EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000022633 (Gene tree)
Gene ID: 111856763
Gene Symbol: -
Alias: -
Full Name: RNA binding protein fox-1 homolog 3-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 31148 bases
Position: chrPGUA01000314.1:29574-60721
Accession: 111856763
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000006315	Fox-1_C	PF12414.8	2.9e-36	1	1
ENSPKIP00000006293	Fox-1_C	PF12414.8	3.5e-36	1	1
ENSPKIP00000006293	RRM_1	PF00076.22	3.1e-18	1	1
ENSPKIP00000006315	RRM_1	PF00076.22	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000030316	-	5104	-	ENSPKIP00000006293	343 (aa)	XP_023692745	UPI000CD6365D
ENSPKIT00000030338	-	5011	-	ENSPKIP00000006315	312 (aa)	XP_023692747	UPI000CD66B9D

Gene Model

Click here to download ENSPKIG00000022633's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000022633's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000022633	-	94	59.599	ENSPKIG00000009667	-	90	61.736
ENSPKIG00000022633	-	78	61.404	ENSPKIG00000019353	rbfox1	86	64.528
ENSPKIG00000022633	-	66	68.067	ENSPKIG00000012029	rbfox1l	63	69.328
ENSPKIG00000022633	-	100	65.896	ENSPKIG00000010299	rbfox3a	98	66.279
ENSPKIG00000022633	-	71	60.000	ENSPKIG00000006854	-	77	52.778
ENSPKIG00000022633	-	66	56.391	ENSPKIG00000010816	-	73	56.134

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000022633	-	80	66.107	ENSG00000167281	RBFOX3	99	74.324	Homo_sapiens
ENSPKIG00000022633	-	97	54.062	ENSAPOG00000015658	-	84	57.778	Acanthochromis_polyacanthus
ENSPKIG00000022633	-	99	68.800	ENSAPOG00000021630	rbfox3b	90	71.930	Acanthochromis_polyacanthus
ENSPKIG00000022633	-	94	58.629	ENSAMEG00000014170	RBFOX3	98	61.082	Ailuropoda_melanoleuca
ENSPKIG00000022633	-	85	59.202	ENSACIG00000003768	-	90	60.123	Amphilophus_citrinellus
ENSPKIG00000022633	-	86	65.000	ENSACIG00000010817	rbfox3b	100	66.667	Amphilophus_citrinellus
ENSPKIG00000022633	-	97	62.772	ENSAOCG00000010786	-	96	62.740	Amphiprion_ocellaris
ENSPKIG00000022633	-	96	68.421	ENSAOCG00000012358	rbfox3b	90	71.646	Amphiprion_ocellaris
ENSPKIG00000022633	-	90	59.155	ENSAPEG00000015891	-	86	59.770	Amphiprion_percula
ENSPKIG00000022633	-	97	60.440	ENSAPEG00000019081	rbfox3b	89	62.763	Amphiprion_percula
ENSPKIG00000022633	-	86	60.286	ENSATEG00000019945	rbfox3b	100	63.218	Anabas_testudineus
ENSPKIG00000022633	-	81	65.033	ENSATEG00000023101	-	97	65.300	Anabas_testudineus
ENSPKIG00000022633	-	96	65.470	ENSACAG00000016093	RBFOX3	100	65.470	Anolis_carolinensis
ENSPKIG00000022633	-	80	65.436	ENSANAG00000023457	RBFOX3	100	68.371	Aotus_nancymaae
ENSPKIG00000022633	-	100	64.244	ENSACLG00000025552	-	98	64.820	Astatotilapia_calliptera
ENSPKIG00000022633	-	99	68.533	ENSACLG00000020011	rbfox3b	100	71.885	Astatotilapia_calliptera
ENSPKIG00000022633	-	96	66.761	ENSAMXG00000042841	rbfox3b	93	69.486	Astyanax_mexicanus
ENSPKIG00000022633	-	97	63.288	ENSAMXG00000037246	rbfox3a	98	68.693	Astyanax_mexicanus
