EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000022249 (Gene tree)
Gene ID: 111842023
Gene Symbol: pum3
Alias: -
Full Name: pumilio RNA-binding family member 3
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 7189 bases
Position: chrPGUA01000010.1:3562258-3569446
Accession: ZDB-GENE-030131-9808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000005664	CPL	PF08144.11	1.4e-50	1	1
ENSPKIP00000005720	CPL	PF08144.11	1.4e-49	1	1
ENSPKIP00000005687	CPL	PF08144.11	3.2e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000029728	-	1806	-	ENSPKIP00000005720	601 (aa)	-	-
ENSPKIT00000029695	-	2136	-	ENSPKIP00000005687	711 (aa)	-	-
ENSPKIT00000029671	-	2103	-	ENSPKIP00000005664	700 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000022249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000022249's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000022249	pum3	98	65.584	ENSG00000080608	PUM3	99	64.715	Homo_sapiens
ENSPKIG00000022249	pum3	98	60.920	ENSAPOG00000020252	pum3	100	62.232	Acanthochromis_polyacanthus
ENSPKIG00000022249	pum3	96	66.611	ENSAMEG00000012187	PUM3	99	64.427	Ailuropoda_melanoleuca
ENSPKIG00000022249	pum3	91	59.358	ENSACIG00000009786	pum3	94	61.702	Amphilophus_citrinellus
ENSPKIG00000022249	pum3	95	62.081	ENSAOCG00000004439	pum3	100	62.232	Amphiprion_ocellaris
ENSPKIG00000022249	pum3	95	62.081	ENSAPEG00000020523	pum3	100	62.232	Amphiprion_percula
ENSPKIG00000022249	pum3	92	63.356	ENSATEG00000005799	pum3	99	63.328	Anabas_testudineus
ENSPKIG00000022249	pum3	99	63.269	ENSAPLG00000002920	PUM3	98	66.181	Anas_platyrhynchos
ENSPKIG00000022249	pum3	88	66.983	ENSACAG00000003174	PUM3	99	63.272	Anolis_carolinensis
ENSPKIG00000022249	pum3	99	64.696	ENSANAG00000024520	PUM3	99	64.516	Aotus_nancymaae
ENSPKIG00000022249	pum3	99	59.872	ENSACLG00000001017	pum3	99	60.976	Astatotilapia_calliptera
ENSPKIG00000022249	pum3	99	75.493	ENSAMXG00000020911	pum3	100	76.636	Astyanax_mexicanus
ENSPKIG00000022249	pum3	96	66.445	ENSBTAG00000013357	PUM3	99	64.653	Bos_taurus
ENSPKIG00000022249	pum3	75	32.035	WBGene00014165	puf-12	62	32.919	Caenorhabditis_elegans
ENSPKIG00000022249	pum3	99	65.696	ENSCJAG00000010917	PUM3	99	64.670	Callithrix_jacchus
ENSPKIG00000022249	pum3	96	66.110	ENSCAFG00000002035	PUM3	99	64.329	Canis_familiaris
ENSPKIG00000022249	pum3	96	66.110	ENSCAFG00020026867	PUM3	99	64.329	Canis_lupus_dingo
ENSPKIG00000022249	pum3	96	66.556	ENSCHIG00000021559	PUM3	99	64.536	Capra_hircus
ENSPKIG00000022249	pum3	99	63.242	ENSTSYG00000007481	PUM3	99	62.691	Carlito_syrichta
ENSPKIG00000022249	pum3	96	64.765	ENSCAPG00000010592	-	99	62.253	Cavia_aperea
ENSPKIG00000022249	pum3	96	65.225	ENSCPOG00000008552	-	99	62.963	Cavia_porcellus
