EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000022837 (Gene tree)
Gene ID: 111858104
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C (C1/C2)
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 4815 bases
Position: chrPGUA01000343.1:178814-183628
Accession: 111858104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000006685	RRM_1	PF00076.22	6.2e-13	1	1
ENSPKIP00000006651	RRM_1	PF00076.22	6.7e-13	1	1
ENSPKIP00000006664	RRM_1	PF00076.22	6.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000030694	-	1036	-	ENSPKIP00000006664	332 (aa)	XP_023695305	UPI000CD630CE
ENSPKIT00000030680	-	1504	-	ENSPKIP00000006651	332 (aa)	XP_023695305	UPI000CD630CE
ENSPKIT00000030715	-	954	-	ENSPKIP00000006685	317 (aa)	XP_023695308	UPI000CD5F40B

Gene Model

Click here to download ENSPKIG00000022837's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000022837's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000022837	-	98	86.262	ENSPKIG00000008592	-	98	86.262
ENSPKIG00000022837	-	71	53.191	ENSPKIG00000015926	-	79	53.390
ENSPKIG00000022837	-	83	47.744	ENSPKIG00000004894	raly	77	54.505

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000022837	-	85	52.788	ENSG00000184672	RALYL	92	79.487	Homo_sapiens
ENSPKIG00000022837	-	86	82.909	ENSAPOG00000006963	hnrnpc	92	78.125	Acanthochromis_polyacanthus
ENSPKIG00000022837	-	88	81.851	ENSACIG00000000270	-	92	78.648	Amphilophus_citrinellus
ENSPKIG00000022837	-	96	80.192	ENSACIG00000016568	-	81	86.111	Amphilophus_citrinellus
ENSPKIG00000022837	-	96	78.095	ENSAOCG00000021616	-	81	77.903	Amphiprion_ocellaris
ENSPKIG00000022837	-	86	82.909	ENSAOCG00000003896	-	92	77.778	Amphiprion_ocellaris
ENSPKIG00000022837	-	86	82.909	ENSAPEG00000001489	-	92	77.778	Amphiprion_percula
ENSPKIG00000022837	-	96	71.895	ENSAPEG00000019962	-	84	78.277	Amphiprion_percula
ENSPKIG00000022837	-	84	83.521	ENSATEG00000018006	-	79	85.780	Anabas_testudineus
ENSPKIG00000022837	-	88	81.786	ENSATEG00000011734	-	92	78.571	Anabas_testudineus
ENSPKIG00000022837	-	85	49.291	ENSAPLG00000015574	RALYL	81	54.167	Anas_platyrhynchos
ENSPKIG00000022837	-	69	53.448	ENSACAG00000028464	RALYL	80	52.941	Anolis_carolinensis
ENSPKIG00000022837	-	85	52.788	ENSANAG00000023383	RALYL	78	58.222	Aotus_nancymaae
ENSPKIG00000022837	-	86	82.182	ENSACLG00000000995	-	92	77.778	Astatotilapia_calliptera
ENSPKIG00000022837	-	84	82.528	ENSACLG00000005707	-	88	78.067	Astatotilapia_calliptera
ENSPKIG00000022837	-	86	81.091	ENSACLG00000013636	-	89	78.596	Astatotilapia_calliptera
ENSPKIG00000022837	-	83	76.894	ENSAMXG00000034915	zgc:55733	89	75.000	Astyanax_mexicanus
