EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000021876 (Gene tree)
Gene ID: 111832700
Gene Symbol: chd9
Alias: -
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 68999 bases
Position: chrPGUA01000043.1:2005770-2074768
Accession: ZDB-GENE-030131-497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000005464	ResIII	PF04851.15	3.6e-06	1	1
ENSPKIP00000005330	ResIII	PF04851.15	4.5e-06	1	1
ENSPKIP00000005169	ResIII	PF04851.15	4.8e-06	1	1
ENSPKIP00000005248	ResIII	PF04851.15	4.8e-06	1	1
ENSPKIP00000005445	ResIII	PF04851.15	4.8e-06	1	1
ENSPKIP00000005464	BRK	PF07533.16	1.3e-31	1	2
ENSPKIP00000005464	BRK	PF07533.16	1.3e-31	2	2
ENSPKIP00000005330	BRK	PF07533.16	1.7e-31	1	2
ENSPKIP00000005330	BRK	PF07533.16	1.7e-31	2	2
ENSPKIP00000005445	BRK	PF07533.16	1.8e-31	1	2
ENSPKIP00000005445	BRK	PF07533.16	1.8e-31	2	2
ENSPKIP00000005169	BRK	PF07533.16	1.9e-31	1	2
ENSPKIP00000005169	BRK	PF07533.16	1.9e-31	2	2
ENSPKIP00000005248	BRK	PF07533.16	1.9e-31	1	2
ENSPKIP00000005248	BRK	PF07533.16	1.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000029326	-	13104	-	ENSPKIP00000005330	2727 (aa)	-	-
ENSPKIT00000029469	-	11718	-	ENSPKIP00000005464	2430 (aa)	-	-
ENSPKIT00000029162	-	13289	-	ENSPKIP00000005169	2838 (aa)	-	-
ENSPKIT00000029450	-	8535	-	ENSPKIP00000005445	2844 (aa)	-	-
ENSPKIT00000029242	-	13180	-	ENSPKIP00000005248	2838 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000021876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000021876's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000021876	chd9	75	64.972	ENSPKIG00000005578	chd6	72	64.954
ENSPKIG00000021876	chd9	98	73.506	ENSPKIG00000025401	-	72	70.512
ENSPKIG00000021876	chd9	90	56.468	ENSPKIG00000009637	chd7	66	66.344

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000021876	chd9	69	76.859	ENSG00000177200	CHD9	91	76.415	Homo_sapiens
ENSPKIG00000021876	chd9	99	78.025	ENSAPOG00000023034	chd9	96	78.212	Acanthochromis_polyacanthus
ENSPKIG00000021876	chd9	68	77.240	ENSAMEG00000016232	CHD9	97	63.309	Ailuropoda_melanoleuca
ENSPKIG00000021876	chd9	94	75.373	ENSACIG00000004097	chd9	95	66.341	Amphilophus_citrinellus
ENSPKIG00000021876	chd9	99	77.769	ENSAOCG00000005487	chd9	96	78.485	Amphiprion_ocellaris
ENSPKIG00000021876	chd9	99	77.648	ENSAPEG00000009859	chd9	96	78.360	Amphiprion_percula
ENSPKIG00000021876	chd9	99	77.715	ENSATEG00000002748	chd9	96	68.917	Anabas_testudineus
ENSPKIG00000021876	chd9	99	71.068	ENSAPLG00000002826	CHD9	74	65.702	Anas_platyrhynchos
ENSPKIG00000021876	chd9	68	76.919	ENSACAG00000016150	CHD9	93	70.936	Anolis_carolinensis
ENSPKIG00000021876	chd9	68	76.464	ENSANAG00000015630	CHD9	90	73.022	Aotus_nancymaae
