENSPKIG00000021610	snrpd1	100	99.107	ENSSDUG00000010521	snrpd1	95	99.107	Seriola_dumerili
ENSPKIG00000021610	snrpd1	100	99.107	ENSSLDG00000011858	snrpd1	94	99.107	Seriola_lalandi_dorsalis
ENSPKIG00000021610	snrpd1	58	96.923	ENSSARG00000004271	SNRPD1	97	96.923	Sorex_araneus
ENSPKIG00000021610	snrpd1	94	95.238	ENSSPUG00000002824	SNRPD1	88	95.238	Sphenodon_punctatus
ENSPKIG00000021610	snrpd1	100	99.107	ENSSPAG00000015229	snrpd1	100	99.107	Stegastes_partitus
ENSPKIG00000021610	snrpd1	94	95.238	ENSSSCG00000003701	SNRPD1	94	95.238	Sus_scrofa
ENSPKIG00000021610	snrpd1	94	95.238	ENSTGUG00000005095	SNRPD1	88	95.238	Taeniopygia_guttata
ENSPKIG00000021610	snrpd1	100	97.321	ENSTRUG00000008977	snrpd1	100	97.321	Takifugu_rubripes
ENSPKIG00000021610	snrpd1	86	94.792	ENSTNIG00000001224	snrpd1	92	94.792	Tetraodon_nigroviridis
ENSPKIG00000021610	snrpd1	72	93.827	ENSTBEG00000013776	SNRPD1	92	93.827	Tupaia_belangeri
ENSPKIG00000021610	snrpd1	94	95.238	ENSTTRG00000002654	SNRPD1	91	95.238	Tursiops_truncatus
ENSPKIG00000021610	snrpd1	94	95.238	ENSUAMG00000013431	SNRPD1	94	95.402	Ursus_americanus
ENSPKIG00000021610	snrpd1	94	95.238	ENSUMAG00000019740	SNRPD1	88	95.238	Ursus_maritimus
ENSPKIG00000021610	snrpd1	94	95.238	ENSVPAG00000010056	SNRPD1	70	95.238	Vicugna_pacos
ENSPKIG00000021610	snrpd1	94	95.238	ENSVVUG00000004009	SNRPD1	94	95.238	Vulpes_vulpes
ENSPKIG00000021610	snrpd1	94	93.333	ENSXETG00000027354	snrpd1	88	93.333	Xenopus_tropicalis
ENSPKIG00000021610	snrpd1	100	99.107	ENSXCOG00000020108	snrpd1	94	99.107	Xiphophorus_couchianus
ENSPKIG00000021610	snrpd1	100	99.107	ENSXMAG00000003368	snrpd1	94	99.107	Xiphophorus_maculatus