ENSPKIG00000022837	-	67	79.245	ENSAMXG00000042946	hnrnpc	97	81.675	Astyanax_mexicanus
ENSPKIG00000022837	-	85	52.416	ENSCJAG00000000402	RALYL	78	57.778	Callithrix_jacchus
ENSPKIG00000022837	-	85	50.890	ENSCPOG00000012314	RALYL	80	55.230	Cavia_porcellus
ENSPKIG00000022837	-	85	53.160	ENSCCAG00000025003	RALYL	76	79.487	Cebus_capucinus
ENSPKIG00000022837	-	85	52.788	ENSCATG00000042145	RALYL	78	58.222	Cercocebus_atys
ENSPKIG00000022837	-	85	50.534	ENSCLAG00000005228	RALYL	80	55.230	Chinchilla_lanigera
ENSPKIG00000022837	-	67	55.111	ENSCHOG00000013228	RALYL	75	52.586	Choloepus_hoffmanni
ENSPKIG00000022837	-	85	52.788	ENSCANG00000039144	RALYL	78	58.222	Colobus_angolensis_palliatus
ENSPKIG00000022837	-	69	55.172	ENSCGRG00001009241	Ralyl	79	55.274	Cricetulus_griseus_chok1gshd
ENSPKIG00000022837	-	76	82.988	ENSCSEG00000021349	-	74	80.932	Cynoglossus_semilaevis
ENSPKIG00000022837	-	70	73.661	ENSCSEG00000019769	-	73	75.342	Cynoglossus_semilaevis
ENSPKIG00000022837	-	96	76.489	ENSCVAG00000016981	-	72	82.773	Cyprinodon_variegatus
ENSPKIG00000022837	-	88	66.548	ENSCVAG00000002797	-	77	66.667	Cyprinodon_variegatus
ENSPKIG00000022837	-	89	80.496	ENSDARG00000103845	zgc:55733	86	84.348	Danio_rerio
ENSPKIG00000022837	-	76	81.557	ENSDARG00000053810	hnrnpc	81	75.000	Danio_rerio
ENSPKIG00000022837	-	85	51.064	ENSDORG00000003721	Ralyl	79	55.319	Dipodomys_ordii
ENSPKIG00000022837	-	51	56.647	ENSETEG00000014028	RALYL	82	60.248	Echinops_telfairi
ENSPKIG00000022837	-	93	41.776	ENSEBUG00000012363	hnrnpc	67	47.137	Eptatretus_burgeri
ENSPKIG00000022837	-	89	43.007	ENSEBUG00000006049	RALYL	74	48.131	Eptatretus_burgeri
ENSPKIG00000022837	-	70	55.274	ENSEEUG00000007202	RALYL	81	55.042	Erinaceus_europaeus
ENSPKIG00000022837	-	96	70.261	ENSELUG00000007714	-	91	79.044	Esox_lucius
ENSPKIG00000022837	-	92	79.798	ENSELUG00000004132	-	89	78.967	Esox_lucius
ENSPKIG00000022837	-	67	58.411	ENSFALG00000008647	RALYL	96	58.216	Ficedula_albicollis
ENSPKIG00000022837	-	73	80.162	ENSFHEG00000007278	-	74	77.642	Fundulus_heteroclitus
ENSPKIG00000022837	-	86	78.339	ENSFHEG00000003605	-	91	72.982	Fundulus_heteroclitus
ENSPKIG00000022837	-	70	57.080	ENSGALG00000036938	RALYL	79	54.167	Gallus_gallus
ENSPKIG00000022837	-	97	76.176	ENSGAFG00000020992	-	100	71.787	Gambusia_affinis
ENSPKIG00000022837	-	86	78.339	ENSGAFG00000020486	-	91	74.035	Gambusia_affinis
ENSPKIG00000022837	-	82	79.545	ENSGACG00000017772	-	88	81.034	Gasterosteus_aculeatus
ENSPKIG00000022837	-	71	75.111	ENSGACG00000018932	-	90	75.111	Gasterosteus_aculeatus
