EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000021973 (Gene tree)
Gene ID: 111840006
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 63469 bases
Position: chrPGUA01000075.1:1226718-1290186
Accession: 111840006
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000005196	S1	PF00575.23	6.6e-11	1	1
ENSPKIP00000005234	S1	PF00575.23	6.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000029190	-	4685	-	ENSPKIP00000005196	965 (aa)	XP_023660157	UPI000CD670A4
ENSPKIT00000029228	-	4560	-	ENSPKIP00000005234	965 (aa)	XP_023660157	UPI000CD670A4

Gene Model

Click here to download ENSPKIG00000021973's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000021973's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000021973	si:ch211-117n7.8	97	54.668	ENSG00000068784	SRBD1	96	54.849	Homo_sapiens
ENSPKIG00000021973	si:ch211-117n7.8	99	61.966	ENSAPOG00000005103	si:ch211-117n7.8	99	62.028	Acanthochromis_polyacanthus
ENSPKIG00000021973	si:ch211-117n7.8	89	58.966	ENSAMEG00000005993	SRBD1	87	58.966	Ailuropoda_melanoleuca
ENSPKIG00000021973	si:ch211-117n7.8	97	60.636	ENSACIG00000009875	si:ch211-117n7.8	99	61.842	Amphilophus_citrinellus
ENSPKIG00000021973	si:ch211-117n7.8	99	61.592	ENSAOCG00000024718	si:ch211-117n7.8	99	62.090	Amphiprion_ocellaris
ENSPKIG00000021973	si:ch211-117n7.8	97	63.843	ENSAPEG00000002645	si:ch211-117n7.8	98	64.361	Amphiprion_percula
ENSPKIG00000021973	si:ch211-117n7.8	99	61.797	ENSATEG00000010844	si:ch211-117n7.8	99	61.834	Anabas_testudineus
ENSPKIG00000021973	si:ch211-117n7.8	85	62.110	ENSAPLG00000006313	SRBD1	96	57.069	Anas_platyrhynchos
ENSPKIG00000021973	si:ch211-117n7.8	97	54.102	ENSANAG00000025573	SRBD1	99	53.119	Aotus_nancymaae
ENSPKIG00000021973	si:ch211-117n7.8	99	60.773	ENSACLG00000024219	si:ch211-117n7.8	99	61.456	Astatotilapia_calliptera
ENSPKIG00000021973	si:ch211-117n7.8	99	65.962	ENSAMXG00000004294	SRBD1	99	66.163	Astyanax_mexicanus
ENSPKIG00000021973	si:ch211-117n7.8	97	53.862	ENSBTAG00000007508	SRBD1	95	52.228	Bos_taurus
ENSPKIG00000021973	si:ch211-117n7.8	97	54.413	ENSCJAG00000000727	SRBD1	96	54.593	Callithrix_jacchus
ENSPKIG00000021973	si:ch211-117n7.8	97	54.425	ENSCAFG00000002554	SRBD1	96	55.556	Canis_familiaris
ENSPKIG00000021973	si:ch211-117n7.8	97	51.731	ENSCAFG00020026284	SRBD1	99	60.071	Canis_lupus_dingo
ENSPKIG00000021973	si:ch211-117n7.8	97	53.862	ENSCHIG00000016535	SRBD1	96	52.503	Capra_hircus
ENSPKIG00000021973	si:ch211-117n7.8	97	54.813	ENSTSYG00000012797	SRBD1	98	54.500	Carlito_syrichta
ENSPKIG00000021973	si:ch211-117n7.8	99	53.636	ENSCPOG00000004773	SRBD1	96	55.532	Cavia_porcellus
ENSPKIG00000021973	si:ch211-117n7.8	97	54.309	ENSCCAG00000025589	SRBD1	96	54.489	Cebus_capucinus
ENSPKIG00000021973	si:ch211-117n7.8	97	54.309	ENSCATG00000039530	SRBD1	96	54.489	Cercocebus_atys
