EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000022408 (Gene tree)
Gene ID: -
Gene Symbol: scaf4a
Alias: -
Full Name: SR-related CTD-associated factor 4a
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 14380 bases
Position: chrPGUA01000079.1:1406473-1420852
Accession: ZDB-GENE-030131-9003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000005925	RRM_1	PF00076.22	2.9e-07	1	1
ENSPKIP00000005949	RRM_1	PF00076.22	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000029999	-	492	-	ENSPKIP00000005982	163 (aa)	-	-
ENSPKIT00000029966	-	2698	-	ENSPKIP00000005949	702 (aa)	-	-
ENSPKIT00000029940	-	2563	-	ENSPKIP00000005925	717 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000022408's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000022408's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000022408	scaf4a	90	66.966	ENSG00000156304	SCAF4	66	64.512	Homo_sapiens
ENSPKIG00000022408	scaf4a	99	64.354	ENSAPOG00000002946	scaf4a	61	65.890	Acanthochromis_polyacanthus
ENSPKIG00000022408	scaf4a	73	60.684	ENSAPOG00000019615	scaf4b	58	65.641	Acanthochromis_polyacanthus
ENSPKIG00000022408	scaf4a	99	49.231	ENSAOCG00000010433	scaf4b	59	64.824	Amphiprion_ocellaris
ENSPKIG00000022408	scaf4a	99	63.973	ENSAOCG00000000615	scaf4a	61	65.890	Amphiprion_ocellaris
ENSPKIG00000022408	scaf4a	70	61.172	ENSAPEG00000010913	scaf4b	59	64.824	Amphiprion_percula
ENSPKIG00000022408	scaf4a	99	63.836	ENSAPEG00000021229	scaf4a	61	65.753	Amphiprion_percula
ENSPKIG00000022408	scaf4a	98	49.433	ENSATEG00000011758	scaf4b	58	66.497	Anabas_testudineus
ENSPKIG00000022408	scaf4a	95	63.854	ENSAPLG00000002509	SCAF4	67	62.831	Anas_platyrhynchos
ENSPKIG00000022408	scaf4a	87	68.722	ENSACAG00000002569	SCAF4	57	67.886	Anolis_carolinensis
ENSPKIG00000022408	scaf4a	90	66.816	ENSANAG00000037494	SCAF4	64	64.380	Aotus_nancymaae
ENSPKIG00000022408	scaf4a	100	46.814	ENSACLG00000024833	scaf4b	57	68.571	Astatotilapia_calliptera
ENSPKIG00000022408	scaf4a	99	69.178	ENSAMXG00000008585	scaf4a	67	68.801	Astyanax_mexicanus
ENSPKIG00000022408	scaf4a	90	65.719	ENSBTAG00000018855	SCAF4	64	63.144	Bos_taurus
ENSPKIG00000022408	scaf4a	90	67.066	ENSCJAG00000008993	SCAF4	88	64.597	Callithrix_jacchus
ENSPKIG00000022408	scaf4a	89	65.753	ENSCAFG00000008863	SCAF4	64	63.003	Canis_familiaris
ENSPKIG00000022408	scaf4a	88	64.462	ENSCAFG00020026019	SCAF4	75	65.517	Canis_lupus_dingo
ENSPKIG00000022408	scaf4a	90	65.727	ENSCHIG00000008385	SCAF4	65	63.041	Capra_hircus
ENSPKIG00000022408	scaf4a	89	67.388	ENSTSYG00000011344	SCAF4	69	64.402	Carlito_syrichta
ENSPKIG00000022408	scaf4a	90	65.333	ENSCPOG00000012443	SCAF4	65	62.565	Cavia_porcellus
ENSPKIG00000022408	scaf4a	90	66.766	ENSCCAG00000033727	SCAF4	64	64.333	Cebus_capucinus
ENSPKIG00000022408	scaf4a	90	66.667	ENSCATG00000030379	SCAF4	64	64.248	Cercocebus_atys
ENSPKIG00000022408	scaf4a	88	64.414	ENSCLAG00000006298	SCAF4	64	62.252	Chinchilla_lanigera