ENSPKIG00000022249	pum3	99	64.480	ENSCCAG00000032650	PUM3	99	64.363	Cebus_capucinus
ENSPKIG00000022249	pum3	96	66.722	ENSCATG00000024880	PUM3	99	64.977	Cercocebus_atys
ENSPKIG00000022249	pum3	96	66.057	ENSCLAG00000011892	PUM3	99	63.623	Chinchilla_lanigera
ENSPKIG00000022249	pum3	96	66.113	ENSCSAG00000008691	PUM3	99	64.516	Chlorocebus_sabaeus
ENSPKIG00000022249	pum3	81	56.088	ENSCHOG00000002535	PUM3	74	57.400	Choloepus_hoffmanni
ENSPKIG00000022249	pum3	98	65.225	ENSCPBG00000025470	PUM3	95	64.055	Chrysemys_picta_bellii
ENSPKIG00000022249	pum3	83	38.136	ENSCING00000024199	-	99	38.136	Ciona_intestinalis
ENSPKIG00000022249	pum3	94	37.148	ENSCSAVG00000006072	-	99	39.544	Ciona_savignyi
ENSPKIG00000022249	pum3	96	66.778	ENSCANG00000006142	PUM3	99	64.220	Colobus_angolensis_palliatus
ENSPKIG00000022249	pum3	96	65.449	ENSCGRG00001016402	Pum3	99	63.581	Cricetulus_griseus_chok1gshd
ENSPKIG00000022249	pum3	96	65.449	ENSCGRG00000010207	Pum3	99	63.581	Cricetulus_griseus_crigri
ENSPKIG00000022249	pum3	89	61.780	ENSCSEG00000001565	pum3	99	62.912	Cynoglossus_semilaevis
ENSPKIG00000022249	pum3	72	52.941	ENSCVAG00000006550	pum3	100	57.196	Cyprinodon_variegatus
ENSPKIG00000022249	pum3	99	74.178	ENSDARG00000087779	pum3	100	74.611	Danio_rerio
ENSPKIG00000022249	pum3	96	56.053	ENSDNOG00000008157	PUM3	71	55.120	Dasypus_novemcinctus
ENSPKIG00000022249	pum3	86	67.552	ENSETEG00000015331	PUM3	84	69.174	Echinops_telfairi
ENSPKIG00000022249	pum3	84	39.658	ENSEBUG00000011586	pum3	78	41.635	Eptatretus_burgeri
ENSPKIG00000022249	pum3	96	67.221	ENSEASG00005010350	PUM3	99	65.145	Equus_asinus_asinus
ENSPKIG00000022249	pum3	96	66.889	ENSECAG00000017193	PUM3	99	64.840	Equus_caballus
ENSPKIG00000022249	pum3	87	60.589	ENSEEUG00000010314	PUM3	100	58.170	Erinaceus_europaeus
ENSPKIG00000022249	pum3	99	73.399	ENSELUG00000002215	pum3	99	73.333	Esox_lucius
ENSPKIG00000022249	pum3	99	63.011	ENSFALG00000010509	PUM3	99	63.359	Ficedula_albicollis
ENSPKIG00000022249	pum3	96	65.116	ENSFDAG00000021027	PUM3	99	63.678	Fukomys_damarensis
ENSPKIG00000022249	pum3	87	64.444	ENSFHEG00000015576	pum3	94	67.688	Fundulus_heteroclitus
ENSPKIG00000022249	pum3	87	63.619	ENSGMOG00000014217	pum3	99	66.045	Gadus_morhua
ENSPKIG00000022249	pum3	99	63.443	ENSGALG00000010178	PUM3	93	66.230	Gallus_gallus
ENSPKIG00000022249	pum3	58	61.918	ENSGAFG00000001930	pum3	62	64.560	Gambusia_affinis
ENSPKIG00000022249	pum3	87	64.673	ENSGACG00000017878	pum3	98	67.477	Gasterosteus_aculeatus
ENSPKIG00000022249	pum3	99	63.980	ENSGAGG00000018983	PUM3	99	63.524	Gopherus_agassizii
ENSPKIG00000022249	pum3	99	65.372	ENSGGOG00000006143	PUM3	99	64.670	Gorilla_gorilla
ENSPKIG00000022249	pum3	92	55.986	ENSHBUG00000012903	pum3	99	54.688	Haplochromis_burtoni