ENSPKIG00000022633	-	69	68.504	ENSBTAG00000006280	RBFOX3	100	56.024	Bos_taurus
ENSPKIG00000022633	-	80	60.606	ENSCJAG00000009563	RBFOX3	100	59.053	Callithrix_jacchus
ENSPKIG00000022633	-	62	78.082	ENSCAFG00000005547	RBFOX3	93	73.077	Canis_familiaris
ENSPKIG00000022633	-	85	56.825	ENSCAFG00020008126	RBFOX3	100	60.695	Canis_lupus_dingo
ENSPKIG00000022633	-	85	55.710	ENSCHIG00000009124	RBFOX3	100	60.428	Capra_hircus
ENSPKIG00000022633	-	80	55.172	ENSTSYG00000029617	RBFOX3	100	59.229	Carlito_syrichta
ENSPKIG00000022633	-	85	57.735	ENSCPOG00000021703	RBFOX3	100	58.947	Cavia_porcellus
ENSPKIG00000022633	-	80	65.436	ENSCCAG00000028450	RBFOX3	100	68.371	Cebus_capucinus
ENSPKIG00000022633	-	80	66.107	ENSCATG00000018349	RBFOX3	100	69.010	Cercocebus_atys
ENSPKIG00000022633	-	85	58.056	ENSCLAG00000006449	RBFOX3	100	59.259	Chinchilla_lanigera
ENSPKIG00000022633	-	80	66.107	ENSCSAG00000002355	RBFOX3	100	69.010	Chlorocebus_sabaeus
ENSPKIG00000022633	-	92	69.048	ENSCPBG00000010904	RBFOX3	100	66.667	Chrysemys_picta_bellii
ENSPKIG00000022633	-	80	66.107	ENSCANG00000043120	RBFOX3	100	69.010	Colobus_angolensis_palliatus
ENSPKIG00000022633	-	85	55.495	ENSCGRG00001019476	Rbfox3	100	59.103	Cricetulus_griseus_chok1gshd
ENSPKIG00000022633	-	85	55.495	ENSCGRG00000003268	Rbfox3	100	59.103	Cricetulus_griseus_crigri
ENSPKIG00000022633	-	99	58.967	ENSCSEG00000020606	RBFOX3	89	60.923	Cynoglossus_semilaevis
ENSPKIG00000022633	-	97	62.670	ENSCSEG00000015567	RBFOX3	97	63.897	Cynoglossus_semilaevis
ENSPKIG00000022633	-	90	69.369	ENSCVAG00000006882	rbfox3b	88	71.472	Cyprinodon_variegatus
ENSPKIG00000022633	-	93	64.935	ENSDARG00000074310	rbfox3b	97	80.412	Danio_rerio
ENSPKIG00000022633	-	96	64.110	ENSDARG00000010083	rbfox3a	99	68.693	Danio_rerio
ENSPKIG00000022633	-	68	59.727	ENSDNOG00000039391	RBFOX3	96	56.787	Dasypus_novemcinctus
ENSPKIG00000022633	-	85	54.520	ENSDORG00000005352	Rbfox3	100	56.284	Dipodomys_ordii
ENSPKIG00000022633	-	93	58.074	ENSEBUG00000002129	RBFOX3	99	58.689	Eptatretus_burgeri
ENSPKIG00000022633	-	80	65.347	ENSEASG00005005059	RBFOX3	100	67.925	Equus_asinus_asinus
ENSPKIG00000022633	-	83	64.286	ENSECAG00000023811	RBFOX3	100	67.610	Equus_caballus
ENSPKIG00000022633	-	74	66.321	ENSEEUG00000013974	RBFOX3	78	70.588	Erinaceus_europaeus
ENSPKIG00000022633	-	99	69.437	ENSELUG00000017963	rbfox3b	100	69.257	Esox_lucius
ENSPKIG00000022633	-	96	64.624	ENSFCAG00000002555	RBFOX3	100	68.485	Felis_catus
ENSPKIG00000022633	-	92	50.124	ENSFALG00000012288	RBFOX3	98	52.357	Ficedula_albicollis
ENSPKIG00000022633	-	85	53.591	ENSFDAG00000007489	RBFOX3	100	54.737	Fukomys_damarensis
ENSPKIG00000022633	-	83	66.783	ENSFHEG00000008550	rbfox3b	100	68.662	Fundulus_heteroclitus
ENSPKIG00000022633	-	89	59.218	ENSGMOG00000019304	-	100	58.659	Gadus_morhua
ENSPKIG00000022633	-	96	63.435	ENSGALG00000032889	RBFOX3	100	65.097	Gallus_gallus
ENSPKIG00000022633	-	97	63.260	ENSGAFG00000005025	rbfox3b	88	69.707	Gambusia_affinis