ENSPKIG00000022408	scaf4a	90	66.716	ENSCSAG00000009438	SCAF4	64	64.295	Chlorocebus_sabaeus
ENSPKIG00000022408	scaf4a	91	66.320	ENSCANG00000029847	SCAF4	64	64.380	Colobus_angolensis_palliatus
ENSPKIG00000022408	scaf4a	89	61.442	ENSCGRG00001020821	Scaf4	66	58.578	Cricetulus_griseus_chok1gshd
ENSPKIG00000022408	scaf4a	88	61.506	ENSCGRG00000014360	Scaf4	66	59.181	Cricetulus_griseus_crigri
ENSPKIG00000022408	scaf4a	72	58.447	ENSCSEG00000012808	-	56	67.485	Cynoglossus_semilaevis
ENSPKIG00000022408	scaf4a	99	62.449	ENSCSEG00000019549	scaf4a	56	53.305	Cynoglossus_semilaevis
ENSPKIG00000022408	scaf4a	72	60.364	ENSCVAG00000009142	scaf4b	58	63.212	Cyprinodon_variegatus
ENSPKIG00000022408	scaf4a	64	87.288	ENSETEG00000000583	SCAF4	55	59.514	Echinops_telfairi
ENSPKIG00000022408	scaf4a	68	55.000	ENSEBUG00000003891	SCAF8	56	56.134	Eptatretus_burgeri
ENSPKIG00000022408	scaf4a	90	66.018	ENSEASG00005007756	SCAF4	64	63.408	Equus_asinus_asinus
ENSPKIG00000022408	scaf4a	90	66.018	ENSECAG00000014248	SCAF4	64	63.408	Equus_caballus
ENSPKIG00000022408	scaf4a	71	55.254	ENSELUG00000002779	SCAF8	81	52.893	Esox_lucius
ENSPKIG00000022408	scaf4a	54	81.218	ENSELUG00000009909	scaf4a	52	83.673	Esox_lucius
ENSPKIG00000022408	scaf4a	90	65.727	ENSFCAG00000002228	SCAF4	65	63.529	Felis_catus
ENSPKIG00000022408	scaf4a	88	61.877	ENSFDAG00000017780	SCAF4	64	59.274	Fukomys_damarensis
ENSPKIG00000022408	scaf4a	69	62.162	ENSFHEG00000007634	scaf4b	59	64.322	Fundulus_heteroclitus
ENSPKIG00000022408	scaf4a	99	62.803	ENSFHEG00000017866	scaf4a	56	63.073	Fundulus_heteroclitus
ENSPKIG00000022408	scaf4a	96	64.236	ENSGALG00000033965	SCAF4	66	63.061	Gallus_gallus
ENSPKIG00000022408	scaf4a	99	65.400	ENSGAFG00000019460	scaf4a	77	64.179	Gambusia_affinis
ENSPKIG00000022408	scaf4a	83	65.657	ENSGACG00000020580	scaf4a	64	66.953	Gasterosteus_aculeatus
ENSPKIG00000022408	scaf4a	97	63.563	ENSGGOG00000015557	SCAF4	72	62.781	Gorilla_gorilla
ENSPKIG00000022408	scaf4a	99	65.984	ENSHBUG00000007920	scaf4a	60	65.574	Haplochromis_burtoni
ENSPKIG00000022408	scaf4a	90	63.690	ENSHGLG00000010582	SCAF4	65	61.788	Heterocephalus_glaber_female
ENSPKIG00000022408	scaf4a	88	62.930	ENSHGLG00100009441	SCAF4	65	61.082	Heterocephalus_glaber_male
ENSPKIG00000022408	scaf4a	99	69.315	ENSIPUG00000011285	scaf4	68	73.077	Ictalurus_punctatus
ENSPKIG00000022408	scaf4a	64	59.140	ENSIPUG00000019311	-	62	59.091	Ictalurus_punctatus
ENSPKIG00000022408	scaf4a	77	79.747	ENSSTOG00000004450	SCAF4	62	56.150	Ictidomys_tridecemlineatus
ENSPKIG00000022408	scaf4a	89	64.427	ENSJJAG00000019447	Scaf4	64	62.366	Jaculus_jaculus
ENSPKIG00000022408	scaf4a	68	63.426	ENSKMAG00000005742	scaf4b	58	65.128	Kryptolebias_marmoratus
ENSPKIG00000022408	scaf4a	96	63.585	ENSLBEG00000014675	scaf4a	61	63.352	Labrus_bergylta
ENSPKIG00000022408	scaf4a	99	76.944	ENSLOCG00000009162	scaf4a	65	76.667	Lepisosteus_oculatus
ENSPKIG00000022408	scaf4a	90	66.058	ENSLAFG00000010710	SCAF4	65	63.405	Loxodonta_africana