ENSPKIG00000021973	si:ch211-117n7.8	97	54.759	ENSCLAG00000008623	SRBD1	99	54.759	Chinchilla_lanigera
ENSPKIG00000021973	si:ch211-117n7.8	97	54.621	ENSCSAG00000013350	SRBD1	96	54.802	Chlorocebus_sabaeus
ENSPKIG00000021973	si:ch211-117n7.8	84	72.549	ENSCHOG00000003805	SRBD1	72	72.549	Choloepus_hoffmanni
ENSPKIG00000021973	si:ch211-117n7.8	89	59.543	ENSCPBG00000005677	SRBD1	87	59.954	Chrysemys_picta_bellii
ENSPKIG00000021973	si:ch211-117n7.8	80	41.804	ENSCING00000005950	-	99	41.804	Ciona_intestinalis
ENSPKIG00000021973	si:ch211-117n7.8	80	43.059	ENSCSAVG00000000861	-	99	43.059	Ciona_savignyi
ENSPKIG00000021973	si:ch211-117n7.8	97	54.309	ENSCANG00000016307	SRBD1	96	54.489	Colobus_angolensis_palliatus
ENSPKIG00000021973	si:ch211-117n7.8	98	54.433	ENSCGRG00001000513	Srbd1	95	55.450	Cricetulus_griseus_chok1gshd
ENSPKIG00000021973	si:ch211-117n7.8	98	54.433	ENSCGRG00000002283	Srbd1	95	55.450	Cricetulus_griseus_crigri
ENSPKIG00000021973	si:ch211-117n7.8	99	59.172	ENSCSEG00000000856	si:ch211-117n7.8	96	60.308	Cynoglossus_semilaevis
ENSPKIG00000021973	si:ch211-117n7.8	88	67.434	ENSCVAG00000020212	si:ch211-117n7.8	92	67.434	Cyprinodon_variegatus
ENSPKIG00000021973	si:ch211-117n7.8	87	58.596	ENSDNOG00000018686	SRBD1	85	58.596	Dasypus_novemcinctus
ENSPKIG00000021973	si:ch211-117n7.8	99	52.947	ENSDORG00000010468	Srbd1	97	53.293	Dipodomys_ordii
ENSPKIG00000021973	si:ch211-117n7.8	91	33.804	FBgn0051156	CG31156	93	34.130	Drosophila_melanogaster
ENSPKIG00000021973	si:ch211-117n7.8	88	57.013	ENSETEG00000000739	SRBD1	90	57.377	Echinops_telfairi
ENSPKIG00000021973	si:ch211-117n7.8	73	48.611	ENSEBUG00000008902	si:ch211-117n7.8	95	48.611	Eptatretus_burgeri
ENSPKIG00000021973	si:ch211-117n7.8	90	62.432	ENSEASG00005003132	SRBD1	94	61.312	Equus_asinus_asinus
ENSPKIG00000021973	si:ch211-117n7.8	97	54.799	ENSECAG00000013865	SRBD1	98	54.000	Equus_caballus
ENSPKIG00000021973	si:ch211-117n7.8	99	65.477	ENSELUG00000012592	si:ch211-117n7.8	99	65.734	Esox_lucius
ENSPKIG00000021973	si:ch211-117n7.8	85	60.384	ENSFCAG00000005101	SRBD1	83	60.384	Felis_catus
ENSPKIG00000021973	si:ch211-117n7.8	85	61.772	ENSFALG00000012966	SRBD1	85	61.772	Ficedula_albicollis
ENSPKIG00000021973	si:ch211-117n7.8	99	53.611	ENSFDAG00000016670	SRBD1	99	53.611	Fukomys_damarensis
ENSPKIG00000021973	si:ch211-117n7.8	99	60.962	ENSFHEG00000019480	si:ch211-117n7.8	94	63.412	Fundulus_heteroclitus
ENSPKIG00000021973	si:ch211-117n7.8	50	65.258	ENSGMOG00000018010	-	100	65.258	Gadus_morhua
ENSPKIG00000021973	si:ch211-117n7.8	85	61.566	ENSGALG00000009990	SRBD1	84	61.566	Gallus_gallus
ENSPKIG00000021973	si:ch211-117n7.8	99	61.176	ENSGAFG00000019664	si:ch211-117n7.8	94	64.218	Gambusia_affinis
ENSPKIG00000021973	si:ch211-117n7.8	63	68.581	ENSGACG00000010794	si:ch211-117n7.8	100	68.900	Gasterosteus_aculeatus