ENSPKIG00000022633	-	85	57.923	ENSGACG00000002138	-	100	58.947	Gasterosteus_aculeatus
ENSPKIG00000022633	-	100	65.775	ENSGAGG00000020025	RBFOX3	100	67.203	Gopherus_agassizii
ENSPKIG00000022633	-	80	66.107	ENSGGOG00000012546	RBFOX3	100	69.010	Gorilla_gorilla
ENSPKIG00000022633	-	99	68.717	ENSHBUG00000018099	rbfox3b	90	73.156	Haplochromis_burtoni
ENSPKIG00000022633	-	92	67.836	ENSHBUG00000023098	-	98	67.251	Haplochromis_burtoni
ENSPKIG00000022633	-	85	57.027	ENSHGLG00000008679	RBFOX3	100	58.377	Heterocephalus_glaber_female
ENSPKIG00000022633	-	85	54.054	ENSHGLG00100014739	RBFOX3	100	55.497	Heterocephalus_glaber_male
ENSPKIG00000022633	-	86	59.295	ENSHCOG00000001863	RBFOX3	93	59.295	Hippocampus_comes
ENSPKIG00000022633	-	82	64.610	ENSHCOG00000007444	RBFOX3	84	64.220	Hippocampus_comes
ENSPKIG00000022633	-	85	59.593	ENSIPUG00000021966	rbfox3b	98	71.429	Ictalurus_punctatus
ENSPKIG00000022633	-	96	64.903	ENSIPUG00000012010	rbfox3a	98	69.231	Ictalurus_punctatus
ENSPKIG00000022633	-	85	53.438	ENSSTOG00000026817	RBFOX3	100	57.704	Ictidomys_tridecemlineatus
ENSPKIG00000022633	-	85	57.103	ENSJJAG00000014167	Rbfox3	100	59.682	Jaculus_jaculus
ENSPKIG00000022633	-	96	68.144	ENSKMAG00000006726	rbfox3b	90	71.646	Kryptolebias_marmoratus
ENSPKIG00000022633	-	96	68.681	ENSLBEG00000022508	-	98	68.232	Labrus_bergylta
ENSPKIG00000022633	-	99	68.800	ENSLBEG00000004030	rbfox3b	100	66.352	Labrus_bergylta
ENSPKIG00000022633	-	92	55.919	ENSLACG00000018409	-	100	57.935	Latimeria_chalumnae
ENSPKIG00000022633	-	88	68.085	ENSLOCG00000012267	rbfox3a	98	70.948	Lepisosteus_oculatus
ENSPKIG00000022633	-	92	58.718	ENSLAFG00000016623	RBFOX3	100	59.416	Loxodonta_africana
ENSPKIG00000022633	-	85	54.749	ENSMFAG00000002247	RBFOX3	100	59.610	Macaca_fascicularis
ENSPKIG00000022633	-	80	66.107	ENSMMUG00000023028	RBFOX3	100	69.010	Macaca_mulatta
ENSPKIG00000022633	-	80	66.107	ENSMNEG00000041147	RBFOX3	100	69.010	Macaca_nemestrina
ENSPKIG00000022633	-	80	66.107	ENSMLEG00000025686	RBFOX3	100	69.010	Mandrillus_leucophaeus
ENSPKIG00000022633	-	92	63.610	ENSMAMG00000020600	-	99	63.610	Mastacembelus_armatus
ENSPKIG00000022633	-	86	67.208	ENSMAMG00000019810	rbfox3b	100	67.427	Mastacembelus_armatus
ENSPKIG00000022633	-	99	68.717	ENSMZEG00005000781	rbfox3b	90	73.156	Maylandia_zebra
ENSPKIG00000022633	-	85	51.765	ENSMZEG00005003055	-	66	69.591	Maylandia_zebra
ENSPKIG00000022633	-	59	64.126	ENSMGAG00000005600	RBFOX3	83	64.574	Meleagris_gallopavo
ENSPKIG00000022633	-	85	57.143	ENSMAUG00000013543	Rbfox3	100	59.631	Mesocricetus_auratus
ENSPKIG00000022633	-	88	67.077	ENSMICG00000014898	RBFOX3	100	66.984	Microcebus_murinus
ENSPKIG00000022633	-	85	56.198	ENSMOCG00000015373	Rbfox3	100	58.995	Microtus_ochrogaster
ENSPKIG00000022633	-	96	64.208	ENSMMOG00000020193	rbfox3b	99	63.014	Mola_mola
ENSPKIG00000022633	-	96	62.707	ENSMODG00000002089	RBFOX3	100	64.088	Monodelphis_domestica
ENSPKIG00000022633	-	96	69.359	ENSMALG00000020407	rbfox3b	90	71.515	Monopterus_albus