ENSPKIG00000022408	scaf4a	90	66.667	ENSMFAG00000037668	SCAF4	64	64.248	Macaca_fascicularis
ENSPKIG00000022408	scaf4a	90	66.667	ENSMMUG00000001712	SCAF4	64	64.248	Macaca_mulatta
ENSPKIG00000022408	scaf4a	90	66.517	ENSMNEG00000032966	SCAF4	64	63.984	Macaca_nemestrina
ENSPKIG00000022408	scaf4a	89	66.161	ENSMLEG00000039674	SCAF4	64	63.770	Mandrillus_leucophaeus
ENSPKIG00000022408	scaf4a	99	65.621	ENSMZEG00005024349	scaf4a	61	65.211	Maylandia_zebra
ENSPKIG00000022408	scaf4a	95	63.357	ENSMGAG00000014515	SCAF4	66	62.683	Meleagris_gallopavo
ENSPKIG00000022408	scaf4a	86	62.520	ENSMAUG00000013307	Scaf4	64	62.903	Mesocricetus_auratus
ENSPKIG00000022408	scaf4a	90	66.916	ENSMICG00000005256	SCAF4	64	64.729	Microcebus_murinus
ENSPKIG00000022408	scaf4a	73	77.914	ENSMOCG00000012087	Scaf4	66	58.701	Microtus_ochrogaster
ENSPKIG00000022408	scaf4a	90	67.485	ENSMODG00000021040	SCAF4	65	64.785	Monodelphis_domestica
ENSPKIG00000022408	scaf4a	71	70.242	ENSMALG00000013825	scaf4a	52	68.182	Monopterus_albus
ENSPKIG00000022408	scaf4a	77	79.747	MGP_CAROLIEiJ_G0020944	Scaf4	56	66.397	Mus_caroli
ENSPKIG00000022408	scaf4a	90	64.318	ENSMPUG00000001078	SCAF4	64	61.640	Mustela_putorius_furo
ENSPKIG00000022408	scaf4a	90	65.723	ENSNGAG00000005214	Scaf4	64	63.081	Nannospalax_galili
ENSPKIG00000022408	scaf4a	90	66.816	ENSNLEG00000003569	SCAF4	64	64.248	Nomascus_leucogenys
ENSPKIG00000022408	scaf4a	86	60.247	ENSODEG00000002718	SCAF4	65	60.334	Octodon_degus
ENSPKIG00000022408	scaf4a	99	65.894	ENSONIG00000004687	scaf4a	69	63.249	Oreochromis_niloticus
ENSPKIG00000022408	scaf4a	61	76.923	ENSONIG00000005610	scaf4b	66	78.986	Oreochromis_niloticus
ENSPKIG00000022408	scaf4a	90	66.865	ENSOCUG00000008336	SCAF4	65	64.173	Oryctolagus_cuniculus
ENSPKIG00000022408	scaf4a	99	62.331	ENSORLG00000004384	scaf4a	59	62.973	Oryzias_latipes
ENSPKIG00000022408	scaf4a	70	58.850	ENSORLG00000003420	scaf4b	53	78.417	Oryzias_latipes
ENSPKIG00000022408	scaf4a	72	57.554	ENSORLG00020013853	scaf4b	53	77.698	Oryzias_latipes_hni
ENSPKIG00000022408	scaf4a	99	62.364	ENSORLG00015017880	scaf4a	59	63.008	Oryzias_latipes_hsok
ENSPKIG00000022408	scaf4a	99	63.847	ENSOMEG00000014482	scaf4a	58	63.821	Oryzias_melastigma
ENSPKIG00000022408	scaf4a	88	68.647	ENSOGAG00000014653	SCAF4	60	62.500	Otolemur_garnettii
ENSPKIG00000022408	scaf4a	88	64.608	ENSOARG00000013894	SCAF4	64	62.024	Ovis_aries
ENSPKIG00000022408	scaf4a	90	66.966	ENSPPAG00000028535	SCAF4	64	64.512	Pan_paniscus
ENSPKIG00000022408	scaf4a	89	65.408	ENSPPRG00000000635	SCAF4	64	62.815	Panthera_pardus
ENSPKIG00000022408	scaf4a	89	66.512	ENSPTIG00000021578	SCAF4	65	63.464	Panthera_tigris_altaica
ENSPKIG00000022408	scaf4a	90	66.966	ENSPTRG00000013848	SCAF4	64	64.512	Pan_troglodytes
ENSPKIG00000022408	scaf4a	90	66.667	ENSPANG00000017332	SCAF4	64	64.248	Papio_anubis
ENSPKIG00000022408	scaf4a	98	63.237	ENSPSIG00000014242	SCAF4	64	63.961	Pelodiscus_sinensis
ENSPKIG00000022408	scaf4a	90	66.358	ENSPCIG00000028183	SCAF4	61	64.218	Phascolarctos_cinereus
