EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000021727 (Gene tree)
Gene ID: 111855921
Gene Symbol: arl5c
Alias: -
Full Name: ADP-ribosylation factor-like protein 5B
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 3905 bases
Position: chrPGUA01000031.1:2995496-2999400
Accession: 111855921
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000004749	MMR_HSR1	PF01926.23	5.5e-08	1	1
ENSPKIP00000004763	MMR_HSR1	PF01926.23	5.6e-08	1	1
ENSPKIP00000004777	MMR_HSR1	PF01926.23	6.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000028765	-	1943	-	ENSPKIP00000004777	195 (aa)	-	-
ENSPKIT00000028751	-	2073	-	ENSPKIP00000004763	180 (aa)	-	-
ENSPKIT00000028737	-	1895	-	ENSPKIP00000004749	179 (aa)	XP_023691192	UPI000CD5CAA2

Gene Model

Click here to download ENSPKIG00000021727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000021727's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000021727	arl5c	80	30.137	ENSPKIG00000007615	sar1ab	74	30.137
ENSPKIG00000021727	arl5c	98	49.153	ENSPKIG00000005488	ARF1	98	50.000
ENSPKIG00000021727	arl5c	87	32.500	ENSPKIG00000005234	-	86	32.500
ENSPKIG00000021727	arl5c	96	40.462	ENSPKIG00000017974	-	95	40.462
ENSPKIG00000021727	arl5c	64	30.579	ENSPKIG00000001765	rab33a	51	30.579
ENSPKIG00000021727	arl5c	98	48.023	ENSPKIG00000025204	-	98	48.023
ENSPKIG00000021727	arl5c	96	41.040	ENSPKIG00000012886	arl3	94	41.358
ENSPKIG00000021727	arl5c	98	48.588	ENSPKIG00000004758	-	98	48.588
ENSPKIG00000021727	arl5c	98	43.503	ENSPKIG00000025349	arf4a	98	43.503
ENSPKIG00000021727	arl5c	92	76.829	ENSPKIG00000011377	ARL5B	85	76.829
ENSPKIG00000021727	arl5c	97	37.430	ENSPKIG00000021369	arl6	96	36.872
ENSPKIG00000021727	arl5c	96	45.665	ENSPKIG00000007118	arl1	96	45.665
ENSPKIG00000021727	arl5c	99	39.326	ENSPKIG00000024946	arl2	97	39.326
ENSPKIG00000021727	arl5c	73	30.534	ENSPKIG00000017353	-	66	30.534
ENSPKIG00000021727	arl5c	98	71.023	ENSPKIG00000020706	arl5a	98	71.023
ENSPKIG00000021727	arl5c	69	32.558	ENSPKIG00000016213	-	63	32.558
ENSPKIG00000021727	arl5c	89	41.463	ENSPKIG00000011618	arl4aa	88	40.230
ENSPKIG00000021727	arl5c	62	30.172	ENSPKIG00000005686	-	55	30.172
ENSPKIG00000021727	arl5c	96	46.821	ENSPKIG00000013814	-	96	46.821
ENSPKIG00000021727	arl5c	87	30.000	ENSPKIG00000025083	arl8ba	84	30.000
ENSPKIG00000021727	arl5c	91	38.372	ENSPKIG00000006104	arfrp1	83	38.372
ENSPKIG00000021727	arl5c	68	30.827	ENSPKIG00000013084	rab33ba	57	30.827
ENSPKIG00000021727	arl5c	69	31.783	ENSPKIG00000025079	rab35b	63	31.783
ENSPKIG00000021727	arl5c	62	31.897	ENSPKIG00000018888	si:dkey-16l2.16	55	31.897
ENSPKIG00000021727	arl5c	96	45.087	ENSPKIG00000025381	-	96	45.087
ENSPKIG00000021727	arl5c	87	40.741	ENSPKIG00000008422	ARL4C	88	40.476
ENSPKIG00000021727	arl5c	95	40.000	ENSPKIG00000010744	arl4ab	79	40.000
ENSPKIG00000021727	arl5c	98	49.153	ENSPKIG00000018781	-	98	49.153
ENSPKIG00000021727	arl5c	98	48.023	ENSPKIG00000007437	-	98	48.023
ENSPKIG00000021727	arl5c	89	41.212	ENSPKIG00000001594	arl4d	89	38.764
ENSPKIG00000021727	arl5c	89	40.361	ENSPKIG00000020450	arl4cb	88	39.286
ENSPKIG00000021727	arl5c	87	33.125	ENSPKIG00000005327	arl8a	84	33.125
ENSPKIG00000021727	arl5c	89	41.509	ENSPKIG00000019284	arl3l1	86	41.509
ENSPKIG00000021727	arl5c	83	30.000	ENSPKIG00000019809	arl8bb	54	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000021727	arl5c	100	83.240	ENSAPOG00000005821	arl5c	100	83.240	Acanthochromis_polyacanthus
ENSPKIG00000021727	arl5c	99	84.916	ENSACIG00000008975	arl5c	99	84.916	Amphilophus_citrinellus
ENSPKIG00000021727	arl5c	100	84.358	ENSAOCG00000010448	arl5c	100	84.358	Amphiprion_ocellaris
ENSPKIG00000021727	arl5c	100	84.358	ENSAPEG00000002699	arl5c	100	84.358	Amphiprion_percula
