EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000021736 (Gene tree)
Gene ID: 111842132
Gene Symbol: mrps18c
Alias: -
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 2037 bases
Position: chrPGUA01000010.1:3223966-3226002
Accession: 111842132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000004768	Ribosomal_S18	PF01084.20	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000028756	-	1338	-	ENSPKIP00000004768	137 (aa)	XP_023664219	UPI000CD65F88

Gene Model

Click here to download ENSPKIG00000021736's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000021736's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000021736	mrps18c	82	69.912	ENSAPOG00000019045	mrps18c	86	69.912	Acanthochromis_polyacanthus
ENSPKIG00000021736	mrps18c	65	75.281	ENSACIG00000020253	mrps18c	88	75.281	Amphilophus_citrinellus
ENSPKIG00000021736	mrps18c	100	57.664	ENSAOCG00000014338	mrps18c	100	57.664	Amphiprion_ocellaris
ENSPKIG00000021736	mrps18c	75	70.874	ENSAPEG00000022956	mrps18c	80	70.874	Amphiprion_percula
ENSPKIG00000021736	mrps18c	64	78.161	ENSAPEG00000023068	-	85	76.667	Amphiprion_percula
ENSPKIG00000021736	mrps18c	100	55.474	ENSATEG00000023417	mrps18c	100	55.474	Anabas_testudineus
ENSPKIG00000021736	mrps18c	66	65.556	ENSAPLG00000012544	-	87	65.556	Anas_platyrhynchos
ENSPKIG00000021736	mrps18c	83	64.754	ENSACLG00000010521	mrps18c	89	78.022	Astatotilapia_calliptera
ENSPKIG00000021736	mrps18c	67	80.435	ENSAMXG00000012238	mrps18c	93	80.435	Astyanax_mexicanus
ENSPKIG00000021736	mrps18c	77	63.208	ENSCPBG00000007783	-	65	63.208	Chrysemys_picta_bellii
ENSPKIG00000021736	mrps18c	95	53.077	ENSCSEG00000000711	mrps18c	92	53.077	Cynoglossus_semilaevis
ENSPKIG00000021736	mrps18c	100	56.204	ENSCVAG00000020169	mrps18c	100	56.204	Cyprinodon_variegatus
ENSPKIG00000021736	mrps18c	100	61.314	ENSDARG00000069624	mrps18c	100	61.314	Danio_rerio
ENSPKIG00000021736	mrps18c	100	61.314	ENSELUG00000024603	mrps18c	100	61.314	Esox_lucius
ENSPKIG00000021736	mrps18c	75	66.019	ENSFHEG00000015550	mrps18c	76	66.019	Fundulus_heteroclitus
ENSPKIG00000021736	mrps18c	75	66.019	ENSFHEG00000018752	-	80	66.019	Fundulus_heteroclitus
ENSPKIG00000021736	mrps18c	71	65.979	ENSGALG00000023191	MRPS18C	67	65.979	Gallus_gallus
ENSPKIG00000021736	mrps18c	75	70.874	ENSGAFG00000008048	mrps18c	66	70.874	Gambusia_affinis
ENSPKIG00000021736	mrps18c	80	64.220	ENSGAGG00000015144	-	76	64.220	Gopherus_agassizii
ENSPKIG00000021736	mrps18c	100	61.314	ENSHBUG00000002008	mrps18c	100	61.314	Haplochromis_burtoni
ENSPKIG00000021736	mrps18c	66	79.121	ENSHCOG00000013161	mrps18c	69	79.121	Hippocampus_comes
ENSPKIG00000021736	mrps18c	67	80.435	ENSIPUG00000003783	mrps18c	89	80.435	Ictalurus_punctatus
ENSPKIG00000021736	mrps18c	79	67.241	ENSKMAG00000016467	mrps18c	91	67.241	Kryptolebias_marmoratus
