EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000022232 (Gene tree)
Gene ID: -
Gene Symbol: lrpprc
Alias: -
Full Name: leucine-rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 33009 bases
Position: chrPGUA01000075.1:1621948-1654956
Accession: ZDB-GENE-030131-7887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000005746	PPR	PF01535.20	1.7e-25	1	4
ENSPKIP00000005746	PPR	PF01535.20	1.7e-25	2	4
ENSPKIP00000005746	PPR	PF01535.20	1.7e-25	3	4
ENSPKIP00000005746	PPR	PF01535.20	1.7e-25	4	4
ENSPKIP00000005786	PPR	PF01535.20	1.3e-24	1	4
ENSPKIP00000005786	PPR	PF01535.20	1.3e-24	2	4
ENSPKIP00000005786	PPR	PF01535.20	1.3e-24	3	4
ENSPKIP00000005786	PPR	PF01535.20	1.3e-24	4	4
ENSPKIP00000005688	PPR	PF01535.20	7.7e-16	1	2
ENSPKIP00000005688	PPR	PF01535.20	7.7e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000029696	-	1533	-	ENSPKIP00000005688	510 (aa)	-	-
ENSPKIT00000029798	-	5779	-	ENSPKIP00000005786	1159 (aa)	-	-
ENSPKIT00000029754	-	3723	-	ENSPKIP00000005746	1240 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000022232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000022232's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000022232	lrpprc	97	59.302	ENSAPOG00000016610	lrpprc	95	48.939	Acanthochromis_polyacanthus
ENSPKIG00000022232	lrpprc	95	57.623	ENSAMEG00000005852	LRPPRC	91	57.623	Ailuropoda_melanoleuca
ENSPKIG00000022232	lrpprc	97	57.558	ENSACIG00000009604	lrpprc	89	49.895	Amphilophus_citrinellus
ENSPKIG00000022232	lrpprc	97	59.496	ENSAOCG00000005886	lrpprc	95	47.982	Amphiprion_ocellaris
ENSPKIG00000022232	lrpprc	98	59.369	ENSAPEG00000002937	lrpprc	91	57.751	Amphiprion_percula
ENSPKIG00000022232	lrpprc	97	55.952	ENSATEG00000010555	lrpprc	95	56.774	Anabas_testudineus
ENSPKIG00000022232	lrpprc	97	57.623	ENSACAG00000029278	LRPPRC	90	57.623	Anolis_carolinensis
ENSPKIG00000022232	lrpprc	97	58.744	ENSANAG00000027440	LRPPRC	93	55.577	Aotus_nancymaae
ENSPKIG00000022232	lrpprc	98	62.582	ENSACLG00000023712	lrpprc	94	63.453	Astatotilapia_calliptera
ENSPKIG00000022232	lrpprc	97	56.660	ENSAMXG00000004245	-	95	56.660	Astyanax_mexicanus
ENSPKIG00000022232	lrpprc	97	58.969	ENSCJAG00000000794	LRPPRC	90	58.969	Callithrix_jacchus
ENSPKIG00000022232	lrpprc	98	57.399	ENSCHIG00000020173	LRPPRC	92	57.399	Capra_hircus
ENSPKIG00000022232	lrpprc	92	47.982	ENSCAPG00000013631	LRPPRC	99	40.249	Cavia_aperea
ENSPKIG00000022232	lrpprc	99	48.303	ENSCPOG00000000204	LRPPRC	93	55.272	Cavia_porcellus
ENSPKIG00000022232	lrpprc	97	58.969	ENSCCAG00000031900	LRPPRC	90	58.969	Cebus_capucinus
ENSPKIG00000022232	lrpprc	97	57.848	ENSCATG00000014187	LRPPRC	93	54.960	Cercocebus_atys
ENSPKIG00000022232	lrpprc	96	56.979	ENSCLAG00000005203	LRPPRC	89	56.979	Chinchilla_lanigera
ENSPKIG00000022232	lrpprc	97	57.623	ENSCSAG00000013233	LRPPRC	93	54.865	Chlorocebus_sabaeus
ENSPKIG00000022232	lrpprc	97	54.921	ENSCHOG00000003631	LRPPRC	74	57.528	Choloepus_hoffmanni