ENSPKIG00000021727	arl5c	100	83.240	ENSATEG00000000181	arl5c	100	83.240	Anabas_testudineus
ENSPKIG00000021727	arl5c	100	86.592	ENSACLG00000000922	arl5c	100	87.195	Astatotilapia_calliptera
ENSPKIG00000021727	arl5c	100	86.592	ENSAMXG00000031771	arl5c	100	86.592	Astyanax_mexicanus
ENSPKIG00000021727	arl5c	100	82.682	ENSCSEG00000009845	arl5c	100	82.682	Cynoglossus_semilaevis
ENSPKIG00000021727	arl5c	99	84.270	ENSCVAG00000012706	arl5c	99	84.270	Cyprinodon_variegatus
ENSPKIG00000021727	arl5c	100	86.592	ENSDARG00000035719	arl5c	100	86.592	Danio_rerio
ENSPKIG00000021727	arl5c	100	92.737	ENSELUG00000016864	arl5c	100	92.737	Esox_lucius
ENSPKIG00000021727	arl5c	100	84.358	ENSFHEG00000013677	arl5c	100	84.358	Fundulus_heteroclitus
ENSPKIG00000021727	arl5c	99	84.831	ENSGAFG00000002547	arl5c	99	84.831	Gambusia_affinis
ENSPKIG00000021727	arl5c	99	88.764	ENSGACG00000009321	arl5c	99	88.764	Gasterosteus_aculeatus
ENSPKIG00000021727	arl5c	100	86.592	ENSHBUG00000007301	arl5c	100	86.592	Haplochromis_burtoni
ENSPKIG00000021727	arl5c	100	78.212	ENSHCOG00000017576	-	100	78.212	Hippocampus_comes
ENSPKIG00000021727	arl5c	100	88.268	ENSIPUG00000023232	arl5c	100	88.268	Ictalurus_punctatus
ENSPKIG00000021727	arl5c	100	84.916	ENSKMAG00000011323	arl5c	100	84.916	Kryptolebias_marmoratus
ENSPKIG00000021727	arl5c	100	82.682	ENSLBEG00000006177	arl5c	86	82.682	Labrus_bergylta
ENSPKIG00000021727	arl5c	100	84.358	ENSMAMG00000022157	arl5c	100	84.358	Mastacembelus_armatus
ENSPKIG00000021727	arl5c	100	86.592	ENSMZEG00005022925	arl5c	100	86.592	Maylandia_zebra
ENSPKIG00000021727	arl5c	92	90.244	ENSMMOG00000020851	arl5c	97	90.303	Mola_mola
ENSPKIG00000021727	arl5c	99	79.775	ENSMALG00000009306	arl5c	99	79.775	Monopterus_albus
ENSPKIG00000021727	arl5c	100	86.592	ENSNBRG00000020245	arl5c	100	87.195	Neolamprologus_brichardi
ENSPKIG00000021727	arl5c	100	86.034	ENSONIG00000000890	arl5c	99	86.034	Oreochromis_niloticus
ENSPKIG00000021727	arl5c	100	79.330	ENSORLG00000002960	arl5c	100	81.098	Oryzias_latipes
ENSPKIG00000021727	arl5c	100	79.330	ENSORLG00020010074	arl5c	100	81.098	Oryzias_latipes_hni
ENSPKIG00000021727	arl5c	100	79.330	ENSORLG00015002752	arl5c	100	81.098	Oryzias_latipes_hsok
ENSPKIG00000021727	arl5c	97	81.503	ENSOMEG00000021718	arl5c	98	81.503	Oryzias_melastigma
ENSPKIG00000021727	arl5c	100	84.916	ENSPFOG00000007842	arl5c	99	84.916	Poecilia_formosa
ENSPKIG00000021727	arl5c	100	84.358	ENSPLAG00000002394	arl5c	100	84.358	Poecilia_latipinna
ENSPKIG00000021727	arl5c	94	85.207	ENSPMEG00000000631	arl5c	98	85.207	Poecilia_mexicana
ENSPKIG00000021727	arl5c	100	85.475	ENSPREG00000008730	arl5c	100	85.475	Poecilia_reticulata
ENSPKIG00000021727	arl5c	100	86.592	ENSPNYG00000012720	arl5c	100	87.195	Pundamilia_nyererei
ENSPKIG00000021727	arl5c	100	88.268	ENSPNAG00000002310	arl5c	100	88.268	Pygocentrus_nattereri
ENSPKIG00000021727	arl5c	100	93.296	ENSSFOG00015023529	arl5c	100	93.296	Scleropages_formosus
ENSPKIG00000021727	arl5c	100	84.916	ENSSMAG00000010552	arl5c	100	84.916	Scophthalmus_maximus
ENSPKIG00000021727	arl5c	100	83.799	ENSSDUG00000022640	arl5c	100	83.799	Seriola_dumerili
ENSPKIG00000021727	arl5c	100	83.799	ENSSLDG00000000728	arl5c	100	83.799	Seriola_lalandi_dorsalis
ENSPKIG00000021727	arl5c	100	83.240	ENSSPAG00000007687	arl5c	100	83.240	Stegastes_partitus
ENSPKIG00000021727	arl5c	100	84.358	ENSTRUG00000022814	arl5c	100	84.358	Takifugu_rubripes
ENSPKIG00000021727	arl5c	100	82.123	ENSTNIG00000003015	arl5c	99	82.123	Tetraodon_nigroviridis
ENSPKIG00000021727	arl5c	99	84.831	ENSXCOG00000017380	arl5c	99	84.831	Xiphophorus_couchianus
ENSPKIG00000021727	arl5c	99	84.270	ENSXMAG00000008447	arl5c	99	84.270	Xiphophorus_maculatus