EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000022450 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: si:ch211-153b23.3
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 4158 bases
Position: chrPGUA01000156.1:672420-676577
Accession: ZDB-GENE-141216-408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000005996	Sua5_yciO_yrdC	PF01300.18	3.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000030013	-	2520	-	ENSPKIP00000005996	840 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000022450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000022450's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000022450	si:ch211-153b23.3	99	51.672	ENSPKIG00000021029	-	96	51.959
ENSPKIG00000022450	si:ch211-153b23.3	57	32.072	ENSPKIG00000014429	si:ch211-153b23.4	59	32.072

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000022450	si:ch211-153b23.3	93	95.035	ENSACIG00000006968	si:ch211-153b23.3	97	95.035	Amphilophus_citrinellus
ENSPKIG00000022450	si:ch211-153b23.3	100	71.628	ENSAOCG00000010974	si:ch211-153b23.3	97	71.628	Amphiprion_ocellaris
ENSPKIG00000022450	si:ch211-153b23.3	100	71.977	ENSAPEG00000014700	si:ch211-153b23.3	97	71.977	Amphiprion_percula
ENSPKIG00000022450	si:ch211-153b23.3	100	71.991	ENSATEG00000004956	si:ch211-153b23.3	97	71.991	Anabas_testudineus
ENSPKIG00000022450	si:ch211-153b23.3	53	35.604	ENSAPLG00000013596	-	53	35.604	Anas_platyrhynchos
ENSPKIG00000022450	si:ch211-153b23.3	100	71.795	ENSACLG00000005894	si:ch211-153b23.3	97	71.795	Astatotilapia_calliptera
ENSPKIG00000022450	si:ch211-153b23.3	56	32.657	ENSACLG00000005471	si:ch211-153b23.4	55	32.657	Astatotilapia_calliptera
ENSPKIG00000022450	si:ch211-153b23.3	100	74.323	ENSAMXG00000038564	si:ch211-153b23.3	97	74.558	Astyanax_mexicanus
ENSPKIG00000022450	si:ch211-153b23.3	100	70.915	ENSCSEG00000014853	si:ch211-153b23.3	97	70.915	Cynoglossus_semilaevis
ENSPKIG00000022450	si:ch211-153b23.3	100	72.410	ENSCVAG00000021124	si:ch211-153b23.3	97	72.410	Cyprinodon_variegatus
ENSPKIG00000022450	si:ch211-153b23.3	100	72.579	ENSDARG00000104919	si:ch211-153b23.3	97	72.579	Danio_rerio
ENSPKIG00000022450	si:ch211-153b23.3	82	84.375	ENSELUG00000004912	si:ch211-153b23.3	96	84.375	Esox_lucius
ENSPKIG00000022450	si:ch211-153b23.3	56	33.925	ENSFALG00000011343	-	56	33.925	Ficedula_albicollis
ENSPKIG00000022450	si:ch211-153b23.3	100	72.727	ENSFHEG00000010030	si:ch211-153b23.3	97	72.727	Fundulus_heteroclitus
ENSPKIG00000022450	si:ch211-153b23.3	58	32.596	ENSFHEG00000010001	si:ch211-153b23.4	60	32.596	Fundulus_heteroclitus
ENSPKIG00000022450	si:ch211-153b23.3	100	72.145	ENSGAFG00000007455	si:ch211-153b23.3	97	72.145	Gambusia_affinis
ENSPKIG00000022450	si:ch211-153b23.3	59	30.952	ENSGAGG00000024601	-	64	31.174	Gopherus_agassizii
ENSPKIG00000022450	si:ch211-153b23.3	100	71.329	ENSHBUG00000001760	si:ch211-153b23.3	97	71.329	Haplochromis_burtoni
ENSPKIG00000022450	si:ch211-153b23.3	55	32.238	ENSHBUG00000000013	si:ch211-153b23.4	64	32.238	Haplochromis_burtoni
ENSPKIG00000022450	si:ch211-153b23.3	100	73.436	ENSIPUG00000015213	si:ch211-153b23.3	97	73.436	Ictalurus_punctatus
ENSPKIG00000022450	si:ch211-153b23.3	58	33.667	ENSKMAG00000006919	-	55	33.467	Kryptolebias_marmoratus
ENSPKIG00000022450	si:ch211-153b23.3	58	33.600	ENSKMAG00000006829	si:ch211-153b23.4	59	33.600	Kryptolebias_marmoratus
ENSPKIG00000022450	si:ch211-153b23.3	100	71.329	ENSKMAG00000006792	si:ch211-153b23.3	97	71.329	Kryptolebias_marmoratus
ENSPKIG00000022450	si:ch211-153b23.3	100	70.814	ENSLBEG00000026324	si:ch211-153b23.3	97	70.814	Labrus_bergylta
ENSPKIG00000022450	si:ch211-153b23.3	94	58.065	ENSLACG00000005800	-	96	58.065	Latimeria_chalumnae
ENSPKIG00000022450	si:ch211-153b23.3	53	36.184	ENSLACG00000017592	si:ch211-153b23.4	53	36.184	Latimeria_chalumnae
ENSPKIG00000022450	si:ch211-153b23.3	88	59.184	ENSLOCG00000015063	si:ch211-153b23.3	98	59.184	Lepisosteus_oculatus