ENSPKIG00000022249	pum3	98	64.019	ENSHGLG00000015868	-	99	63.415	Heterocephalus_glaber_female
ENSPKIG00000022249	pum3	98	64.019	ENSHGLG00100018825	PUM3	99	63.511	Heterocephalus_glaber_male
ENSPKIG00000022249	pum3	98	61.020	ENSHCOG00000010306	pum3	100	60.448	Hippocampus_comes
ENSPKIG00000022249	pum3	99	72.772	ENSIPUG00000024801	pum3	100	72.939	Ictalurus_punctatus
ENSPKIG00000022249	pum3	98	63.533	ENSSTOG00000009586	PUM3	99	63.110	Ictidomys_tridecemlineatus
ENSPKIG00000022249	pum3	96	64.725	ENSJJAG00000012563	Pum3	99	62.462	Jaculus_jaculus
ENSPKIG00000022249	pum3	98	61.333	ENSKMAG00000010277	pum3	99	62.150	Kryptolebias_marmoratus
ENSPKIG00000022249	pum3	95	61.526	ENSLBEG00000012213	pum3	100	61.934	Labrus_bergylta
ENSPKIG00000022249	pum3	95	63.884	ENSLACG00000008312	PUM3	99	63.876	Latimeria_chalumnae
ENSPKIG00000022249	pum3	99	73.727	ENSLOCG00000012529	pum3	100	74.650	Lepisosteus_oculatus
ENSPKIG00000022249	pum3	98	65.416	ENSLAFG00000017341	PUM3	99	64.024	Loxodonta_africana
ENSPKIG00000022249	pum3	96	66.556	ENSMFAG00000001430	PUM3	99	64.823	Macaca_fascicularis
ENSPKIG00000022249	pum3	96	66.445	ENSMMUG00000002362	PUM3	99	64.242	Macaca_mulatta
ENSPKIG00000022249	pum3	96	66.556	ENSMNEG00000035288	PUM3	99	64.823	Macaca_nemestrina
ENSPKIG00000022249	pum3	96	66.445	ENSMLEG00000034820	PUM3	99	64.670	Mandrillus_leucophaeus
ENSPKIG00000022249	pum3	91	63.523	ENSMAMG00000022861	pum3	99	61.492	Mastacembelus_armatus
ENSPKIG00000022249	pum3	99	59.711	ENSMZEG00005014205	pum3	99	60.329	Maylandia_zebra
ENSPKIG00000022249	pum3	94	62.098	ENSMGAG00000002255	PUM3	98	58.232	Meleagris_gallopavo
ENSPKIG00000022249	pum3	99	64.959	ENSMAUG00000009733	Pum3	99	63.222	Mesocricetus_auratus
ENSPKIG00000022249	pum3	99	65.372	ENSMICG00000045916	PUM3	87	64.091	Microcebus_murinus
ENSPKIG00000022249	pum3	99	64.793	ENSMOCG00000019519	-	99	62.844	Microtus_ochrogaster
ENSPKIG00000022249	pum3	99	62.645	ENSMOCG00000014830	-	99	61.491	Microtus_ochrogaster
ENSPKIG00000022249	pum3	99	58.361	ENSMMOG00000012184	pum3	99	58.466	Mola_mola
ENSPKIG00000022249	pum3	99	61.551	ENSMODG00000015417	PUM3	91	59.665	Monodelphis_domestica
ENSPKIG00000022249	pum3	98	61.058	ENSMALG00000022164	pum3	93	63.301	Monopterus_albus
ENSPKIG00000022249	pum3	99	64.298	MGP_CAROLIEiJ_G0022845	Pum3	99	62.443	Mus_caroli
ENSPKIG00000022249	pum3	99	63.802	ENSMUSG00000041360	Pum3	99	61.985	Mus_musculus
ENSPKIG00000022249	pum3	99	63.967	MGP_PahariEiJ_G0014338	Pum3	99	62.367	Mus_pahari
ENSPKIG00000022249	pum3	99	63.967	MGP_SPRETEiJ_G0023763	Pum3	99	62.137	Mus_spretus
ENSPKIG00000022249	pum3	96	64.716	ENSMPUG00000005125	PUM3	99	63.706	Mustela_putorius_furo
ENSPKIG00000022249	pum3	96	65.333	ENSMLUG00000002309	PUM3	99	63.567	Myotis_lucifugus