ENSPKIG00000022232	lrpprc	98	47.216	ENSCANG00000034961	LRPPRC	99	57.246	Colobus_angolensis_palliatus
ENSPKIG00000022232	lrpprc	97	56.054	ENSCGRG00001016261	Lrpprc	90	56.054	Cricetulus_griseus_chok1gshd
ENSPKIG00000022232	lrpprc	97	56.054	ENSCGRG00000004072	Lrpprc	90	56.054	Cricetulus_griseus_crigri
ENSPKIG00000022232	lrpprc	97	49.501	ENSCSEG00000003850	lrpprc	97	49.501	Cynoglossus_semilaevis
ENSPKIG00000022232	lrpprc	97	60.659	ENSCVAG00000012967	lrpprc	95	48.613	Cyprinodon_variegatus
ENSPKIG00000022232	lrpprc	97	54.335	ENSDARG00000043970	lrpprc	93	50.204	Danio_rerio
ENSPKIG00000022232	lrpprc	97	53.861	ENSDNOG00000012594	-	90	57.399	Dasypus_novemcinctus
ENSPKIG00000022232	lrpprc	85	46.939	ENSDNOG00000032336	-	70	47.045	Dasypus_novemcinctus
ENSPKIG00000022232	lrpprc	97	56.152	ENSDORG00000012233	Lrpprc	90	56.152	Dipodomys_ordii
ENSPKIG00000022232	lrpprc	98	47.719	ENSETEG00000006657	LRPPRC	90	56.502	Echinops_telfairi
ENSPKIG00000022232	lrpprc	79	50.122	ENSEEUG00000012340	LRPPRC	75	50.985	Erinaceus_europaeus
ENSPKIG00000022232	lrpprc	98	53.816	ENSELUG00000012803	lrpprc	99	53.261	Esox_lucius
ENSPKIG00000022232	lrpprc	96	58.969	ENSFCAG00000013468	LRPPRC	90	58.969	Felis_catus
ENSPKIG00000022232	lrpprc	96	53.812	ENSFALG00000012738	LRPPRC	93	53.812	Ficedula_albicollis
ENSPKIG00000022232	lrpprc	96	55.809	ENSFDAG00000015328	LRPPRC	89	55.809	Fukomys_damarensis
ENSPKIG00000022232	lrpprc	97	59.109	ENSFHEG00000019604	lrpprc	95	47.423	Fundulus_heteroclitus
ENSPKIG00000022232	lrpprc	97	56.832	ENSGMOG00000008337	lrpprc	90	61.435	Gadus_morhua
ENSPKIG00000022232	lrpprc	97	58.527	ENSGAFG00000001455	lrpprc	95	48.968	Gambusia_affinis
ENSPKIG00000022232	lrpprc	96	64.286	ENSGACG00000010679	lrpprc	99	48.971	Gasterosteus_aculeatus
ENSPKIG00000022232	lrpprc	77	58.647	ENSGGOG00000041704	-	99	57.740	Gorilla_gorilla
ENSPKIG00000022232	lrpprc	97	58.398	ENSHBUG00000000393	lrpprc	93	50.110	Haplochromis_burtoni
ENSPKIG00000022232	lrpprc	91	56.000	ENSHGLG00000006123	LRPPRC	85	56.000	Heterocephalus_glaber_female
ENSPKIG00000022232	lrpprc	76	53.061	ENSHGLG00100005960	-	98	48.310	Heterocephalus_glaber_male
ENSPKIG00000022232	lrpprc	97	56.202	ENSHCOG00000002107	lrpprc	89	60.538	Hippocampus_comes
ENSPKIG00000022232	lrpprc	97	60.691	ENSIPUG00000009406	lrpprc	89	60.691	Ictalurus_punctatus
ENSPKIG00000022232	lrpprc	97	58.166	ENSSTOG00000011185	LRPPRC	90	58.166	Ictidomys_tridecemlineatus
ENSPKIG00000022232	lrpprc	98	49.344	ENSJJAG00000020475	Lrpprc	90	55.605	Jaculus_jaculus
ENSPKIG00000022232	lrpprc	98	50.262	ENSKMAG00000003287	lrpprc	81	46.701	Kryptolebias_marmoratus
ENSPKIG00000022232	lrpprc	98	56.078	ENSLBEG00000023225	lrpprc	97	56.078	Labrus_bergylta
ENSPKIG00000022232	lrpprc	97	60.538	ENSLACG00000014030	LRPPRC	89	60.538	Latimeria_chalumnae
ENSPKIG00000022232	lrpprc	99	56.125	ENSLOCG00000016390	lrpprc	89	54.582	Lepisosteus_oculatus
ENSPKIG00000022232	lrpprc	98	57.271	ENSLAFG00000008614	LRPPRC	96	57.271	Loxodonta_africana