ENSPKIG00000022450	si:ch211-153b23.3	100	71.147	ENSMAMG00000009328	si:ch211-153b23.3	97	71.147	Mastacembelus_armatus
ENSPKIG00000022450	si:ch211-153b23.3	56	32.317	ENSMZEG00005011433	si:ch211-153b23.4	59	32.317	Maylandia_zebra
ENSPKIG00000022450	si:ch211-153b23.3	100	71.911	ENSMZEG00005011450	si:ch211-153b23.3	97	72.112	Maylandia_zebra
ENSPKIG00000022450	si:ch211-153b23.3	53	34.505	ENSMGAG00000005478	-	53	34.505	Meleagris_gallopavo
ENSPKIG00000022450	si:ch211-153b23.3	100	71.879	ENSMMOG00000004436	si:ch211-153b23.3	97	71.995	Mola_mola
ENSPKIG00000022450	si:ch211-153b23.3	100	72.145	ENSNBRG00000013370	si:ch211-153b23.3	97	72.145	Neolamprologus_brichardi
ENSPKIG00000022450	si:ch211-153b23.3	56	32.317	ENSNBRG00000013392	si:ch211-153b23.4	61	32.317	Neolamprologus_brichardi
ENSPKIG00000022450	si:ch211-153b23.3	56	32.454	ENSONIG00000017875	si:ch211-153b23.4	56	32.454	Oreochromis_niloticus
ENSPKIG00000022450	si:ch211-153b23.3	100	70.409	ENSORLG00000006161	si:ch211-153b23.3	97	70.409	Oryzias_latipes
ENSPKIG00000022450	si:ch211-153b23.3	58	32.860	ENSORLG00000006169	si:ch211-153b23.4	55	32.657	Oryzias_latipes
ENSPKIG00000022450	si:ch211-153b23.3	100	71.564	ENSORLG00020000910	si:ch211-153b23.3	100	71.564	Oryzias_latipes_hni
ENSPKIG00000022450	si:ch211-153b23.3	58	33.063	ENSORLG00020009905	si:ch211-153b23.4	55	32.860	Oryzias_latipes_hni
ENSPKIG00000022450	si:ch211-153b23.3	58	33.266	ENSORLG00015003709	si:ch211-153b23.4	55	33.063	Oryzias_latipes_hsok
ENSPKIG00000022450	si:ch211-153b23.3	100	70.671	ENSORLG00015003698	si:ch211-153b23.3	100	70.671	Oryzias_latipes_hsok
ENSPKIG00000022450	si:ch211-153b23.3	100	71.429	ENSOMEG00000007661	si:ch211-153b23.3	97	71.429	Oryzias_melastigma
ENSPKIG00000022450	si:ch211-153b23.3	84	76.412	ENSPMGG00000001311	si:ch211-153b23.3	96	76.412	Periophthalmus_magnuspinnatus
ENSPKIG00000022450	si:ch211-153b23.3	100	71.594	ENSPFOG00000012289	si:ch211-153b23.3	97	71.594	Poecilia_formosa
ENSPKIG00000022450	si:ch211-153b23.3	100	72.125	ENSPLAG00000016320	si:ch211-153b23.3	97	72.125	Poecilia_latipinna
ENSPKIG00000022450	si:ch211-153b23.3	50	35.129	ENSPLAG00000016295	si:ch211-153b23.4	52	35.748	Poecilia_latipinna
ENSPKIG00000022450	si:ch211-153b23.3	100	71.860	ENSPMEG00000008884	si:ch211-153b23.3	97	71.860	Poecilia_mexicana
ENSPKIG00000022450	si:ch211-153b23.3	100	71.445	ENSPNYG00000000251	si:ch211-153b23.3	97	71.445	Pundamilia_nyererei
ENSPKIG00000022450	si:ch211-153b23.3	56	32.317	ENSPNYG00000000250	si:ch211-153b23.4	59	32.317	Pundamilia_nyererei
ENSPKIG00000022450	si:ch211-153b23.3	100	76.491	ENSPNAG00000019592	si:ch211-153b23.3	97	76.491	Pygocentrus_nattereri
ENSPKIG00000022450	si:ch211-153b23.3	53	32.450	ENSSFOG00015003920	-	50	32.450	Scleropages_formosus
ENSPKIG00000022450	si:ch211-153b23.3	69	52.951	ENSSFOG00015009030	-	92	52.951	Scleropages_formosus
ENSPKIG00000022450	si:ch211-153b23.3	100	80.165	ENSSFOG00015010910	si:ch211-153b23.3	97	80.165	Scleropages_formosus
ENSPKIG00000022450	si:ch211-153b23.3	100	71.263	ENSSMAG00000005446	si:ch211-153b23.3	98	71.263	Scophthalmus_maximus
ENSPKIG00000022450	si:ch211-153b23.3	100	72.254	ENSSLDG00000008629	si:ch211-153b23.3	97	72.254	Seriola_lalandi_dorsalis
ENSPKIG00000022450	si:ch211-153b23.3	56	32.932	ENSTGUG00000005499	-	58	33.197	Taeniopygia_guttata
ENSPKIG00000022450	si:ch211-153b23.3	99	69.787	ENSTRUG00000020530	si:ch211-153b23.3	97	70.379	Takifugu_rubripes
ENSPKIG00000022450	si:ch211-153b23.3	92	80.498	ENSTNIG00000008962	si:ch211-153b23.3	96	80.498	Tetraodon_nigroviridis
ENSPKIG00000022450	si:ch211-153b23.3	53	32.969	ENSTNIG00000008958	si:ch211-153b23.4	54	32.969	Tetraodon_nigroviridis
ENSPKIG00000022450	si:ch211-153b23.3	59	33.531	ENSXETG00000004489	-	54	33.531	Xenopus_tropicalis
ENSPKIG00000022450	si:ch211-153b23.3	56	33.065	ENSXMAG00000021388	si:ch211-153b23.4	58	33.266	Xiphophorus_maculatus
ENSPKIG00000022450	si:ch211-153b23.3	100	72.706	ENSXMAG00000029318	si:ch211-153b23.3	97	72.706	Xiphophorus_maculatus