EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000022303 (Gene tree)
Gene ID: 111844171
Gene Symbol: SCRT1
Alias: -
Full Name: transcriptional repressor scratch 1-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 4107 bases
Position: chrPGUA01000002.1:6910521-6914627
Accession: 111844171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000005752	zf-C2H2	PF00096.26	2e-25	1	4
ENSPKIP00000005752	zf-C2H2	PF00096.26	2e-25	2	4
ENSPKIP00000005752	zf-C2H2	PF00096.26	2e-25	3	4
ENSPKIP00000005752	zf-C2H2	PF00096.26	2e-25	4	4
ENSPKIP00000005752	zf-met	PF12874.7	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000029760	SCRT1-201	3179	-	ENSPKIP00000005752	279 (aa)	XP_023668169	UPI000CD5E18F

Gene Model

Click here to download ENSPKIG00000022303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000022303's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000022303	SCRT1	52	35.780	ENSPKIG00000017781	-	72	37.313
ENSPKIG00000022303	SCRT1	54	33.835	ENSPKIG00000002670	-	53	33.835
ENSPKIG00000022303	SCRT1	68	41.071	ENSPKIG00000007643	gfi1b	58	41.071
ENSPKIG00000022303	SCRT1	80	43.137	ENSPKIG00000009111	-	94	39.098
ENSPKIG00000022303	SCRT1	59	36.296	ENSPKIG00000015951	-	70	36.296
ENSPKIG00000022303	SCRT1	51	45.333	ENSPKIG00000018168	znf236	50	45.333
ENSPKIG00000022303	SCRT1	56	37.313	ENSPKIG00000006563	-	99	37.313
ENSPKIG00000022303	SCRT1	53	44.000	ENSPKIG00000015492	prdm5	53	44.000
ENSPKIG00000022303	SCRT1	52	49.333	ENSPKIG00000006393	snai1a	58	49.333
ENSPKIG00000022303	SCRT1	59	36.029	ENSPKIG00000012290	-	92	49.315
ENSPKIG00000022303	SCRT1	62	36.090	ENSPKIG00000012069	-	98	36.090
ENSPKIG00000022303	SCRT1	100	92.115	ENSPKIG00000020085	scrt1a	100	92.115
ENSPKIG00000022303	SCRT1	50	34.532	ENSPKIG00000020324	-	53	34.646
ENSPKIG00000022303	SCRT1	95	41.418	ENSPKIG00000002254	SNAI2	98	42.593
ENSPKIG00000022303	SCRT1	54	42.857	ENSPKIG00000006616	-	57	42.857
ENSPKIG00000022303	SCRT1	95	37.329	ENSPKIG00000007872	SNAI3	99	37.329

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000022303	SCRT1	97	70.652	ENSAPOG00000003680	scrt2	96	70.652	Acanthochromis_polyacanthus
ENSPKIG00000022303	SCRT1	99	79.021	ENSAPOG00000015197	-	99	79.021	Acanthochromis_polyacanthus
ENSPKIG00000022303	SCRT1	100	87.544	ENSAPOG00000009279	scrt1b	100	87.544	Acanthochromis_polyacanthus
ENSPKIG00000022303	SCRT1	97	70.652	ENSACIG00000012604	scrt2	96	70.652	Amphilophus_citrinellus
ENSPKIG00000022303	SCRT1	96	58.333	ENSACIG00000001296	-	96	58.333	Amphilophus_citrinellus
ENSPKIG00000022303	SCRT1	99	77.852	ENSACIG00000006586	-	99	77.852	Amphilophus_citrinellus