ENSPKIG00000022232	lrpprc	97	57.848	ENSMFAG00000041560	LRPPRC	99	57.609	Macaca_fascicularis
ENSPKIG00000022232	lrpprc	97	57.848	ENSMMUG00000019841	LRPPRC	99	57.609	Macaca_mulatta
ENSPKIG00000022232	lrpprc	97	57.848	ENSMNEG00000031613	LRPPRC	93	54.960	Macaca_nemestrina
ENSPKIG00000022232	lrpprc	94	60.626	ENSMAMG00000021835	lrpprc	88	60.626	Mastacembelus_armatus
ENSPKIG00000022232	lrpprc	97	58.594	ENSMZEG00005027379	lrpprc	94	50.110	Maylandia_zebra
ENSPKIG00000022232	lrpprc	97	57.399	ENSMAUG00000012118	Lrpprc	91	57.399	Mesocricetus_auratus
ENSPKIG00000022232	lrpprc	97	57.623	ENSMICG00000010486	LRPPRC	90	57.623	Microcebus_murinus
ENSPKIG00000022232	lrpprc	96	57.895	ENSMOCG00000006048	Lrpprc	89	57.895	Microtus_ochrogaster
ENSPKIG00000022232	lrpprc	99	56.705	ENSMMOG00000007830	lrpprc	94	57.143	Mola_mola
ENSPKIG00000022232	lrpprc	97	56.009	ENSMODG00000000648	LRPPRC	99	56.009	Monodelphis_domestica
ENSPKIG00000022232	lrpprc	97	56.480	ENSMALG00000001271	lrpprc	93	47.672	Monopterus_albus
ENSPKIG00000022232	lrpprc	97	58.969	ENSMPUG00000011800	LRPPRC	90	58.969	Mustela_putorius_furo
ENSPKIG00000022232	lrpprc	98	57.399	ENSMLUG00000010575	LRPPRC	96	57.399	Myotis_lucifugus
ENSPKIG00000022232	lrpprc	97	53.307	ENSNGAG00000013069	Lrpprc	90	55.876	Nannospalax_galili
ENSPKIG00000022232	lrpprc	91	58.849	ENSNBRG00000013202	lrpprc	99	53.809	Neolamprologus_brichardi
ENSPKIG00000022232	lrpprc	97	58.072	ENSNLEG00000016782	LRPPRC	93	54.795	Nomascus_leucogenys
ENSPKIG00000022232	lrpprc	98	44.785	ENSOPRG00000016774	LRPPRC	75	54.825	Ochotona_princeps
ENSPKIG00000022232	lrpprc	96	56.726	ENSODEG00000011211	LRPPRC	90	56.726	Octodon_degus
ENSPKIG00000022232	lrpprc	97	59.109	ENSONIG00000000917	lrpprc	95	50.705	Oreochromis_niloticus
ENSPKIG00000022232	lrpprc	68	47.661	ENSOANG00000014670	-	100	47.661	Ornithorhynchus_anatinus
ENSPKIG00000022232	lrpprc	97	54.832	ENSOCUG00000015046	LRPPRC	86	57.718	Oryctolagus_cuniculus
ENSPKIG00000022232	lrpprc	97	59.041	ENSORLG00000004605	lrpprc	99	48.397	Oryzias_latipes
ENSPKIG00000022232	lrpprc	98	52.710	ENSORLG00020012536	lrpprc	99	47.971	Oryzias_latipes_hni
ENSPKIG00000022232	lrpprc	98	56.496	ENSORLG00015018270	lrpprc	93	56.400	Oryzias_latipes_hsok
ENSPKIG00000022232	lrpprc	99	56.445	ENSOMEG00000011863	-	99	56.445	Oryzias_melastigma
ENSPKIG00000022232	lrpprc	91	56.951	ENSOGAG00000012798	LRPPRC	90	56.951	Otolemur_garnettii
ENSPKIG00000022232	lrpprc	98	57.399	ENSOARG00000006522	LRPPRC	90	57.399	Ovis_aries
ENSPKIG00000022232	lrpprc	97	57.399	ENSPPAG00000040876	LRPPRC	93	54.743	Pan_paniscus
ENSPKIG00000022232	lrpprc	96	58.969	ENSPPRG00000006578	LRPPRC	90	58.969	Panthera_pardus
ENSPKIG00000022232	lrpprc	96	58.969	ENSPTIG00000000933	LRPPRC	90	58.969	Panthera_tigris_altaica
ENSPKIG00000022232	lrpprc	97	57.399	ENSPTRG00000011880	LRPPRC	93	54.762	Pan_troglodytes
ENSPKIG00000022232	lrpprc	97	57.399	ENSPANG00000020731	LRPPRC	93	54.563	Papio_anubis
ENSPKIG00000022232	lrpprc	70	53.358	ENSPSIG00000006830	-	96	53.358	Pelodiscus_sinensis