ENSPKIG00000022837	-	85	52.788	ENSGGOG00000000841	RALYL	78	58.222	Gorilla_gorilla
ENSPKIG00000022837	-	98	79.503	ENSHBUG00000010527	-	74	84.874	Haplochromis_burtoni
ENSPKIG00000022837	-	86	82.182	ENSHBUG00000018342	-	92	78.125	Haplochromis_burtoni
ENSPKIG00000022837	-	85	50.178	ENSHGLG00000004866	RALYL	78	55.556	Heterocephalus_glaber_female
ENSPKIG00000022837	-	85	50.178	ENSHGLG00100017480	RALYL	78	55.556	Heterocephalus_glaber_male
ENSPKIG00000022837	-	82	77.206	ENSHCOG00000012333	hnrnpc	91	71.831	Hippocampus_comes
ENSPKIG00000022837	-	83	79.545	ENSIPUG00000011271	hnrnpc	98	82.895	Ictalurus_punctatus
ENSPKIG00000022837	-	89	79.078	ENSIPUG00000008666	zgc:55733	94	83.945	Ictalurus_punctatus
ENSPKIG00000022837	-	85	50.709	ENSSTOG00000012583	RALYL	81	54.202	Ictidomys_tridecemlineatus
ENSPKIG00000022837	-	86	82.182	ENSKMAG00000011170	-	84	77.612	Kryptolebias_marmoratus
ENSPKIG00000022837	-	96	75.159	ENSKMAG00000018265	-	82	76.952	Kryptolebias_marmoratus
ENSPKIG00000022837	-	96	73.101	ENSLBEG00000024418	-	78	76.763	Labrus_bergylta
ENSPKIG00000022837	-	86	80.797	ENSLBEG00000006979	-	77	83.260	Labrus_bergylta
ENSPKIG00000022837	-	98	78.056	ENSLBEG00000006193	-	84	75.368	Labrus_bergylta
ENSPKIG00000022837	-	84	73.091	ENSLOCG00000002560	hnrnpc	92	69.286	Lepisosteus_oculatus
ENSPKIG00000022837	-	85	52.788	ENSMNEG00000033288	RALYL	78	58.222	Macaca_nemestrina
ENSPKIG00000022837	-	85	52.788	ENSMLEG00000038284	RALYL	78	58.222	Mandrillus_leucophaeus
ENSPKIG00000022837	-	98	79.128	ENSMAMG00000008033	-	89	79.771	Mastacembelus_armatus
ENSPKIG00000022837	-	81	85.603	ENSMAMG00000012236	-	90	79.649	Mastacembelus_armatus
ENSPKIG00000022837	-	86	81.818	ENSMZEG00005020460	-	92	77.778	Maylandia_zebra
ENSPKIG00000022837	-	98	75.776	ENSMZEG00005024249	-	84	76.838	Maylandia_zebra
ENSPKIG00000022837	-	69	55.172	ENSMAUG00000015149	Ralyl	79	55.274	Mesocricetus_auratus
ENSPKIG00000022837	-	85	52.593	ENSMICG00000005558	RALYL	79	79.487	Microcebus_murinus
ENSPKIG00000022837	-	69	55.172	ENSMOCG00000017371	Ralyl	80	54.583	Microtus_ochrogaster
ENSPKIG00000022837	-	84	80.451	ENSMMOG00000021465	-	89	80.460	Mola_mola
ENSPKIG00000022837	-	90	72.241	ENSMMOG00000019520	-	84	84.545	Mola_mola
ENSPKIG00000022837	-	82	74.131	ENSMALG00000007520	-	91	70.968	Monopterus_albus
ENSPKIG00000022837	-	85	78.309	ENSMALG00000014623	-	84	76.103	Monopterus_albus
ENSPKIG00000022837	-	69	54.741	ENSMUSG00000039717	Ralyl	92	78.205	Mus_musculus
ENSPKIG00000022837	-	85	51.773	ENSMPUG00000010724	RALYL	77	54.545	Mustela_putorius_furo
ENSPKIG00000022837	-	77	52.529	ENSNGAG00000013375	Ralyl	79	55.274	Nannospalax_galili