ENSPKIG00000022633	-	100	67.109	ENSMALG00000018270	-	98	67.914	Monopterus_albus
ENSPKIG00000022633	-	85	64.873	MGP_CAROLIEiJ_G0017487	Rbfox3	96	79.137	Mus_caroli
ENSPKIG00000022633	-	85	66.772	ENSMUSG00000025576	Rbfox3	96	79.137	Mus_musculus
ENSPKIG00000022633	-	85	64.984	MGP_PahariEiJ_G0018614	Rbfox3	96	79.137	Mus_pahari
ENSPKIG00000022633	-	85	64.873	MGP_SPRETEiJ_G0018331	Rbfox3	96	79.137	Mus_spretus
ENSPKIG00000022633	-	94	60.630	ENSMPUG00000012319	RBFOX3	99	62.533	Mustela_putorius_furo
ENSPKIG00000022633	-	85	55.647	ENSNGAG00000018006	Rbfox3	100	59.524	Nannospalax_galili
ENSPKIG00000022633	-	90	68.373	ENSNBRG00000010102	rbfox3b	88	71.963	Neolamprologus_brichardi
ENSPKIG00000022633	-	89	62.462	ENSNBRG00000022885	-	90	62.997	Neolamprologus_brichardi
ENSPKIG00000022633	-	85	46.474	ENSNLEG00000000153	-	95	46.815	Nomascus_leucogenys
ENSPKIG00000022633	-	80	40.346	ENSMEUG00000004218	-	100	42.265	Notamacropus_eugenii
ENSPKIG00000022633	-	71	63.918	ENSOPRG00000016279	-	79	65.464	Ochotona_princeps
ENSPKIG00000022633	-	80	67.559	ENSODEG00000009433	RBFOX3	100	67.192	Octodon_degus
ENSPKIG00000022633	-	88	68.196	ENSONIG00000007282	-	95	67.890	Oreochromis_niloticus
ENSPKIG00000022633	-	90	69.369	ENSONIG00000009549	rbfox3b	100	64.033	Oreochromis_niloticus
ENSPKIG00000022633	-	62	61.303	ENSOCUG00000014217	RBFOX3	73	61.303	Oryctolagus_cuniculus
ENSPKIG00000022633	-	99	66.667	ENSORLG00000000905	rbfox3b	71	71.341	Oryzias_latipes
ENSPKIG00000022633	-	96	69.359	ENSORLG00020018030	rbfox3b	98	68.942	Oryzias_latipes_hni
ENSPKIG00000022633	-	96	69.638	ENSORLG00015009200	rbfox3b	99	68.440	Oryzias_latipes_hsok
ENSPKIG00000022633	-	76	64.590	ENSOMEG00000014677	rbfox3b	81	66.079	Oryzias_melastigma
ENSPKIG00000022633	-	94	60.484	ENSOGAG00000029595	RBFOX3	98	62.873	Otolemur_garnettii
ENSPKIG00000022633	-	92	49.377	ENSOARG00000002908	RBFOX3	100	52.174	Ovis_aries
ENSPKIG00000022633	-	69	69.565	ENSPPAG00000025383	RBFOX3	99	70.280	Pan_paniscus
ENSPKIG00000022633	-	80	57.692	ENSPPRG00000007819	RBFOX3	100	61.190	Panthera_pardus
ENSPKIG00000022633	-	80	66.107	ENSPTRG00000009727	RBFOX3	100	69.010	Pan_troglodytes
ENSPKIG00000022633	-	80	66.107	ENSPANG00000019837	RBFOX3	100	69.010	Papio_anubis
ENSPKIG00000022633	-	84	67.619	ENSPMGG00000008000	rbfox3b	86	70.504	Periophthalmus_magnuspinnatus
ENSPKIG00000022633	-	85	55.372	ENSPEMG00000010500	Rbfox3	100	59.259	Peromyscus_maniculatus_bairdii
ENSPKIG00000022633	-	53	65.196	ENSPMAG00000008689	rbfox3b	99	67.647	Petromyzon_marinus
ENSPKIG00000022633	-	100	53.827	ENSPCIG00000005766	RBFOX3	100	64.211	Phascolarctos_cinereus
ENSPKIG00000022633	-	94	69.741	ENSPFOG00000018294	rbfox3b	88	71.893	Poecilia_formosa
ENSPKIG00000022633	-	72	73.705	ENSPLAG00000000481	rbfox3b	77	73.705	Poecilia_latipinna
ENSPKIG00000022633	-	83	66.783	ENSPMEG00000022997	rbfox3b	100	68.310	Poecilia_mexicana
ENSPKIG00000022633	-	97	68.871	ENSPREG00000012886	rbfox3b	94	71.212	Poecilia_reticulata