ENSPKIG00000021876	chd9	95	77.811	ENSACLG00000016899	chd9	96	68.579	Astatotilapia_calliptera
ENSPKIG00000021876	chd9	99	76.717	ENSAMXG00000005652	chd9	96	77.530	Astyanax_mexicanus
ENSPKIG00000021876	chd9	68	77.001	ENSBTAG00000002287	CHD9	97	63.050	Bos_taurus
ENSPKIG00000021876	chd9	68	76.523	ENSCJAG00000001573	CHD9	90	73.022	Callithrix_jacchus
ENSPKIG00000021876	chd9	68	77.061	ENSCAFG00000009699	CHD9	97	62.891	Canis_familiaris
ENSPKIG00000021876	chd9	68	77.061	ENSCAFG00020002879	CHD9	90	73.214	Canis_lupus_dingo
ENSPKIG00000021876	chd9	99	67.535	ENSCHIG00000021000	CHD9	74	64.073	Capra_hircus
ENSPKIG00000021876	chd9	68	76.762	ENSTSYG00000007693	CHD9	90	72.857	Carlito_syrichta
ENSPKIG00000021876	chd9	70	65.873	ENSCAPG00000011604	CHD9	75	62.986	Cavia_aperea
ENSPKIG00000021876	chd9	68	72.060	ENSCPOG00000036544	CHD9	97	59.923	Cavia_porcellus
ENSPKIG00000021876	chd9	68	76.284	ENSCCAG00000036178	CHD9	90	72.302	Cebus_capucinus
ENSPKIG00000021876	chd9	68	76.675	ENSCATG00000036753	CHD9	90	72.662	Cercocebus_atys
ENSPKIG00000021876	chd9	68	76.369	ENSCLAG00000007137	CHD9	99	81.272	Chinchilla_lanigera
ENSPKIG00000021876	chd9	68	76.615	ENSCSAG00000005311	CHD9	97	62.651	Chlorocebus_sabaeus
ENSPKIG00000021876	chd9	68	92.969	ENSCHOG00000003935	CHD9	69	92.969	Choloepus_hoffmanni
ENSPKIG00000021876	chd9	89	83.772	ENSCPBG00000012459	CHD9	95	82.258	Chrysemys_picta_bellii
ENSPKIG00000021876	chd9	68	76.615	ENSCANG00000030349	CHD9	90	72.662	Colobus_angolensis_palliatus
ENSPKIG00000021876	chd9	98	69.935	ENSCGRG00001016150	Chd9	97	62.548	Cricetulus_griseus_chok1gshd
ENSPKIG00000021876	chd9	98	69.935	ENSCGRG00000012850	Chd9	99	80.694	Cricetulus_griseus_crigri
ENSPKIG00000021876	chd9	96	75.629	ENSCSEG00000009209	chd9	95	74.499	Cynoglossus_semilaevis
ENSPKIG00000021876	chd9	94	78.868	ENSCVAG00000016195	chd9	95	76.020	Cyprinodon_variegatus
ENSPKIG00000021876	chd9	99	75.719	ENSDARG00000074498	chd9	98	75.793	Danio_rerio
ENSPKIG00000021876	chd9	65	78.105	ENSDNOG00000006045	CHD9	96	71.304	Dasypus_novemcinctus
ENSPKIG00000021876	chd9	51	79.904	ENSDORG00000008523	-	95	71.803	Dipodomys_ordii
ENSPKIG00000021876	chd9	67	93.651	ENSETEG00000009565	CHD9	88	93.651	Echinops_telfairi
ENSPKIG00000021876	chd9	95	74.731	ENSEASG00005014832	CHD9	94	81.912	Equus_asinus_asinus
ENSPKIG00000021876	chd9	68	76.941	ENSECAG00000011505	CHD9	97	62.894	Equus_caballus
ENSPKIG00000021876	chd9	72	88.444	ENSEEUG00000014515	CHD9	84	89.286	Erinaceus_europaeus
ENSPKIG00000021876	chd9	89	78.193	ENSELUG00000006031	chd9	97	76.860	Esox_lucius
ENSPKIG00000021876	chd9	68	77.061	ENSFCAG00000022534	CHD9	90	72.857	Felis_catus
ENSPKIG00000021876	chd9	99	70.538	ENSFALG00000013276	CHD9	68	77.685	Ficedula_albicollis