ENSPKIG00000022303	SCRT1	100	85.816	ENSACIG00000013613	scrt1b	100	85.816	Amphilophus_citrinellus
ENSPKIG00000022303	SCRT1	100	88.256	ENSAOCG00000003910	scrt1b	100	88.256	Amphiprion_ocellaris
ENSPKIG00000022303	SCRT1	99	77.517	ENSAOCG00000023304	-	99	77.517	Amphiprion_ocellaris
ENSPKIG00000022303	SCRT1	97	70.652	ENSAOCG00000021557	scrt2	96	70.652	Amphiprion_ocellaris
ENSPKIG00000022303	SCRT1	99	77.517	ENSAPEG00000005677	-	99	77.517	Amphiprion_percula
ENSPKIG00000022303	SCRT1	100	87.900	ENSAPEG00000000869	scrt1b	100	87.900	Amphiprion_percula
ENSPKIG00000022303	SCRT1	97	70.652	ENSAPEG00000022558	scrt2	96	70.652	Amphiprion_percula
ENSPKIG00000022303	SCRT1	100	88.256	ENSATEG00000002302	scrt1b	100	88.256	Anabas_testudineus
ENSPKIG00000022303	SCRT1	99	78.521	ENSATEG00000011660	-	99	78.521	Anabas_testudineus
ENSPKIG00000022303	SCRT1	97	67.638	ENSATEG00000023998	scrt2	97	67.638	Anabas_testudineus
ENSPKIG00000022303	SCRT1	96	54.921	ENSATEG00000003195	-	97	54.921	Anabas_testudineus
ENSPKIG00000022303	SCRT1	77	75.234	ENSACAG00000016109	SCRT2	95	75.234	Anolis_carolinensis
ENSPKIG00000022303	SCRT1	99	75.748	ENSACLG00000012046	-	99	75.748	Astatotilapia_calliptera
ENSPKIG00000022303	SCRT1	100	87.900	ENSACLG00000007162	scrt1b	100	87.900	Astatotilapia_calliptera
ENSPKIG00000022303	SCRT1	98	84.783	ENSAMXG00000042624	SCRT1	99	84.783	Astyanax_mexicanus
ENSPKIG00000022303	SCRT1	88	69.960	ENSAMXG00000034158	scrt2	92	69.960	Astyanax_mexicanus
ENSPKIG00000022303	SCRT1	100	87.097	ENSAMXG00000038085	scrt1a	100	87.097	Astyanax_mexicanus
ENSPKIG00000022303	SCRT1	58	61.728	WBGene00000468	ces-1	60	60.976	Caenorhabditis_elegans
ENSPKIG00000022303	SCRT1	99	88.489	ENSCPBG00000018899	SCRT1	99	88.489	Chrysemys_picta_bellii
ENSPKIG00000022303	SCRT1	86	63.200	ENSCPBG00000027613	SCRT2	100	63.200	Chrysemys_picta_bellii
ENSPKIG00000022303	SCRT1	97	67.327	ENSCSEG00000021542	scrt2	97	67.327	Cynoglossus_semilaevis
ENSPKIG00000022303	SCRT1	100	87.900	ENSCSEG00000008596	scrt1b	100	87.900	Cynoglossus_semilaevis
ENSPKIG00000022303	SCRT1	99	76.014	ENSCSEG00000014892	-	99	76.014	Cynoglossus_semilaevis
ENSPKIG00000022303	SCRT1	100	87.544	ENSCVAG00000009561	scrt1b	100	87.544	Cyprinodon_variegatus
ENSPKIG00000022303	SCRT1	97	67.314	ENSCVAG00000021038	scrt2	97	67.314	Cyprinodon_variegatus
ENSPKIG00000022303	SCRT1	99	77.852	ENSCVAG00000003190	-	99	77.852	Cyprinodon_variegatus
ENSPKIG00000022303	SCRT1	100	89.247	ENSDARG00000100821	scrt1a	100	89.247	Danio_rerio
ENSPKIG00000022303	SCRT1	100	88.889	ENSDARG00000040214	scrt1b	100	88.889	Danio_rerio