ENSPKIG00000022249	pum3	92	60.823	ENSNGAG00000019468	Pum3	99	61.069	Nannospalax_galili
ENSPKIG00000022249	pum3	99	57.048	ENSNBRG00000021370	pum3	94	58.746	Neolamprologus_brichardi
ENSPKIG00000022249	pum3	96	66.611	ENSNLEG00000008712	PUM3	99	64.977	Nomascus_leucogenys
ENSPKIG00000022249	pum3	76	51.754	ENSMEUG00000013606	-	99	51.093	Notamacropus_eugenii
ENSPKIG00000022249	pum3	72	57.110	ENSOPRG00000004225	-	65	57.110	Ochotona_princeps
ENSPKIG00000022249	pum3	97	60.616	ENSODEG00000016477	-	99	58.673	Octodon_degus
ENSPKIG00000022249	pum3	97	65.082	ENSODEG00000003625	-	99	63.927	Octodon_degus
ENSPKIG00000022249	pum3	99	58.871	ENSONIG00000012733	pum3	99	60.031	Oreochromis_niloticus
ENSPKIG00000022249	pum3	86	66.919	ENSOANG00000014995	PUM3	99	69.343	Ornithorhynchus_anatinus
ENSPKIG00000022249	pum3	97	63.770	ENSOCUG00000026104	-	99	62.980	Oryctolagus_cuniculus
ENSPKIG00000022249	pum3	97	63.934	ENSOCUG00000004189	-	99	63.166	Oryctolagus_cuniculus
ENSPKIG00000022249	pum3	92	60.453	ENSORLG00000014935	pum3	99	59.049	Oryzias_latipes
ENSPKIG00000022249	pum3	99	57.835	ENSORLG00020002841	pum3	99	59.231	Oryzias_latipes_hni
ENSPKIG00000022249	pum3	99	58.132	ENSORLG00015015906	pum3	99	58.742	Oryzias_latipes_hsok
ENSPKIG00000022249	pum3	97	58.292	ENSOMEG00000009427	pum3	99	58.422	Oryzias_melastigma
ENSPKIG00000022249	pum3	98	48.172	ENSOGAG00000033481	-	99	49.285	Otolemur_garnettii
ENSPKIG00000022249	pum3	99	65.428	ENSOGAG00000008125	-	99	64.590	Otolemur_garnettii
ENSPKIG00000022249	pum3	96	66.500	ENSOARG00000013337	PUM3	99	64.231	Ovis_aries
ENSPKIG00000022249	pum3	98	65.584	ENSPPAG00000041337	PUM3	99	64.715	Pan_paniscus
ENSPKIG00000022249	pum3	96	64.942	ENSPPRG00000000809	PUM3	99	63.206	Panthera_pardus
ENSPKIG00000022249	pum3	96	65.385	ENSPTIG00000021934	PUM3	99	63.511	Panthera_tigris_altaica
ENSPKIG00000022249	pum3	98	65.747	ENSPTRG00000020735	PUM3	99	64.869	Pan_troglodytes
ENSPKIG00000022249	pum3	97	65.957	ENSPANG00000025118	PUM3	99	64.823	Papio_anubis
ENSPKIG00000022249	pum3	98	63.727	ENSPSIG00000016272	PUM3	99	63.369	Pelodiscus_sinensis
ENSPKIG00000022249	pum3	80	66.046	ENSPMGG00000021261	pum3	99	66.599	Periophthalmus_magnuspinnatus
ENSPKIG00000022249	pum3	99	52.295	ENSPEMG00000019340	-	99	52.294	Peromyscus_maniculatus_bairdii
ENSPKIG00000022249	pum3	99	59.968	ENSPCIG00000030598	PUM3	83	61.722	Phascolarctos_cinereus
ENSPKIG00000022249	pum3	99	57.471	ENSPFOG00000001719	pum3	98	59.539	Poecilia_formosa
ENSPKIG00000022249	pum3	99	57.556	ENSPLAG00000020010	pum3	100	58.232	Poecilia_latipinna
ENSPKIG00000022249	pum3	99	57.395	ENSPMEG00000017451	pum3	100	58.079	Poecilia_mexicana
ENSPKIG00000022249	pum3	53	70.000	ENSPREG00000019478	-	69	70.000	Poecilia_reticulata