ENSPKIG00000021973	si:ch211-117n7.8	85	62.065	ENSGAGG00000006166	SRBD1	99	62.065	Gopherus_agassizii
ENSPKIG00000021973	si:ch211-117n7.8	97	54.413	ENSGGOG00000005910	SRBD1	99	54.593	Gorilla_gorilla
ENSPKIG00000021973	si:ch211-117n7.8	96	56.290	ENSHBUG00000013207	si:ch211-117n7.8	95	56.578	Haplochromis_burtoni
ENSPKIG00000021973	si:ch211-117n7.8	97	54.499	ENSHGLG00000018153	-	96	55.898	Heterocephalus_glaber_female
ENSPKIG00000021973	si:ch211-117n7.8	97	54.499	ENSHGLG00100015183	-	96	55.898	Heterocephalus_glaber_male
ENSPKIG00000021973	si:ch211-117n7.8	95	66.667	ENSIPUG00000009661	srbd1	96	66.632	Ictalurus_punctatus
ENSPKIG00000021973	si:ch211-117n7.8	99	54.675	ENSSTOG00000005898	SRBD1	87	59.144	Ictidomys_tridecemlineatus
ENSPKIG00000021973	si:ch211-117n7.8	99	52.053	ENSJJAG00000022244	Srbd1	96	52.804	Jaculus_jaculus
ENSPKIG00000021973	si:ch211-117n7.8	99	62.130	ENSKMAG00000003473	si:ch211-117n7.8	94	64.331	Kryptolebias_marmoratus
ENSPKIG00000021973	si:ch211-117n7.8	99	60.291	ENSLBEG00000027518	si:ch211-117n7.8	99	60.291	Labrus_bergylta
ENSPKIG00000021973	si:ch211-117n7.8	86	62.648	ENSLACG00000009790	SRBD1	99	62.648	Latimeria_chalumnae
ENSPKIG00000021973	si:ch211-117n7.8	93	67.625	ENSLOCG00000016360	si:ch211-117n7.8	99	65.312	Lepisosteus_oculatus
ENSPKIG00000021973	si:ch211-117n7.8	97	54.517	ENSMFAG00000042026	SRBD1	96	54.697	Macaca_fascicularis
ENSPKIG00000021973	si:ch211-117n7.8	97	54.517	ENSMMUG00000003490	SRBD1	96	54.697	Macaca_mulatta
ENSPKIG00000021973	si:ch211-117n7.8	97	52.960	ENSMNEG00000034701	SRBD1	96	53.132	Macaca_nemestrina
ENSPKIG00000021973	si:ch211-117n7.8	97	54.517	ENSMLEG00000000745	SRBD1	96	54.697	Mandrillus_leucophaeus
ENSPKIG00000021973	si:ch211-117n7.8	99	61.268	ENSMAMG00000021921	si:ch211-117n7.8	99	61.117	Mastacembelus_armatus
ENSPKIG00000021973	si:ch211-117n7.8	99	61.030	ENSMZEG00005027369	si:ch211-117n7.8	99	61.456	Maylandia_zebra
ENSPKIG00000021973	si:ch211-117n7.8	81	58.668	ENSMGAG00000010273	SRBD1	99	58.668	Meleagris_gallopavo
ENSPKIG00000021973	si:ch211-117n7.8	79	58.971	ENSMAUG00000013916	Srbd1	99	57.058	Mesocricetus_auratus
ENSPKIG00000021973	si:ch211-117n7.8	97	54.668	ENSMICG00000007835	SRBD1	96	54.849	Microcebus_murinus
ENSPKIG00000021973	si:ch211-117n7.8	98	53.638	ENSMOCG00000018716	Srbd1	96	54.180	Microtus_ochrogaster
ENSPKIG00000021973	si:ch211-117n7.8	97	60.185	ENSMMOG00000007507	si:ch211-117n7.8	97	61.164	Mola_mola
ENSPKIG00000021973	si:ch211-117n7.8	99	60.058	ENSMALG00000001562	si:ch211-117n7.8	99	60.449	Monopterus_albus
ENSPKIG00000021973	si:ch211-117n7.8	87	59.527	MGP_CAROLIEiJ_G0021934	Srbd1	99	60.131	Mus_caroli
ENSPKIG00000021973	si:ch211-117n7.8	98	54.253	ENSMUSG00000024135	Srbd1	100	54.930	Mus_musculus
ENSPKIG00000021973	si:ch211-117n7.8	87	58.747	MGP_PahariEiJ_G0020924	Srbd1	86	58.747	Mus_pahari