ENSPKIG00000022303	SCRT1	100	90.714	ENSELUG00000005435	scrt1b	100	90.714	Esox_lucius
ENSPKIG00000022303	SCRT1	99	89.209	ENSELUG00000022228	scrt1a	99	89.209	Esox_lucius
ENSPKIG00000022303	SCRT1	97	65.815	ENSELUG00000023883	scrt2	96	66.134	Esox_lucius
ENSPKIG00000022303	SCRT1	83	72.103	ENSFALG00000005718	SCRT2	97	72.103	Ficedula_albicollis
ENSPKIG00000022303	SCRT1	96	64.074	ENSFDAG00000008733	SCRT1	97	64.074	Fukomys_damarensis
ENSPKIG00000022303	SCRT1	97	71.739	ENSFHEG00000005732	scrt2	96	71.739	Fundulus_heteroclitus
ENSPKIG00000022303	SCRT1	99	77.181	ENSFHEG00000009794	-	99	77.181	Fundulus_heteroclitus
ENSPKIG00000022303	SCRT1	100	87.189	ENSFHEG00000014820	scrt1b	100	87.189	Fundulus_heteroclitus
ENSPKIG00000022303	SCRT1	57	93.548	ENSGMOG00000013833	-	54	93.548	Gadus_morhua
ENSPKIG00000022303	SCRT1	99	85.000	ENSGMOG00000000629	scrt1b	100	85.000	Gadus_morhua
ENSPKIG00000022303	SCRT1	97	62.136	ENSGMOG00000019519	scrt2	96	62.136	Gadus_morhua
ENSPKIG00000022303	SCRT1	97	65.201	ENSGALG00000028912	SCRT2	97	65.568	Gallus_gallus
ENSPKIG00000022303	SCRT1	99	77.385	ENSGAFG00000009650	-	99	77.385	Gambusia_affinis
ENSPKIG00000022303	SCRT1	100	86.786	ENSGAFG00000007636	scrt1b	100	86.786	Gambusia_affinis
ENSPKIG00000022303	SCRT1	97	68.013	ENSGAFG00000003093	scrt2	97	68.013	Gambusia_affinis
ENSPKIG00000022303	SCRT1	99	84.229	ENSGACG00000008982	scrt1b	99	84.229	Gasterosteus_aculeatus
ENSPKIG00000022303	SCRT1	99	76.871	ENSGACG00000004072	-	99	76.871	Gasterosteus_aculeatus
ENSPKIG00000022303	SCRT1	66	78.378	ENSGAGG00000020760	-	69	80.899	Gopherus_agassizii
ENSPKIG00000022303	SCRT1	97	65.568	ENSGAGG00000020761	SCRT2	97	65.568	Gopherus_agassizii
ENSPKIG00000022303	SCRT1	99	89.130	ENSGAGG00000011736	SCRT1	100	89.130	Gopherus_agassizii
ENSPKIG00000022303	SCRT1	99	77.517	ENSHBUG00000019101	-	99	77.517	Haplochromis_burtoni
ENSPKIG00000022303	SCRT1	97	70.652	ENSHBUG00000012492	scrt2	96	70.652	Haplochromis_burtoni
ENSPKIG00000022303	SCRT1	100	87.900	ENSHBUG00000016621	scrt1b	100	87.900	Haplochromis_burtoni
ENSPKIG00000022303	SCRT1	97	67.235	ENSHCOG00000008116	scrt2	97	67.235	Hippocampus_comes
ENSPKIG00000022303	SCRT1	99	70.345	ENSHCOG00000016179	-	99	70.345	Hippocampus_comes
ENSPKIG00000022303	SCRT1	100	86.071	ENSHCOG00000016704	scrt1b	100	86.071	Hippocampus_comes
ENSPKIG00000022303	SCRT1	99	87.410	ENSIPUG00000004551	scrt1a	99	87.410	Ictalurus_punctatus
ENSPKIG00000022303	SCRT1	98	77.737	ENSIPUG00000005547	-	99	77.737	Ictalurus_punctatus
ENSPKIG00000022303	SCRT1	51	83.688	ENSSTOG00000032944	SCRT2	82	79.739	Ictidomys_tridecemlineatus