ENSPKIG00000021876	chd9	68	76.643	ENSFDAG00000021037	CHD9	97	62.783	Fukomys_damarensis
ENSPKIG00000021876	chd9	96	78.390	ENSFHEG00000006068	chd9	95	77.782	Fundulus_heteroclitus
ENSPKIG00000021876	chd9	79	83.299	ENSGMOG00000006040	chd9	81	83.085	Gadus_morhua
ENSPKIG00000021876	chd9	69	77.448	ENSGALG00000039178	CHD9	99	63.108	Gallus_gallus
ENSPKIG00000021876	chd9	96	78.699	ENSGAFG00000010014	chd9	97	77.321	Gambusia_affinis
ENSPKIG00000021876	chd9	94	75.865	ENSGACG00000016694	chd9	93	81.299	Gasterosteus_aculeatus
ENSPKIG00000021876	chd9	68	76.734	ENSGGOG00000014816	CHD9	90	73.022	Gorilla_gorilla
ENSPKIG00000021876	chd9	96	77.805	ENSHBUG00000023322	chd9	95	77.295	Haplochromis_burtoni
ENSPKIG00000021876	chd9	68	76.615	ENSHGLG00000014938	CHD9	99	81.272	Heterocephalus_glaber_female
ENSPKIG00000021876	chd9	96	74.969	ENSHCOG00000000937	chd9	96	74.595	Hippocampus_comes
ENSPKIG00000021876	chd9	99	76.841	ENSIPUG00000016448	chd9	96	77.303	Ictalurus_punctatus
ENSPKIG00000021876	chd9	68	76.776	ENSSTOG00000022273	CHD9	99	81.546	Ictidomys_tridecemlineatus
ENSPKIG00000021876	chd9	51	80.369	ENSJJAG00000015741	-	95	71.825	Jaculus_jaculus
ENSPKIG00000021876	chd9	96	77.718	ENSKMAG00000016784	chd9	97	76.926	Kryptolebias_marmoratus
ENSPKIG00000021876	chd9	96	78.049	ENSLBEG00000012077	chd9	95	76.779	Labrus_bergylta
ENSPKIG00000021876	chd9	98	66.775	ENSLACG00000005557	CHD9	97	59.269	Latimeria_chalumnae
ENSPKIG00000021876	chd9	98	79.689	ENSLOCG00000007225	chd9	99	78.519	Lepisosteus_oculatus
ENSPKIG00000021876	chd9	68	76.390	ENSLAFG00000015374	CHD9	97	62.530	Loxodonta_africana
ENSPKIG00000021876	chd9	68	76.675	ENSMFAG00000041354	CHD9	94	71.360	Macaca_fascicularis
ENSPKIG00000021876	chd9	68	76.675	ENSMMUG00000016310	CHD9	90	72.662	Macaca_mulatta
ENSPKIG00000021876	chd9	68	76.615	ENSMNEG00000031494	CHD9	100	64.278	Macaca_nemestrina
ENSPKIG00000021876	chd9	68	76.675	ENSMLEG00000043219	CHD9	90	72.662	Mandrillus_leucophaeus
ENSPKIG00000021876	chd9	96	78.295	ENSMAMG00000003909	chd9	96	75.133	Mastacembelus_armatus
ENSPKIG00000021876	chd9	96	78.504	ENSMZEG00005006581	chd9	95	77.699	Maylandia_zebra
ENSPKIG00000021876	chd9	99	66.157	ENSMGAG00000004642	CHD9	72	63.314	Meleagris_gallopavo
ENSPKIG00000021876	chd9	68	76.882	ENSMICG00000016679	CHD9	90	73.214	Microcebus_murinus
ENSPKIG00000021876	chd9	97	74.410	ENSMMOG00000016406	chd9	95	74.025	Mola_mola
ENSPKIG00000021876	chd9	86	66.137	ENSMODG00000013142	-	94	80.247	Monodelphis_domestica
ENSPKIG00000021876	chd9	94	77.205	ENSMALG00000013306	chd9	96	67.036	Monopterus_albus
ENSPKIG00000021876	chd9	68	75.940	MGP_CAROLIEiJ_G0031364	Chd9	97	62.439	Mus_caroli
