EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000022212 (Gene tree)
Gene ID: 111836325
Gene Symbol: -
Alias: -
Full Name: serrate RNA effector molecule homolog
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 13191 bases
Position: chrPGUA01000057.1:1284791-1297981
Accession: 111836325
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000005636	ARS2	PF04959.13	8.3e-88	1	1
ENSPKIP00000005607	ARS2	PF04959.13	8.9e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000029614	-	7610	-	ENSPKIP00000005607	867 (aa)	XP_023653224	UPI000CD6241F
ENSPKIT00000029643	-	2618	-	ENSPKIP00000005636	857 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000022212's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000022212's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000022212	-	98	73.349	ENSPKIG00000005434	srrt	94	73.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000022212	-	96	67.612	ENSG00000087087	SRRT	98	86.957	Homo_sapiens
ENSPKIG00000022212	-	52	81.758	ENSAPOG00000002304	srrt	94	71.770	Acanthochromis_polyacanthus
ENSPKIG00000022212	-	96	65.557	ENSAMEG00000014506	SRRT	51	77.143	Ailuropoda_melanoleuca
ENSPKIG00000022212	-	84	80.659	ENSACIG00000015795	srrt	88	80.220	Amphilophus_citrinellus
ENSPKIG00000022212	-	93	57.983	ENSAOCG00000009189	-	94	58.522	Amphiprion_ocellaris
ENSPKIG00000022212	-	84	81.758	ENSAOCG00000009693	srrt	87	81.319	Amphiprion_ocellaris
ENSPKIG00000022212	-	93	57.983	ENSAPEG00000020016	-	94	58.522	Amphiprion_percula
ENSPKIG00000022212	-	85	81.319	ENSAPEG00000003646	srrt	89	80.879	Amphiprion_percula
ENSPKIG00000022212	-	54	65.833	ENSATEG00000003652	-	85	67.164	Anabas_testudineus
ENSPKIG00000022212	-	95	68.990	ENSATEG00000014425	srrt	94	71.154	Anabas_testudineus
ENSPKIG00000022212	-	52	76.106	ENSACAG00000001014	SRRT	94	65.492	Anolis_carolinensis
ENSPKIG00000022212	-	52	76.344	ENSANAG00000031718	SRRT	94	67.268	Aotus_nancymaae
ENSPKIG00000022212	-	95	70.344	ENSACLG00000013156	srrt	90	70.312	Astatotilapia_calliptera
ENSPKIG00000022212	-	54	66.176	ENSACLG00000009423	-	94	56.991	Astatotilapia_calliptera
ENSPKIG00000022212	-	51	81.333	ENSAMXG00000016671	srrt	91	70.531	Astyanax_mexicanus
ENSPKIG00000022212	-	52	75.914	ENSBTAG00000001134	SRRT	94	66.787	Bos_taurus
ENSPKIG00000022212	-	66	44.295	WBGene00017085	E01A2.2	90	41.201	Caenorhabditis_elegans
ENSPKIG00000022212	-	96	66.432	ENSCJAG00000014917	SRRT	94	67.186	Callithrix_jacchus
ENSPKIG00000022212	-	96	66.902	ENSCAFG00000023538	SRRT	94	66.388	Canis_familiaris
ENSPKIG00000022212	-	98	65.358	ENSCAFG00020013358	SRRT	99	64.010	Canis_lupus_dingo
ENSPKIG00000022212	-	52	76.407	ENSCHIG00000010495	SRRT	94	67.227	Capra_hircus
ENSPKIG00000022212	-	96	65.171	ENSTSYG00000036426	SRRT	97	66.146	Carlito_syrichta
ENSPKIG00000022212	-	95	66.747	ENSCAPG00000013586	SRRT	98	66.949	Cavia_aperea