ENSPKIG00000022232	lrpprc	78	47.635	ENSPMGG00000016597	lrpprc	98	47.452	Periophthalmus_magnuspinnatus
ENSPKIG00000022232	lrpprc	91	58.386	ENSPMGG00000013171	-	97	58.386	Periophthalmus_magnuspinnatus
ENSPKIG00000022232	lrpprc	98	42.944	ENSPMAG00000002147	lrpprc	99	40.411	Petromyzon_marinus
ENSPKIG00000022232	lrpprc	97	57.364	ENSPFOG00000011227	lrpprc	97	48.205	Poecilia_formosa
ENSPKIG00000022232	lrpprc	97	57.558	ENSPLAG00000004018	lrpprc	95	48.309	Poecilia_latipinna
ENSPKIG00000022232	lrpprc	97	57.558	ENSPMEG00000016425	lrpprc	95	48.167	Poecilia_mexicana
ENSPKIG00000022232	lrpprc	97	58.140	ENSPREG00000003662	lrpprc	95	49.076	Poecilia_reticulata
ENSPKIG00000022232	lrpprc	67	47.036	ENSPPYG00000029532	-	98	47.712	Pongo_abelii
ENSPKIG00000022232	lrpprc	90	55.914	ENSPCAG00000001430	LRPPRC	74	57.623	Procavia_capensis
ENSPKIG00000022232	lrpprc	97	57.399	ENSPVAG00000002007	LRPPRC	90	57.399	Pteropus_vampyrus
ENSPKIG00000022232	lrpprc	97	61.589	ENSPNYG00000000756	lrpprc	91	62.443	Pundamilia_nyererei
ENSPKIG00000022232	lrpprc	96	63.656	ENSPNAG00000002895	lrpprc	95	49.927	Pygocentrus_nattereri
ENSPKIG00000022232	lrpprc	97	53.502	ENSRNOG00000005877	Lrpprc	84	57.666	Rattus_norvegicus
ENSPKIG00000022232	lrpprc	97	57.623	ENSRBIG00000031552	LRPPRC	84	57.623	Rhinopithecus_bieti
ENSPKIG00000022232	lrpprc	88	57.424	ENSRROG00000042793	-	93	54.960	Rhinopithecus_roxellana
ENSPKIG00000022232	lrpprc	97	58.072	ENSSBOG00000011807	LRPPRC	93	55.186	Saimiri_boliviensis_boliviensis
ENSPKIG00000022232	lrpprc	98	47.632	ENSSHAG00000018725	LRPPRC	99	44.139	Sarcophilus_harrisii
ENSPKIG00000022232	lrpprc	98	69.742	ENSSFOG00015001042	lrpprc	90	69.742	Scleropages_formosus
ENSPKIG00000022232	lrpprc	97	57.400	ENSSMAG00000016811	-	99	57.400	Scophthalmus_maximus
ENSPKIG00000022232	lrpprc	97	56.867	ENSSDUG00000019062	lrpprc	88	60.762	Seriola_dumerili
ENSPKIG00000022232	lrpprc	98	46.631	ENSSLDG00000023028	lrpprc	96	46.843	Seriola_lalandi_dorsalis
ENSPKIG00000022232	lrpprc	98	46.404	ENSSARG00000000426	LRPPRC	89	59.530	Sorex_araneus
ENSPKIG00000022232	lrpprc	97	55.233	ENSSPAG00000000162	lrpprc	89	58.482	Stegastes_partitus
ENSPKIG00000022232	lrpprc	97	56.502	ENSSSCG00000008452	LRPPRC	86	56.502	Sus_scrofa
ENSPKIG00000022232	lrpprc	94	55.635	ENSTGUG00000003759	LRPPRC	93	55.635	Taeniopygia_guttata
ENSPKIG00000022232	lrpprc	97	58.140	ENSTRUG00000008409	lrpprc	92	50.767	Takifugu_rubripes
ENSPKIG00000022232	lrpprc	97	57.256	ENSTNIG00000007470	lrpprc	99	49.365	Tetraodon_nigroviridis
ENSPKIG00000022232	lrpprc	97	53.898	ENSTTRG00000006403	LRPPRC	91	52.463	Tursiops_truncatus
ENSPKIG00000022232	lrpprc	88	57.143	ENSVPAG00000008993	LRPPRC	85	57.143	Vicugna_pacos
ENSPKIG00000022232	lrpprc	98	58.720	ENSXETG00000009296	lrpprc	97	58.720	Xenopus_tropicalis
ENSPKIG00000022232	lrpprc	99	55.599	ENSXCOG00000013343	lrpprc	96	55.599	Xiphophorus_couchianus
ENSPKIG00000022232	lrpprc	97	58.140	ENSXMAG00000018108	lrpprc	89	62.108	Xiphophorus_maculatus