ENSPKIG00000021876	chd9	99	69.302	ENSMUSG00000056608	Chd9	99	80.578	Mus_musculus
ENSPKIG00000021876	chd9	96	63.959	MGP_PahariEiJ_G0022964	Chd9	95	61.530	Mus_pahari
ENSPKIG00000021876	chd9	68	75.642	MGP_SPRETEiJ_G0032483	Chd9	95	62.549	Mus_spretus
ENSPKIG00000021876	chd9	68	77.180	ENSMPUG00000003285	CHD9	97	63.173	Mustela_putorius_furo
ENSPKIG00000021876	chd9	68	77.121	ENSMLUG00000004456	CHD9	97	62.734	Myotis_lucifugus
ENSPKIG00000021876	chd9	96	79.050	ENSNBRG00000009423	chd9	95	78.294	Neolamprologus_brichardi
ENSPKIG00000021876	chd9	68	76.675	ENSNLEG00000001026	CHD9	100	64.200	Nomascus_leucogenys
ENSPKIG00000021876	chd9	73	97.727	ENSMEUG00000008222	-	77	95.455	Notamacropus_eugenii
ENSPKIG00000021876	chd9	68	97.727	ENSOPRG00000011168	CHD9	80	89.744	Ochotona_princeps
ENSPKIG00000021876	chd9	68	76.478	ENSODEG00000004466	CHD9	97	62.630	Octodon_degus
ENSPKIG00000021876	chd9	97	77.374	ENSONIG00000002816	chd9	95	77.982	Oreochromis_niloticus
ENSPKIG00000021876	chd9	71	77.724	ENSOANG00000013401	CHD9	94	64.293	Ornithorhynchus_anatinus
ENSPKIG00000021876	chd9	69	76.946	ENSOCUG00000001016	CHD9	95	70.814	Oryctolagus_cuniculus
ENSPKIG00000021876	chd9	96	76.933	ENSORLG00000013810	chd9	97	74.437	Oryzias_latipes
ENSPKIG00000021876	chd9	96	75.179	ENSORLG00020020665	chd9	96	66.783	Oryzias_latipes_hni
ENSPKIG00000021876	chd9	96	77.050	ENSORLG00015019126	chd9	96	76.367	Oryzias_latipes_hsok
ENSPKIG00000021876	chd9	56	82.941	ENSOMEG00000015978	chd9	99	68.312	Oryzias_melastigma
ENSPKIG00000021876	chd9	67	77.367	ENSOGAG00000002110	CHD9	97	62.734	Otolemur_garnettii
ENSPKIG00000021876	chd9	68	76.744	ENSOARG00000017664	CHD9	97	62.569	Ovis_aries
ENSPKIG00000021876	chd9	66	77.805	ENSPPAG00000039388	-	93	71.871	Pan_paniscus
ENSPKIG00000021876	chd9	68	77.107	ENSPPRG00000004801	CHD9	90	72.857	Panthera_pardus
ENSPKIG00000021876	chd9	68	75.329	ENSPTIG00000021854	CHD9	97	62.114	Panthera_tigris_altaica
ENSPKIG00000021876	chd9	68	76.675	ENSPTRG00000008113	CHD9	90	73.022	Pan_troglodytes
ENSPKIG00000021876	chd9	69	76.859	ENSPANG00000019307	CHD9	96	71.078	Papio_anubis
ENSPKIG00000021876	chd9	57	78.096	ENSPSIG00000008099	CHD9	99	64.609	Pelodiscus_sinensis
ENSPKIG00000021876	chd9	69	55.876	ENSPMAG00000006035	-	70	67.774	Petromyzon_marinus
ENSPKIG00000021876	chd9	82	76.660	ENSPCIG00000017215	CHD9	95	76.606	Phascolarctos_cinereus
ENSPKIG00000021876	chd9	96	78.428	ENSPFOG00000015839	chd9	96	68.466	Poecilia_formosa
ENSPKIG00000021876	chd9	96	78.619	ENSPLAG00000011118	chd9	97	76.841	Poecilia_latipinna
ENSPKIG00000021876	chd9	96	76.734	ENSPMEG00000015106	chd9	96	67.545	Poecilia_mexicana
ENSPKIG00000021876	chd9	96	78.792	ENSPREG00000006473	chd9	97	77.353	Poecilia_reticulata