ENSPKIG00000022212	-	96	65.607	ENSCPOG00000001739	SRRT	94	66.986	Cavia_porcellus
ENSPKIG00000022212	-	96	66.942	ENSCCAG00000015877	SRRT	94	67.268	Cebus_capucinus
ENSPKIG00000022212	-	96	67.612	ENSCATG00000036306	SRRT	96	67.182	Cercocebus_atys
ENSPKIG00000022212	-	96	65.135	ENSCLAG00000007568	SRRT	94	67.464	Chinchilla_lanigera
ENSPKIG00000022212	-	96	67.373	ENSCSAG00000017996	SRRT	94	67.827	Chlorocebus_sabaeus
ENSPKIG00000022212	-	52	74.815	ENSCHOG00000007815	SRRT	67	71.474	Choloepus_hoffmanni
ENSPKIG00000022212	-	74	69.925	ENSCPBG00000011553	SRRT	82	67.170	Chrysemys_picta_bellii
ENSPKIG00000022212	-	100	39.894	ENSCING00000003506	-	55	52.119	Ciona_intestinalis
ENSPKIG00000022212	-	100	41.960	ENSCSAVG00000008394	-	92	55.460	Ciona_savignyi
ENSPKIG00000022212	-	96	67.612	ENSCANG00000034556	SRRT	94	68.072	Colobus_angolensis_palliatus
ENSPKIG00000022212	-	96	65.501	ENSCGRG00001001594	Srrt	94	66.507	Cricetulus_griseus_chok1gshd
ENSPKIG00000022212	-	89	72.152	ENSCGRG00000007292	Srrt	93	75.352	Cricetulus_griseus_crigri
ENSPKIG00000022212	-	54	65.116	ENSCSEG00000005233	-	54	64.211	Cynoglossus_semilaevis
ENSPKIG00000022212	-	98	66.475	ENSCSEG00000017878	srrt	94	65.836	Cynoglossus_semilaevis
ENSPKIG00000022212	-	95	70.700	ENSCVAG00000019848	srrt	94	71.119	Cyprinodon_variegatus
ENSPKIG00000022212	-	91	56.658	ENSCVAG00000017344	-	94	56.750	Cyprinodon_variegatus
ENSPKIG00000022212	-	96	72.454	ENSDARG00000017762	srrt	94	72.406	Danio_rerio
ENSPKIG00000022212	-	52	76.344	ENSDNOG00000003851	SRRT	94	67.861	Dasypus_novemcinctus
ENSPKIG00000022212	-	96	66.864	ENSDORG00000005584	Srrt	94	67.189	Dipodomys_ordii
ENSPKIG00000022212	-	85	50.866	FBgn0033062	Ars2	69	51.717	Drosophila_melanogaster
ENSPKIG00000022212	-	75	73.996	ENSETEG00000016175	SRRT	69	73.362	Echinops_telfairi
ENSPKIG00000022212	-	77	52.129	ENSEBUG00000008517	-	81	60.934	Eptatretus_burgeri
ENSPKIG00000022212	-	96	67.136	ENSEASG00005016956	SRRT	94	67.542	Equus_asinus_asinus
ENSPKIG00000022212	-	96	67.136	ENSECAG00000012292	SRRT	94	67.542	Equus_caballus
ENSPKIG00000022212	-	80	72.561	ENSEEUG00000009117	SRRT	87	71.341	Erinaceus_europaeus
ENSPKIG00000022212	-	96	72.603	ENSELUG00000006651	srrt	94	71.031	Esox_lucius
ENSPKIG00000022212	-	93	60.885	ENSELUG00000021216	-	94	61.484	Esox_lucius
ENSPKIG00000022212	-	96	67.020	ENSFCAG00000006855	SRRT	94	66.787	Felis_catus
ENSPKIG00000022212	-	52	73.451	ENSFDAG00000021347	SRRT	94	66.423	Fukomys_damarensis
ENSPKIG00000022212	-	74	80.049	ENSFHEG00000002756	srrt	84	80.049	Fundulus_heteroclitus
ENSPKIG00000022212	-	54	57.787	ENSFHEG00000004105	-	94	58.439	Fundulus_heteroclitus
ENSPKIG00000022212	-	96	66.784	ENSGMOG00000018619	srrt	93	66.226	Gadus_morhua
ENSPKIG00000022212	-	93	54.300	ENSGAFG00000020383	-	94	55.394	Gambusia_affinis
ENSPKIG00000022212	-	52	80.617	ENSGAFG00000005423	srrt	94	70.913	Gambusia_affinis