ENSPKIG00000022303	SCRT1	100	87.900	ENSKMAG00000005484	scrt1b	100	87.900	Kryptolebias_marmoratus
ENSPKIG00000022303	SCRT1	97	66.990	ENSKMAG00000018087	scrt2	97	66.990	Kryptolebias_marmoratus
ENSPKIG00000022303	SCRT1	99	74.916	ENSKMAG00000009489	-	99	76.589	Kryptolebias_marmoratus
ENSPKIG00000022303	SCRT1	97	66.452	ENSLBEG00000015419	scrt2	97	66.452	Labrus_bergylta
ENSPKIG00000022303	SCRT1	99	75.503	ENSLBEG00000023388	-	99	76.174	Labrus_bergylta
ENSPKIG00000022303	SCRT1	100	90.681	ENSLACG00000003588	SCRT1	99	90.681	Latimeria_chalumnae
ENSPKIG00000022303	SCRT1	100	93.548	ENSLOCG00000007573	scrt1b	100	93.548	Lepisosteus_oculatus
ENSPKIG00000022303	SCRT1	97	55.987	ENSLOCG00000002246	scrt2	97	55.987	Lepisosteus_oculatus
ENSPKIG00000022303	SCRT1	96	92.593	ENSMFAG00000035496	SCRT1	95	87.919	Macaca_fascicularis
ENSPKIG00000022303	SCRT1	97	67.314	ENSMAMG00000001291	scrt2	97	67.314	Mastacembelus_armatus
ENSPKIG00000022303	SCRT1	100	87.544	ENSMAMG00000011698	scrt1b	100	87.544	Mastacembelus_armatus
ENSPKIG00000022303	SCRT1	100	87.900	ENSMZEG00005005627	scrt1b	100	87.900	Maylandia_zebra
ENSPKIG00000022303	SCRT1	97	70.652	ENSMZEG00005026445	scrt2	96	70.652	Maylandia_zebra
ENSPKIG00000022303	SCRT1	99	77.517	ENSMZEG00005026702	-	99	77.517	Maylandia_zebra
ENSPKIG00000022303	SCRT1	83	70.690	ENSMGAG00000016579	SCRT2	97	70.690	Meleagris_gallopavo
ENSPKIG00000022303	SCRT1	97	66.667	ENSMMOG00000009272	scrt2	97	66.667	Mola_mola
ENSPKIG00000022303	SCRT1	99	77.181	ENSMMOG00000018345	-	99	77.181	Mola_mola
ENSPKIG00000022303	SCRT1	100	86.833	ENSMMOG00000003327	scrt1b	100	86.833	Mola_mola
ENSPKIG00000022303	SCRT1	97	69.784	ENSMALG00000013656	scrt2	96	69.784	Monopterus_albus
ENSPKIG00000022303	SCRT1	100	87.500	ENSMALG00000012704	scrt1b	100	87.500	Monopterus_albus
ENSPKIG00000022303	SCRT1	51	83.688	ENSNGAG00000020815	Scrt2	71	81.507	Nannospalax_galili
ENSPKIG00000022303	SCRT1	97	70.290	ENSNBRG00000007221	scrt2	96	70.290	Neolamprologus_brichardi
ENSPKIG00000022303	SCRT1	100	84.698	ENSNBRG00000013983	scrt1b	100	84.698	Neolamprologus_brichardi
ENSPKIG00000022303	SCRT1	99	77.181	ENSNBRG00000014882	-	99	77.181	Neolamprologus_brichardi
ENSPKIG00000022303	SCRT1	96	61.957	ENSONIG00000003152	-	96	61.957	Oreochromis_niloticus
ENSPKIG00000022303	SCRT1	97	72.549	ENSONIG00000019809	-	100	72.549	Oreochromis_niloticus
ENSPKIG00000022303	SCRT1	97	66.990	ENSONIG00000016758	scrt2	97	67.314	Oreochromis_niloticus
ENSPKIG00000022303	SCRT1	100	87.900	ENSONIG00000006007	scrt1b	100	87.900	Oreochromis_niloticus