ENSPKIG00000022633	-	92	60.417	ENSPPYG00000008704	RBFOX3	100	61.607	Pongo_abelii
ENSPKIG00000022633	-	80	56.105	ENSPCAG00000001401	RBFOX3	100	59.053	Procavia_capensis
ENSPKIG00000022633	-	89	53.989	ENSPCOG00000012689	RBFOX3	100	58.564	Propithecus_coquereli
ENSPKIG00000022633	-	80	50.435	ENSPVAG00000015243	RBFOX3	100	53.889	Pteropus_vampyrus
ENSPKIG00000022633	-	97	59.116	ENSPNYG00000010414	rbfox3b	89	61.261	Pundamilia_nyererei
ENSPKIG00000022633	-	97	61.050	ENSPNYG00000009079	-	95	59.341	Pundamilia_nyererei
ENSPKIG00000022633	-	100	63.830	ENSPNAG00000002889	rbfox3a	98	66.578	Pygocentrus_nattereri
ENSPKIG00000022633	-	84	63.043	ENSPNAG00000018173	rbfox3b	91	63.406	Pygocentrus_nattereri
ENSPKIG00000022633	-	80	64.356	ENSRNOG00000003386	Rbfox3	100	66.981	Rattus_norvegicus
ENSPKIG00000022633	-	96	64.067	ENSRBIG00000040449	RBFOX3	100	65.738	Rhinopithecus_bieti
ENSPKIG00000022633	-	80	66.107	ENSRROG00000000766	RBFOX3	100	69.010	Rhinopithecus_roxellana
ENSPKIG00000022633	-	80	65.436	ENSSBOG00000031591	RBFOX3	100	68.371	Saimiri_boliviensis_boliviensis
ENSPKIG00000022633	-	92	56.683	ENSSHAG00000016076	RBFOX3	100	64.211	Sarcophilus_harrisii
ENSPKIG00000022633	-	96	73.352	ENSSFOG00015004716	RBFOX3	100	73.352	Scleropages_formosus
ENSPKIG00000022633	-	92	68.222	ENSSFOG00015023260	rbfox3a	98	67.905	Scleropages_formosus
ENSPKIG00000022633	-	96	65.922	ENSSMAG00000019052	-	100	67.516	Scophthalmus_maximus
ENSPKIG00000022633	-	94	66.575	ENSSMAG00000012618	rbfox3b	77	68.513	Scophthalmus_maximus
ENSPKIG00000022633	-	83	66.783	ENSSDUG00000023183	rbfox3b	100	68.662	Seriola_dumerili
ENSPKIG00000022633	-	97	60.870	ENSSDUG00000015801	-	97	64.162	Seriola_dumerili
ENSPKIG00000022633	-	96	68.421	ENSSLDG00000000149	rbfox3b	90	71.951	Seriola_lalandi_dorsalis
ENSPKIG00000022633	-	97	63.315	ENSSLDG00000016098	-	97	63.793	Seriola_lalandi_dorsalis
ENSPKIG00000022633	-	96	64.134	ENSSPUG00000011733	RBFOX3	99	68.354	Sphenodon_punctatus
ENSPKIG00000022633	-	74	65.809	ENSSPAG00000004898	-	97	59.443	Stegastes_partitus
ENSPKIG00000022633	-	97	60.165	ENSSPAG00000017571	rbfox3b	89	62.538	Stegastes_partitus
ENSPKIG00000022633	-	75	67.647	ENSSSCG00000039498	RBFOX3	85	67.972	Sus_scrofa
ENSPKIG00000022633	-	92	67.062	ENSTRUG00000004894	rbfox3b	97	65.429	Takifugu_rubripes
ENSPKIG00000022633	-	92	59.601	ENSTNIG00000011278	rbfox3b	99	60.401	Tetraodon_nigroviridis
ENSPKIG00000022633	-	65	49.818	ENSTBEG00000004296	-	74	51.273	Tupaia_belangeri
ENSPKIG00000022633	-	80	49.709	ENSTTRG00000003676	RBFOX3	100	54.875	Tursiops_truncatus
ENSPKIG00000022633	-	80	65.781	ENSUAMG00000004668	RBFOX3	100	68.671	Ursus_americanus
ENSPKIG00000022633	-	96	64.624	ENSVVUG00000017864	RBFOX3	100	69.010	Vulpes_vulpes
ENSPKIG00000022633	-	92	54.005	ENSXETG00000020236	rbfox3	98	54.005	Xenopus_tropicalis
ENSPKIG00000022633	-	90	68.769	ENSXCOG00000018262	rbfox3b	100	66.454	Xiphophorus_couchianus
ENSPKIG00000022633	-	99	68.800	ENSXMAG00000012939	rbfox3b	100	65.714	Xiphophorus_maculatus