ENSPKIG00000022212	-	93	54.038	ENSGACG00000001100	-	52	64.946	Gasterosteus_aculeatus
ENSPKIG00000022212	-	96	69.871	ENSGACG00000020387	srrt	94	69.726	Gasterosteus_aculeatus
ENSPKIG00000022212	-	96	67.296	ENSGGOG00000001508	SRRT	94	67.952	Gorilla_gorilla
ENSPKIG00000022212	-	52	80.000	ENSHBUG00000002942	srrt	90	70.312	Haplochromis_burtoni
ENSPKIG00000022212	-	96	66.745	ENSHGLG00000008344	Srrt	94	66.945	Heterocephalus_glaber_female
ENSPKIG00000022212	-	96	66.980	ENSHGLG00100018857	Srrt	89	72.511	Heterocephalus_glaber_male
ENSPKIG00000022212	-	98	69.213	ENSHCOG00000005403	srrt	94	68.999	Hippocampus_comes
ENSPKIG00000022212	-	93	54.803	ENSHCOG00000008904	-	94	54.768	Hippocampus_comes
ENSPKIG00000022212	-	93	73.174	ENSIPUG00000021150	srrt	94	72.899	Ictalurus_punctatus
ENSPKIG00000022212	-	96	67.376	ENSSTOG00000013776	SRRT	94	67.952	Ictidomys_tridecemlineatus
ENSPKIG00000022212	-	96	67.461	ENSJJAG00000010446	Srrt	94	67.191	Jaculus_jaculus
ENSPKIG00000022212	-	95	69.376	ENSKMAG00000013599	srrt	94	70.000	Kryptolebias_marmoratus
ENSPKIG00000022212	-	93	56.257	ENSKMAG00000008468	-	94	57.059	Kryptolebias_marmoratus
ENSPKIG00000022212	-	98	70.616	ENSLBEG00000016308	srrt	85	79.437	Labrus_bergylta
ENSPKIG00000022212	-	95	56.699	ENSLACG00000001089	SRRT	94	56.496	Latimeria_chalumnae
ENSPKIG00000022212	-	90	62.636	ENSLOCG00000013658	srrt	74	84.810	Lepisosteus_oculatus
ENSPKIG00000022212	-	52	76.129	ENSLAFG00000007725	SRRT	94	66.307	Loxodonta_africana
ENSPKIG00000022212	-	96	67.612	ENSMFAG00000033745	SRRT	98	67.182	Macaca_fascicularis
ENSPKIG00000022212	-	96	67.373	ENSMMUG00000021255	SRRT	94	67.827	Macaca_mulatta
ENSPKIG00000022212	-	96	67.491	ENSMNEG00000041864	SRRT	96	67.182	Macaca_nemestrina
ENSPKIG00000022212	-	96	67.612	ENSMLEG00000029479	SRRT	97	67.182	Mandrillus_leucophaeus
ENSPKIG00000022212	-	87	54.682	ENSMAMG00000010681	-	94	59.048	Mastacembelus_armatus
ENSPKIG00000022212	-	52	81.057	ENSMAMG00000014311	srrt	94	71.514	Mastacembelus_armatus
ENSPKIG00000022212	-	52	80.220	ENSMZEG00005016135	srrt	90	70.433	Maylandia_zebra
ENSPKIG00000022212	-	54	66.387	ENSMZEG00005028002	-	94	57.109	Maylandia_zebra
ENSPKIG00000022212	-	52	75.269	ENSMAUG00000011386	Srrt	89	71.828	Mesocricetus_auratus
ENSPKIG00000022212	-	96	67.412	ENSMICG00000009471	SRRT	96	67.340	Microcebus_murinus
ENSPKIG00000022212	-	52	75.484	ENSMOCG00000001971	Srrt	89	72.258	Microtus_ochrogaster
ENSPKIG00000022212	-	85	55.527	ENSMMOG00000011137	-	83	64.619	Mola_mola
ENSPKIG00000022212	-	95	68.389	ENSMMOG00000016399	srrt	54	79.295	Mola_mola
ENSPKIG00000022212	-	52	72.436	ENSMODG00000004862	SRRT	89	72.436	Monodelphis_domestica
ENSPKIG00000022212	-	58	50.693	ENSMALG00000005567	-	84	53.696	Monopterus_albus
ENSPKIG00000022212	-	87	67.871	ENSMALG00000018604	srrt	99	65.398	Monopterus_albus
ENSPKIG00000022212	-	96	66.038	MGP_CAROLIEiJ_G0027870	Srrt	100	72.491	Mus_caroli