ENSPKIG00000022303	SCRT1	100	86.833	ENSORLG00000025651	scrt1b	100	86.833	Oryzias_latipes
ENSPKIG00000022303	SCRT1	99	75.000	ENSORLG00000022825	-	99	75.000	Oryzias_latipes
ENSPKIG00000022303	SCRT1	97	66.667	ENSORLG00000024051	scrt2	97	66.667	Oryzias_latipes
ENSPKIG00000022303	SCRT1	100	86.833	ENSORLG00020012967	scrt1b	100	86.833	Oryzias_latipes_hni
ENSPKIG00000022303	SCRT1	97	66.667	ENSORLG00020011478	scrt2	97	66.667	Oryzias_latipes_hni
ENSPKIG00000022303	SCRT1	97	66.667	ENSORLG00015005524	scrt2	97	66.667	Oryzias_latipes_hsok
ENSPKIG00000022303	SCRT1	99	74.667	ENSORLG00015010104	-	99	74.667	Oryzias_latipes_hsok
ENSPKIG00000022303	SCRT1	100	86.833	ENSORLG00015019165	scrt1b	100	86.833	Oryzias_latipes_hsok
ENSPKIG00000022303	SCRT1	97	66.667	ENSOMEG00000002661	scrt2	97	66.667	Oryzias_melastigma
ENSPKIG00000022303	SCRT1	99	77.517	ENSOMEG00000000286	-	99	77.517	Oryzias_melastigma
ENSPKIG00000022303	SCRT1	100	86.833	ENSOMEG00000003925	scrt1b	100	86.833	Oryzias_melastigma
ENSPKIG00000022303	SCRT1	99	76.792	ENSPMGG00000021402	-	99	76.792	Periophthalmus_magnuspinnatus
ENSPKIG00000022303	SCRT1	97	74.101	ENSPMGG00000016561	scrt2	96	74.101	Periophthalmus_magnuspinnatus
ENSPKIG00000022303	SCRT1	100	85.000	ENSPMGG00000002260	scrt1b	100	85.000	Periophthalmus_magnuspinnatus
ENSPKIG00000022303	SCRT1	99	77.104	ENSPFOG00000005616	-	99	77.104	Poecilia_formosa
ENSPKIG00000022303	SCRT1	100	86.786	ENSPFOG00000017719	scrt1b	100	86.786	Poecilia_formosa
ENSPKIG00000022303	SCRT1	97	66.990	ENSPFOG00000007738	scrt2	97	66.990	Poecilia_formosa
ENSPKIG00000022303	SCRT1	97	71.841	ENSPLAG00000005765	scrt2	96	71.841	Poecilia_latipinna
ENSPKIG00000022303	SCRT1	99	77.104	ENSPLAG00000011718	-	99	77.104	Poecilia_latipinna
ENSPKIG00000022303	SCRT1	100	86.786	ENSPLAG00000009876	scrt1b	100	86.786	Poecilia_latipinna
ENSPKIG00000022303	SCRT1	99	77.104	ENSPMEG00000011706	-	99	77.104	Poecilia_mexicana
ENSPKIG00000022303	SCRT1	100	86.786	ENSPMEG00000013274	scrt1b	100	86.786	Poecilia_mexicana
ENSPKIG00000022303	SCRT1	97	71.841	ENSPMEG00000001538	scrt2	96	71.841	Poecilia_mexicana
ENSPKIG00000022303	SCRT1	97	66.990	ENSPREG00000001147	scrt2	97	66.990	Poecilia_reticulata
ENSPKIG00000022303	SCRT1	99	76.431	ENSPREG00000012166	-	99	76.431	Poecilia_reticulata
ENSPKIG00000022303	SCRT1	100	86.786	ENSPREG00000018985	scrt1b	100	86.786	Poecilia_reticulata
ENSPKIG00000022303	SCRT1	97	70.652	ENSPNYG00000013109	scrt2	96	70.652	Pundamilia_nyererei
ENSPKIG00000022303	SCRT1	99	77.517	ENSPNYG00000008865	-	99	77.517	Pundamilia_nyererei
ENSPKIG00000022303	SCRT1	100	87.900	ENSPNYG00000017733	scrt1b	100	87.900	Pundamilia_nyererei