ENSPKIG00000021973	si:ch211-117n7.8	98	54.564	MGP_SPRETEiJ_G0022850	Srbd1	86	59.408	Mus_spretus
ENSPKIG00000021973	si:ch211-117n7.8	92	56.195	ENSMLUG00000007039	SRBD1	88	56.195	Myotis_lucifugus
ENSPKIG00000021973	si:ch211-117n7.8	98	52.243	ENSNGAG00000011893	Srbd1	84	57.728	Nannospalax_galili
ENSPKIG00000021973	si:ch211-117n7.8	97	60.692	ENSNBRG00000012873	si:ch211-117n7.8	95	62.724	Neolamprologus_brichardi
ENSPKIG00000021973	si:ch211-117n7.8	97	54.668	ENSNLEG00000016877	SRBD1	96	54.849	Nomascus_leucogenys
ENSPKIG00000021973	si:ch211-117n7.8	93	56.103	ENSODEG00000012095	SRBD1	97	56.103	Octodon_degus
ENSPKIG00000021973	si:ch211-117n7.8	99	60.600	ENSONIG00000000945	si:ch211-117n7.8	100	68.966	Oreochromis_niloticus
ENSPKIG00000021973	si:ch211-117n7.8	95	54.752	ENSOCUG00000015385	SRBD1	96	54.809	Oryctolagus_cuniculus
ENSPKIG00000021973	si:ch211-117n7.8	99	59.591	ENSORLG00000004427	si:ch211-117n7.8	93	61.900	Oryzias_latipes
ENSPKIG00000021973	si:ch211-117n7.8	99	61.951	ENSORLG00020012792	si:ch211-117n7.8	93	64.823	Oryzias_latipes_hni
ENSPKIG00000021973	si:ch211-117n7.8	99	61.831	ENSORLG00015018598	si:ch211-117n7.8	93	64.614	Oryzias_latipes_hsok
ENSPKIG00000021973	si:ch211-117n7.8	99	62.109	ENSOMEG00000012229	si:ch211-117n7.8	96	67.300	Oryzias_melastigma
ENSPKIG00000021973	si:ch211-117n7.8	85	57.656	ENSOGAG00000001076	SRBD1	85	56.659	Otolemur_garnettii
ENSPKIG00000021973	si:ch211-117n7.8	97	50.343	ENSOARG00000005958	SRBD1	96	50.493	Ovis_aries
ENSPKIG00000021973	si:ch211-117n7.8	97	54.357	ENSPPAG00000038442	SRBD1	96	54.640	Pan_paniscus
ENSPKIG00000021973	si:ch211-117n7.8	85	60.337	ENSPPRG00000003449	SRBD1	83	60.337	Panthera_pardus
ENSPKIG00000021973	si:ch211-117n7.8	85	60.457	ENSPTIG00000012495	SRBD1	83	60.457	Panthera_tigris_altaica
ENSPKIG00000021973	si:ch211-117n7.8	97	54.461	ENSPTRG00000011889	SRBD1	96	54.745	Pan_troglodytes
ENSPKIG00000021973	si:ch211-117n7.8	97	54.621	ENSPANG00000008063	SRBD1	96	54.802	Papio_anubis
ENSPKIG00000021973	si:ch211-117n7.8	85	61.705	ENSPSIG00000008992	SRBD1	84	61.705	Pelodiscus_sinensis
ENSPKIG00000021973	si:ch211-117n7.8	85	67.386	ENSPMGG00000013348	si:ch211-117n7.8	99	61.475	Periophthalmus_magnuspinnatus
ENSPKIG00000021973	si:ch211-117n7.8	98	53.096	ENSPEMG00000020684	Srbd1	84	58.698	Peromyscus_maniculatus_bairdii
ENSPKIG00000021973	si:ch211-117n7.8	99	61.696	ENSPFOG00000010650	si:ch211-117n7.8	94	64.196	Poecilia_formosa
ENSPKIG00000021973	si:ch211-117n7.8	99	61.793	ENSPLAG00000002141	si:ch211-117n7.8	94	64.301	Poecilia_latipinna
ENSPKIG00000021973	si:ch211-117n7.8	99	61.793	ENSPMEG00000018537	si:ch211-117n7.8	94	64.301	Poecilia_mexicana
ENSPKIG00000021973	si:ch211-117n7.8	99	61.454	ENSPREG00000003258	si:ch211-117n7.8	94	63.617	Poecilia_reticulata
ENSPKIG00000021973	si:ch211-117n7.8	97	51.270	ENSPPYG00000012444	SRBD1	95	51.325	Pongo_abelii