ENSPKIG00000022249	pum3	96	66.722	ENSPPYG00000019255	PUM3	99	64.977	Pongo_abelii
ENSPKIG00000022249	pum3	99	53.241	ENSPCAG00000005797	PUM3	95	55.860	Procavia_capensis
ENSPKIG00000022249	pum3	99	65.372	ENSPCOG00000027325	PUM3	99	64.384	Propithecus_coquereli
ENSPKIG00000022249	pum3	96	64.393	ENSPVAG00000016135	PUM3	95	61.818	Pteropus_vampyrus
ENSPKIG00000022249	pum3	99	59.872	ENSPNYG00000016124	pum3	99	60.823	Pundamilia_nyererei
ENSPKIG00000022249	pum3	99	72.323	ENSPNAG00000026524	pum3	100	73.520	Pygocentrus_nattereri
ENSPKIG00000022249	pum3	99	65.620	ENSRNOG00000012574	Pum3	99	63.761	Rattus_norvegicus
ENSPKIG00000022249	pum3	99	64.901	ENSRNOG00000048356	RGD1308750	99	63.456	Rattus_norvegicus
ENSPKIG00000022249	pum3	96	66.444	ENSRBIG00000036924	PUM3	99	63.914	Rhinopithecus_bieti
ENSPKIG00000022249	pum3	96	66.611	ENSRROG00000041089	PUM3	99	64.067	Rhinopithecus_roxellana
ENSPKIG00000022249	pum3	99	65.210	ENSSBOG00000028066	PUM3	99	63.720	Saimiri_boliviensis_boliviensis
ENSPKIG00000022249	pum3	98	60.258	ENSSHAG00000003730	PUM3	99	61.350	Sarcophilus_harrisii
ENSPKIG00000022249	pum3	99	79.768	ENSSFOG00015018778	pum3	100	79.938	Scleropages_formosus
ENSPKIG00000022249	pum3	87	65.736	ENSSMAG00000013236	pum3	100	62.105	Scophthalmus_maximus
ENSPKIG00000022249	pum3	99	61.011	ENSSDUG00000001887	pum3	100	61.550	Seriola_dumerili
ENSPKIG00000022249	pum3	97	61.438	ENSSLDG00000015766	pum3	100	62.443	Seriola_lalandi_dorsalis
ENSPKIG00000022249	pum3	97	61.120	ENSSARG00000000579	PUM3	98	63.201	Sorex_araneus
ENSPKIG00000022249	pum3	98	64.120	ENSSPUG00000001707	PUM3	99	64.230	Sphenodon_punctatus
ENSPKIG00000022249	pum3	97	60.762	ENSSPAG00000003976	pum3	100	62.080	Stegastes_partitus
ENSPKIG00000022249	pum3	96	66.389	ENSSSCG00000005227	PUM3	99	64.991	Sus_scrofa
ENSPKIG00000022249	pum3	99	63.770	ENSTGUG00000005339	PUM3	99	64.541	Taeniopygia_guttata
ENSPKIG00000022249	pum3	99	61.367	ENSTRUG00000004074	pum3	98	62.557	Takifugu_rubripes
ENSPKIG00000022249	pum3	98	63.000	ENSTNIG00000010325	pum3	99	62.853	Tetraodon_nigroviridis
ENSPKIG00000022249	pum3	86	50.284	ENSTBEG00000013058	PUM3	85	52.269	Tupaia_belangeri
ENSPKIG00000022249	pum3	96	59.333	ENSTTRG00000001062	PUM3	96	57.208	Tursiops_truncatus
ENSPKIG00000022249	pum3	96	59.766	ENSUMAG00000018443	PUM3	99	65.913	Ursus_maritimus
ENSPKIG00000022249	pum3	96	65.557	ENSVPAG00000010766	PUM3	99	64.036	Vicugna_pacos
ENSPKIG00000022249	pum3	96	66.277	ENSVVUG00000006527	PUM3	99	64.482	Vulpes_vulpes
ENSPKIG00000022249	pum3	99	56.444	ENSXETG00000011707	pum3	98	55.901	Xenopus_tropicalis
ENSPKIG00000022249	pum3	99	55.537	ENSXCOG00000006725	pum3	100	57.423	Xiphophorus_couchianus
ENSPKIG00000022249	pum3	99	56.958	ENSXMAG00000002926	pum3	99	57.274	Xiphophorus_maculatus