ENSPKIG00000022303	SCRT1	98	84.727	ENSPNAG00000027880	-	99	84.727	Pygocentrus_nattereri
ENSPKIG00000022303	SCRT1	100	88.530	ENSPNAG00000017415	scrt1a	100	88.530	Pygocentrus_nattereri
ENSPKIG00000022303	SCRT1	100	92.473	ENSSFOG00015001195	SCRT1	100	92.473	Scleropages_formosus
ENSPKIG00000022303	SCRT1	99	76.000	ENSSMAG00000005122	-	99	76.000	Scophthalmus_maximus
ENSPKIG00000022303	SCRT1	99	86.380	ENSSMAG00000019207	scrt1b	99	86.380	Scophthalmus_maximus
ENSPKIG00000022303	SCRT1	99	78.188	ENSSDUG00000013215	-	99	78.188	Seriola_dumerili
ENSPKIG00000022303	SCRT1	100	88.256	ENSSDUG00000007752	scrt1b	100	88.256	Seriola_dumerili
ENSPKIG00000022303	SCRT1	98	66.330	ENSSDUG00000001637	scrt2	96	66.330	Seriola_dumerili
ENSPKIG00000022303	SCRT1	100	88.256	ENSSLDG00000017166	scrt1b	100	88.256	Seriola_lalandi_dorsalis
ENSPKIG00000022303	SCRT1	97	66.667	ENSSLDG00000013565	scrt2	97	66.667	Seriola_lalandi_dorsalis
ENSPKIG00000022303	SCRT1	99	78.188	ENSSLDG00000016454	-	99	78.188	Seriola_lalandi_dorsalis
ENSPKIG00000022303	SCRT1	97	67.897	ENSSPUG00000018637	SCRT2	97	67.897	Sphenodon_punctatus
ENSPKIG00000022303	SCRT1	97	70.290	ENSSPAG00000014018	scrt2	96	70.290	Stegastes_partitus
ENSPKIG00000022303	SCRT1	99	76.510	ENSSPAG00000006788	-	99	78.188	Stegastes_partitus
ENSPKIG00000022303	SCRT1	100	88.256	ENSSPAG00000002200	scrt1b	100	88.256	Stegastes_partitus
ENSPKIG00000022303	SCRT1	83	71.983	ENSTGUG00000006801	SCRT2	99	71.983	Taeniopygia_guttata
ENSPKIG00000022303	SCRT1	86	78.189	ENSTRUG00000019558	-	81	78.189	Takifugu_rubripes
ENSPKIG00000022303	SCRT1	99	77.104	ENSTRUG00000012719	-	99	77.104	Takifugu_rubripes
ENSPKIG00000022303	SCRT1	98	85.507	ENSTRUG00000011637	scrt1b	99	85.507	Takifugu_rubripes
ENSPKIG00000022303	SCRT1	97	68.729	ENSTRUG00000007620	scrt2	97	68.729	Takifugu_rubripes
ENSPKIG00000022303	SCRT1	100	85.053	ENSTNIG00000018384	scrt1b	100	85.053	Tetraodon_nigroviridis
ENSPKIG00000022303	SCRT1	97	72.760	ENSTNIG00000012473	scrt2	97	72.760	Tetraodon_nigroviridis
ENSPKIG00000022303	SCRT1	100	86.429	ENSXCOG00000019675	scrt1b	100	86.429	Xiphophorus_couchianus
ENSPKIG00000022303	SCRT1	97	68.350	ENSXCOG00000014367	scrt2	97	68.350	Xiphophorus_couchianus
ENSPKIG00000022303	SCRT1	99	75.972	ENSXCOG00000019861	-	99	75.972	Xiphophorus_couchianus
ENSPKIG00000022303	SCRT1	99	76.768	ENSXMAG00000015353	-	99	76.768	Xiphophorus_maculatus
ENSPKIG00000022303	SCRT1	97	67.314	ENSXMAG00000028567	scrt2	97	67.314	Xiphophorus_maculatus
ENSPKIG00000022303	SCRT1	100	86.429	ENSXMAG00000027885	scrt1b	100	86.429	Xiphophorus_maculatus