ENSPKIG00000021736	mrps18c	100	61.314	ENSLBEG00000021861	mrps18c	100	61.314	Labrus_bergylta
ENSPKIG00000021736	mrps18c	100	61.314	ENSLBEG00000019174	mrps18c	100	61.314	Labrus_bergylta
ENSPKIG00000021736	mrps18c	90	62.500	ENSLACG00000011243	mrps18c	99	62.500	Latimeria_chalumnae
ENSPKIG00000021736	mrps18c	100	63.504	ENSLOCG00000012115	mrps18c	100	63.504	Lepisosteus_oculatus
ENSPKIG00000021736	mrps18c	100	57.143	ENSMAMG00000012386	mrps18c	100	57.143	Mastacembelus_armatus
ENSPKIG00000021736	mrps18c	100	61.314	ENSMZEG00005023278	mrps18c	100	61.314	Maylandia_zebra
ENSPKIG00000021736	mrps18c	66	76.923	ENSMMOG00000011316	mrps18c	69	76.923	Mola_mola
ENSPKIG00000021736	mrps18c	100	61.314	ENSNBRG00000006182	mrps18c	100	61.314	Neolamprologus_brichardi
ENSPKIG00000021736	mrps18c	66	71.111	ENSMEUG00000010972	-	71	71.111	Notamacropus_eugenii
ENSPKIG00000021736	mrps18c	100	61.314	ENSONIG00000012527	mrps18c	96	74.227	Oreochromis_niloticus
ENSPKIG00000021736	mrps18c	100	56.204	ENSORLG00015006869	mrps18c	100	56.204	Oryzias_latipes_hsok
ENSPKIG00000021736	mrps18c	66	74.444	ENSOMEG00000005009	mrps18c	87	74.444	Oryzias_melastigma
ENSPKIG00000021736	mrps18c	66	74.444	ENSPMGG00000002991	mrps18c	91	74.444	Periophthalmus_magnuspinnatus
ENSPKIG00000021736	mrps18c	75	68.932	ENSPFOG00000002351	mrps18c	66	68.932	Poecilia_formosa
ENSPKIG00000021736	mrps18c	75	68.932	ENSPLAG00000015187	mrps18c	80	68.932	Poecilia_latipinna
ENSPKIG00000021736	mrps18c	75	68.932	ENSPMEG00000014488	mrps18c	66	68.932	Poecilia_mexicana
ENSPKIG00000021736	mrps18c	61	77.108	ENSPREG00000012593	mrps18c	85	77.108	Poecilia_reticulata
ENSPKIG00000021736	mrps18c	100	60.584	ENSPNYG00000010654	mrps18c	100	60.584	Pundamilia_nyererei
ENSPKIG00000021736	mrps18c	99	56.522	ENSPNAG00000009350	mrps18c	87	74.194	Pygocentrus_nattereri
ENSPKIG00000021736	mrps18c	100	72.263	ENSSFOG00015019444	mrps18c	100	72.263	Scleropages_formosus
ENSPKIG00000021736	mrps18c	100	57.664	ENSSDUG00000015676	mrps18c	100	57.664	Seriola_dumerili
ENSPKIG00000021736	mrps18c	79	64.407	ENSSLDG00000002034	mrps18c	91	64.407	Seriola_lalandi_dorsalis
ENSPKIG00000021736	mrps18c	78	60.748	ENSSPUG00000013990	-	77	60.748	Sphenodon_punctatus
ENSPKIG00000021736	mrps18c	99	58.088	ENSSPAG00000008687	mrps18c	99	58.088	Stegastes_partitus
ENSPKIG00000021736	mrps18c	73	66.000	ENSTRUG00000024403	mrps18c	77	66.000	Takifugu_rubripes
ENSPKIG00000021736	mrps18c	74	67.647	ENSTNIG00000005674	mrps18c	78	67.647	Tetraodon_nigroviridis
ENSPKIG00000021736	mrps18c	83	62.810	ENSXETG00000027597	mrps18c	91	62.810	Xenopus_tropicalis
ENSPKIG00000021736	mrps18c	65	76.404	ENSXCOG00000016208	mrps18c	89	76.404	Xiphophorus_couchianus
ENSPKIG00000021736	mrps18c	100	58.571	ENSXMAG00000012555	mrps18c	83	58.571	Xiphophorus_maculatus