ENSPKIG00000022408	scaf4a	99	63.859	ENSPFOG00000017156	scaf4a	72	58.696	Poecilia_formosa
ENSPKIG00000022408	scaf4a	99	65.129	ENSPLAG00000001972	scaf4a	84	63.908	Poecilia_latipinna
ENSPKIG00000022408	scaf4a	72	60.352	ENSPLAG00000004403	-	56	64.103	Poecilia_latipinna
ENSPKIG00000022408	scaf4a	72	60.793	ENSPMEG00000006666	-	57	64.615	Poecilia_mexicana
ENSPKIG00000022408	scaf4a	71	61.818	ENSPREG00000013510	scaf4b	56	64.615	Poecilia_reticulata
ENSPKIG00000022408	scaf4a	90	66.816	ENSPPYG00000011355	SCAF4	64	64.380	Pongo_abelii
ENSPKIG00000022408	scaf4a	62	78.528	ENSPCAG00000009998	SCAF4	66	60.686	Procavia_capensis
ENSPKIG00000022408	scaf4a	90	65.425	ENSPCOG00000018710	SCAF4	65	64.706	Propithecus_coquereli
ENSPKIG00000022408	scaf4a	90	66.467	ENSPVAG00000005220	SCAF4	65	63.206	Pteropus_vampyrus
ENSPKIG00000022408	scaf4a	100	46.676	ENSPNYG00000010526	scaf4b	57	68.571	Pundamilia_nyererei
ENSPKIG00000022408	scaf4a	99	72.690	ENSPNAG00000016892	scaf4a	66	72.414	Pygocentrus_nattereri
ENSPKIG00000022408	scaf4a	72	79.114	ENSRNOG00000002104	Scaf4	63	72.619	Rattus_norvegicus
ENSPKIG00000022408	scaf4a	88	65.934	ENSRBIG00000040007	SCAF4	62	60.000	Rhinopithecus_bieti
ENSPKIG00000022408	scaf4a	90	66.667	ENSRROG00000029488	SCAF4	64	64.248	Rhinopithecus_roxellana
ENSPKIG00000022408	scaf4a	91	66.058	ENSSHAG00000001581	SCAF4	67	64.423	Sarcophilus_harrisii
ENSPKIG00000022408	scaf4a	83	78.401	ENSSFOG00015006338	scaf4a	60	78.547	Scleropages_formosus
ENSPKIG00000022408	scaf4a	100	52.420	ENSSMAG00000003738	scaf4b	62	58.696	Scophthalmus_maximus
ENSPKIG00000022408	scaf4a	99	62.826	ENSSMAG00000017901	scaf4a	58	62.791	Scophthalmus_maximus
ENSPKIG00000022408	scaf4a	78	60.793	ENSSDUG00000012380	scaf4b	58	65.285	Seriola_dumerili
ENSPKIG00000022408	scaf4a	99	65.442	ENSSDUG00000012918	scaf4a	60	66.033	Seriola_dumerili
ENSPKIG00000022408	scaf4a	99	65.757	ENSSLDG00000021671	scaf4a	60	66.349	Seriola_lalandi_dorsalis
ENSPKIG00000022408	scaf4a	78	60.793	ENSSLDG00000023152	-	58	65.285	Seriola_lalandi_dorsalis
ENSPKIG00000022408	scaf4a	90	65.309	ENSSARG00000009994	SCAF4	64	63.648	Sorex_araneus
ENSPKIG00000022408	scaf4a	90	65.929	ENSSSCG00000021023	SCAF4	66	63.364	Sus_scrofa
ENSPKIG00000022408	scaf4a	94	64.444	ENSTGUG00000013464	SCAF4	65	63.568	Taeniopygia_guttata
ENSPKIG00000022408	scaf4a	71	59.341	ENSTRUG00000009536	-	59	65.761	Takifugu_rubripes
ENSPKIG00000022408	scaf4a	89	65.449	ENSTTRG00000010963	SCAF4	64	63.003	Tursiops_truncatus
ENSPKIG00000022408	scaf4a	90	66.567	ENSUAMG00000008860	SCAF4	66	63.852	Ursus_americanus
ENSPKIG00000022408	scaf4a	88	66.876	ENSUMAG00000016962	SCAF4	64	64.120	Ursus_maritimus
ENSPKIG00000022408	scaf4a	53	61.780	ENSVPAG00000012465	SCAF8	51	60.622	Vicugna_pacos
ENSPKIG00000022408	scaf4a	88	65.644	ENSVVUG00000002953	SCAF4	64	62.888	Vulpes_vulpes
ENSPKIG00000022408	scaf4a	99	57.179	ENSXETG00000007351	scaf4	66	53.121	Xenopus_tropicalis