ENSPKIG00000021973	si:ch211-117n7.8	77	54.826	ENSPCAG00000005629	SRBD1	80	54.826	Procavia_capensis
ENSPKIG00000021973	si:ch211-117n7.8	97	46.019	ENSPCOG00000017669	SRBD1	96	46.256	Propithecus_coquereli
ENSPKIG00000021973	si:ch211-117n7.8	97	48.907	ENSPVAG00000001782	SRBD1	96	49.059	Pteropus_vampyrus
ENSPKIG00000021973	si:ch211-117n7.8	96	59.574	ENSPNYG00000000508	si:ch211-117n7.8	96	59.872	Pundamilia_nyererei
ENSPKIG00000021973	si:ch211-117n7.8	96	67.697	ENSPNAG00000013492	SRBD1	99	66.226	Pygocentrus_nattereri
ENSPKIG00000021973	si:ch211-117n7.8	87	58.690	ENSRNOG00000014720	Srbd1	85	59.026	Rattus_norvegicus
ENSPKIG00000021973	si:ch211-117n7.8	97	54.309	ENSRBIG00000033486	SRBD1	96	54.489	Rhinopithecus_bieti
ENSPKIG00000021973	si:ch211-117n7.8	97	54.309	ENSRROG00000041599	SRBD1	96	54.489	Rhinopithecus_roxellana
ENSPKIG00000021973	si:ch211-117n7.8	97	54.102	ENSSBOG00000024982	SRBD1	96	54.280	Saimiri_boliviensis_boliviensis
ENSPKIG00000021973	si:ch211-117n7.8	96	70.594	ENSSFOG00015001128	si:ch211-117n7.8	99	70.501	Scleropages_formosus
ENSPKIG00000021973	si:ch211-117n7.8	99	58.614	ENSSMAG00000018256	si:ch211-117n7.8	87	63.767	Scophthalmus_maximus
ENSPKIG00000021973	si:ch211-117n7.8	96	62.002	ENSSLDG00000023189	si:ch211-117n7.8	96	62.002	Seriola_lalandi_dorsalis
ENSPKIG00000021973	si:ch211-117n7.8	94	53.098	ENSSARG00000009740	SRBD1	96	53.098	Sorex_araneus
ENSPKIG00000021973	si:ch211-117n7.8	89	61.655	ENSSPUG00000010475	SRBD1	99	60.246	Sphenodon_punctatus
ENSPKIG00000021973	si:ch211-117n7.8	93	62.808	ENSSPAG00000008092	-	93	62.905	Stegastes_partitus
ENSPKIG00000021973	si:ch211-117n7.8	99	54.388	ENSSSCG00000008445	SRBD1	93	54.192	Sus_scrofa
ENSPKIG00000021973	si:ch211-117n7.8	85	61.058	ENSTGUG00000003878	SRBD1	100	61.058	Taeniopygia_guttata
ENSPKIG00000021973	si:ch211-117n7.8	99	59.570	ENSTRUG00000007080	si:ch211-117n7.8	99	63.795	Takifugu_rubripes
ENSPKIG00000021973	si:ch211-117n7.8	99	60.178	ENSTNIG00000007464	si:ch211-117n7.8	96	60.812	Tetraodon_nigroviridis
ENSPKIG00000021973	si:ch211-117n7.8	67	78.723	ENSTBEG00000004556	SRBD1	66	78.723	Tupaia_belangeri
ENSPKIG00000021973	si:ch211-117n7.8	79	62.703	ENSTTRG00000011871	SRBD1	77	62.703	Tursiops_truncatus
ENSPKIG00000021973	si:ch211-117n7.8	89	58.830	ENSUAMG00000008126	SRBD1	97	55.435	Ursus_americanus
ENSPKIG00000021973	si:ch211-117n7.8	89	58.830	ENSUMAG00000012902	SRBD1	85	58.830	Ursus_maritimus
ENSPKIG00000021973	si:ch211-117n7.8	85	60.216	ENSVPAG00000006825	SRBD1	92	60.216	Vicugna_pacos
ENSPKIG00000021973	si:ch211-117n7.8	97	54.277	ENSVVUG00000005389	SRBD1	84	60.072	Vulpes_vulpes
ENSPKIG00000021973	si:ch211-117n7.8	98	46.961	ENSXETG00000002760	srbd1	98	47.520	Xenopus_tropicalis
ENSPKIG00000021973	si:ch211-117n7.8	99	61.111	ENSXMAG00000016861	si:ch211-117n7.8	94	63.788	Xiphophorus_maculatus