ENSPKIG00000022212	-	96	66.038	ENSMUSG00000037364	Srrt	99	72.491	Mus_musculus
ENSPKIG00000022212	-	96	65.830	MGP_PahariEiJ_G0024456	Srrt	100	72.491	Mus_pahari
ENSPKIG00000022212	-	96	66.038	MGP_SPRETEiJ_G0028875	Srrt	100	72.491	Mus_spretus
ENSPKIG00000022212	-	96	67.019	ENSMPUG00000015839	SRRT	94	66.627	Mustela_putorius_furo
ENSPKIG00000022212	-	52	75.054	ENSMLUG00000009975	SRRT	94	67.344	Myotis_lucifugus
ENSPKIG00000022212	-	96	66.194	ENSNGAG00000023715	Srrt	100	66.575	Nannospalax_galili
ENSPKIG00000022212	-	95	60.454	ENSNLEG00000011987	SRRT	99	60.676	Nomascus_leucogenys
ENSPKIG00000022212	-	96	54.196	ENSMEUG00000011941	SRRT	94	54.753	Notamacropus_eugenii
ENSPKIG00000022212	-	62	74.453	ENSOPRG00000002502	-	67	76.812	Ochotona_princeps
ENSPKIG00000022212	-	96	67.938	ENSODEG00000016856	SRRT	94	67.558	Octodon_degus
ENSPKIG00000022212	-	93	57.058	ENSONIG00000016080	-	94	57.697	Oreochromis_niloticus
ENSPKIG00000022212	-	52	80.220	ENSONIG00000004242	srrt	94	68.750	Oreochromis_niloticus
ENSPKIG00000022212	-	98	68.134	ENSORLG00000008120	srrt	94	68.193	Oryzias_latipes
ENSPKIG00000022212	-	98	68.208	ENSORLG00020003058	srrt	94	68.193	Oryzias_latipes_hni
ENSPKIG00000022212	-	98	68.208	ENSORLG00015008062	srrt	94	68.193	Oryzias_latipes_hsok
ENSPKIG00000022212	-	93	56.444	ENSOMEG00000006963	-	94	58.204	Oryzias_melastigma
ENSPKIG00000022212	-	98	69.284	ENSOMEG00000003155	srrt	88	79.736	Oryzias_melastigma
ENSPKIG00000022212	-	52	76.344	ENSOGAG00000017242	SRRT	94	67.344	Otolemur_garnettii
ENSPKIG00000022212	-	52	76.407	ENSOARG00000015645	SRRT	94	67.227	Ovis_aries
ENSPKIG00000022212	-	96	67.180	ENSPPAG00000041090	SRRT	94	67.633	Pan_paniscus
ENSPKIG00000022212	-	96	66.903	ENSPPRG00000009557	SRRT	94	66.667	Panthera_pardus
ENSPKIG00000022212	-	96	67.020	ENSPTIG00000014355	SRRT	94	66.787	Panthera_tigris_altaica
ENSPKIG00000022212	-	96	67.180	ENSPTRG00000019511	SRRT	99	65.476	Pan_troglodytes
ENSPKIG00000022212	-	95	66.706	ENSPANG00000020763	SRRT	95	67.182	Papio_anubis
ENSPKIG00000022212	-	52	75.610	ENSPSIG00000016311	SRRT	94	66.382	Pelodiscus_sinensis
ENSPKIG00000022212	-	98	69.778	ENSPMGG00000002841	srrt	94	68.447	Periophthalmus_magnuspinnatus
ENSPKIG00000022212	-	52	76.703	ENSPEMG00000010834	Srrt	94	66.909	Peromyscus_maniculatus_bairdii
ENSPKIG00000022212	-	96	54.279	ENSPMAG00000009614	-	55	63.136	Petromyzon_marinus
ENSPKIG00000022212	-	96	65.335	ENSPCIG00000000816	SRRT	94	65.472	Phascolarctos_cinereus
ENSPKIG00000022212	-	93	54.423	ENSPFOG00000016554	-	94	55.569	Poecilia_formosa
ENSPKIG00000022212	-	52	80.659	ENSPFOG00000005704	srrt	94	71.068	Poecilia_formosa
ENSPKIG00000022212	-	93	54.356	ENSPLAG00000004526	-	94	55.168	Poecilia_latipinna
ENSPKIG00000022212	-	95	69.637	ENSPLAG00000021992	srrt	94	69.441	Poecilia_latipinna
ENSPKIG00000022212	-	77	79.521	ENSPMEG00000001182	srrt	94	71.034	Poecilia_mexicana