ENSPKIG00000021876	chd9	68	76.675	ENSPPYG00000007348	CHD9	97	62.839	Pongo_abelii
ENSPKIG00000021876	chd9	76	80.234	ENSPCAG00000007564	CHD9	86	81.760	Procavia_capensis
ENSPKIG00000021876	chd9	96	62.746	ENSPCOG00000028433	CHD9	90	72.500	Propithecus_coquereli
ENSPKIG00000021876	chd9	78	73.680	ENSPVAG00000015617	CHD9	94	59.768	Pteropus_vampyrus
ENSPKIG00000021876	chd9	96	77.906	ENSPNYG00000010947	chd9	95	77.192	Pundamilia_nyererei
ENSPKIG00000021876	chd9	99	76.992	ENSPNAG00000024141	chd9	96	77.936	Pygocentrus_nattereri
ENSPKIG00000021876	chd9	68	73.242	ENSRNOG00000049302	Chd9	100	64.170	Rattus_norvegicus
ENSPKIG00000021876	chd9	68	76.541	ENSRBIG00000035553	CHD9	96	70.951	Rhinopithecus_bieti
ENSPKIG00000021876	chd9	66	78.425	ENSRROG00000033278	CHD9	95	71.576	Rhinopithecus_roxellana
ENSPKIG00000021876	chd9	68	76.523	ENSSBOG00000030240	CHD9	90	73.022	Saimiri_boliviensis_boliviensis
ENSPKIG00000021876	chd9	68	76.932	ENSSHAG00000002719	CHD9	97	62.734	Sarcophilus_harrisii
ENSPKIG00000021876	chd9	99	76.769	ENSSFOG00015001327	chd9	95	78.016	Scleropages_formosus
ENSPKIG00000021876	chd9	99	84.361	ENSSFOG00015020209	chd9	99	83.416	Scleropages_formosus
ENSPKIG00000021876	chd9	96	78.186	ENSSMAG00000008953	chd9	97	77.134	Scophthalmus_maximus
ENSPKIG00000021876	chd9	96	79.808	ENSSDUG00000006139	chd9	97	78.230	Seriola_dumerili
ENSPKIG00000021876	chd9	96	79.287	ENSSLDG00000017818	chd9	97	77.728	Seriola_lalandi_dorsalis
ENSPKIG00000021876	chd9	73	80.255	ENSSARG00000010632	CHD9	70	80.375	Sorex_araneus
ENSPKIG00000021876	chd9	99	77.635	ENSSPAG00000021649	chd9	96	78.798	Stegastes_partitus
ENSPKIG00000021876	chd9	98	68.400	ENSSSCG00000033591	CHD9	74	64.495	Sus_scrofa
ENSPKIG00000021876	chd9	69	77.243	ENSTGUG00000007476	CHD9	100	64.328	Taeniopygia_guttata
ENSPKIG00000021876	chd9	69	81.231	ENSTRUG00000009125	chd9	96	67.823	Takifugu_rubripes
ENSPKIG00000021876	chd9	56	97.661	ENSTNIG00000003825	chd9	84	97.661	Tetraodon_nigroviridis
ENSPKIG00000021876	chd9	61	94.915	ENSTBEG00000016052	-	62	94.915	Tupaia_belangeri
ENSPKIG00000021876	chd9	81	78.514	ENSTTRG00000012674	CHD9	90	63.225	Tursiops_truncatus
ENSPKIG00000021876	chd9	77	87.895	ENSUMAG00000004043	CHD9	94	87.895	Ursus_maritimus
ENSPKIG00000021876	chd9	73	77.437	ENSVPAG00000001374	CHD9	94	70.179	Vicugna_pacos
ENSPKIG00000021876	chd9	68	77.001	ENSVVUG00000019435	CHD9	97	62.856	Vulpes_vulpes
ENSPKIG00000021876	chd9	98	68.243	ENSXETG00000000349	chd9	96	67.178	Xenopus_tropicalis
ENSPKIG00000021876	chd9	96	77.861	ENSXCOG00000012997	chd9	97	76.521	Xiphophorus_couchianus
ENSPKIG00000021876	chd9	96	78.228	ENSXMAG00000016192	chd9	97	77.020	Xiphophorus_maculatus