ENSPKIG00000022212	-	89	53.756	ENSPMEG00000001520	-	94	54.545	Poecilia_mexicana
ENSPKIG00000022212	-	95	71.243	ENSPREG00000022308	srrt	94	70.828	Poecilia_reticulata
ENSPKIG00000022212	-	96	57.109	ENSPPYG00000017432	SRRT	93	57.367	Pongo_abelii
ENSPKIG00000022212	-	96	65.304	ENSPCAG00000001621	SRRT	94	65.714	Procavia_capensis
ENSPKIG00000022212	-	96	67.019	ENSPCOG00000025751	SRRT	94	67.464	Propithecus_coquereli
ENSPKIG00000022212	-	77	59.389	ENSPVAG00000000834	SRRT	100	59.243	Pteropus_vampyrus
ENSPKIG00000022212	-	52	80.220	ENSPNYG00000018710	srrt	94	70.433	Pundamilia_nyererei
ENSPKIG00000022212	-	76	81.928	ENSPNAG00000010629	srrt	92	55.906	Pygocentrus_nattereri
ENSPKIG00000022212	-	52	65.217	ENSRNOG00000048277	AABR07035787.1	92	65.435	Rattus_norvegicus
ENSPKIG00000022212	-	96	67.373	ENSRBIG00000035718	SRRT	96	67.182	Rhinopithecus_bieti
ENSPKIG00000022212	-	96	67.373	ENSRROG00000030622	SRRT	96	67.182	Rhinopithecus_roxellana
ENSPKIG00000022212	-	96	66.942	ENSSBOG00000033570	SRRT	95	67.512	Saimiri_boliviensis_boliviensis
ENSPKIG00000022212	-	71	62.171	ENSSHAG00000007349	-	99	63.906	Sarcophilus_harrisii
ENSPKIG00000022212	-	94	75.948	ENSSFOG00015017293	srrt	93	76.512	Scleropages_formosus
ENSPKIG00000022212	-	95	71.581	ENSSMAG00000015342	srrt	94	72.859	Scophthalmus_maximus
ENSPKIG00000022212	-	54	54.622	ENSSDUG00000002051	-	93	54.624	Seriola_dumerili
ENSPKIG00000022212	-	52	81.718	ENSSDUG00000012049	srrt	94	70.843	Seriola_dumerili
ENSPKIG00000022212	-	84	81.057	ENSSLDG00000017477	srrt	85	81.057	Seriola_lalandi_dorsalis
ENSPKIG00000022212	-	52	81.004	ENSSPAG00000005665	srrt	92	71.122	Stegastes_partitus
ENSPKIG00000022212	-	87	55.890	ENSSPAG00000018943	-	93	59.179	Stegastes_partitus
ENSPKIG00000022212	-	50	75.395	ENSSSCG00000024789	SRRT	99	65.306	Sus_scrofa
ENSPKIG00000022212	-	91	53.701	ENSTRUG00000000023	-	92	54.982	Takifugu_rubripes
ENSPKIG00000022212	-	98	69.240	ENSTRUG00000016075	srrt	94	68.982	Takifugu_rubripes
ENSPKIG00000022212	-	93	55.244	ENSTNIG00000003111	-	94	54.654	Tetraodon_nigroviridis
ENSPKIG00000022212	-	73	66.052	ENSTNIG00000011779	srrt	100	66.052	Tetraodon_nigroviridis
ENSPKIG00000022212	-	61	78.261	ENSTBEG00000005212	SRRT	57	78.261	Tupaia_belangeri
ENSPKIG00000022212	-	52	76.344	ENSTTRG00000011104	SRRT	94	67.464	Tursiops_truncatus
ENSPKIG00000022212	-	96	67.139	ENSUAMG00000027997	SRRT	97	66.547	Ursus_americanus
ENSPKIG00000022212	-	96	67.138	ENSUMAG00000011295	SRRT	94	66.507	Ursus_maritimus
ENSPKIG00000022212	-	96	66.902	ENSVVUG00000023572	SRRT	94	66.388	Vulpes_vulpes
ENSPKIG00000022212	-	73	75.410	ENSXETG00000025124	srrt	70	75.497	Xenopus_tropicalis
ENSPKIG00000022212	-	54	52.866	ENSXCOG00000013105	-	91	52.473	Xiphophorus_couchianus
ENSPKIG00000022212	-	98	71.247	ENSXMAG00000007627	srrt	86	79.476	Xiphophorus_maculatus
ENSPKIG00000022212	-	93	55.351	ENSXMAG00000002090	-	94	55.340	Xiphophorus_maculatus