ENSPKIG00000022837	-	98	79.814	ENSNBRG00000015676	-	98	74.534	Neolamprologus_brichardi
ENSPKIG00000022837	-	88	81.362	ENSNBRG00000004912	-	94	81.385	Neolamprologus_brichardi
ENSPKIG00000022837	-	88	51.613	ENSNLEG00000002702	RALYL	77	56.596	Nomascus_leucogenys
ENSPKIG00000022837	-	57	51.813	ENSOPRG00000013650	-	98	51.295	Ochotona_princeps
ENSPKIG00000022837	-	70	54.008	ENSODEG00000001012	RALYL	79	55.508	Octodon_degus
ENSPKIG00000022837	-	86	82.143	ENSONIG00000007859	-	94	78.853	Oreochromis_niloticus
ENSPKIG00000022837	-	98	79.814	ENSONIG00000018350	-	74	84.874	Oreochromis_niloticus
ENSPKIG00000022837	-	81	72.973	ENSORLG00000009999	-	87	69.343	Oryzias_latipes
ENSPKIG00000022837	-	81	80.827	ENSORLG00000003144	-	81	76.087	Oryzias_latipes
ENSPKIG00000022837	-	81	72.587	ENSORLG00020018228	hnrnpc	87	68.978	Oryzias_latipes_hni
ENSPKIG00000022837	-	81	80.827	ENSORLG00015009460	-	81	76.087	Oryzias_latipes_hsok
ENSPKIG00000022837	-	81	72.973	ENSORLG00015019755	-	87	69.343	Oryzias_latipes_hsok
ENSPKIG00000022837	-	96	79.553	ENSOMEG00000022665	-	82	79.182	Oryzias_melastigma
ENSPKIG00000022837	-	81	73.359	ENSOMEG00000020488	-	87	68.841	Oryzias_melastigma
ENSPKIG00000022837	-	85	52.788	ENSPPAG00000038705	RALYL	78	58.222	Pan_paniscus
ENSPKIG00000022837	-	85	54.779	ENSPPRG00000018612	RALYL	78	57.778	Panthera_pardus
ENSPKIG00000022837	-	85	54.779	ENSPTIG00000020331	RALYL	79	57.018	Panthera_tigris_altaica
ENSPKIG00000022837	-	85	52.788	ENSPTRG00000020381	RALYL	78	58.222	Pan_troglodytes
ENSPKIG00000022837	-	85	52.788	ENSPANG00000029305	RALYL	78	58.222	Papio_anubis
ENSPKIG00000022837	-	70	53.586	ENSPSIG00000011135	RALYL	78	54.043	Pelodiscus_sinensis
ENSPKIG00000022837	-	95	62.791	ENSPMGG00000017774	-	96	65.948	Periophthalmus_magnuspinnatus
ENSPKIG00000022837	-	68	87.037	ENSPMGG00000013144	-	82	83.486	Periophthalmus_magnuspinnatus
ENSPKIG00000022837	-	69	55.172	ENSPEMG00000016447	Ralyl	79	55.274	Peromyscus_maniculatus_bairdii
ENSPKIG00000022837	-	67	53.304	ENSPMAG00000002407	RALYL	97	53.304	Petromyzon_marinus
ENSPKIG00000022837	-	86	77.617	ENSPFOG00000001583	-	91	73.427	Poecilia_formosa
ENSPKIG00000022837	-	96	77.460	ENSPFOG00000002643	-	99	72.308	Poecilia_formosa
ENSPKIG00000022837	-	86	77.174	ENSPLAG00000015305	-	91	72.982	Poecilia_latipinna
ENSPKIG00000022837	-	96	76.899	ENSPLAG00000000061	-	81	77.239	Poecilia_latipinna
ENSPKIG00000022837	-	86	79.422	ENSPMEG00000004802	-	92	73.356	Poecilia_mexicana
ENSPKIG00000022837	-	96	77.143	ENSPMEG00000016524	-	99	72.308	Poecilia_mexicana
ENSPKIG00000022837	-	88	75.801	ENSPREG00000001852	-	96	75.170	Poecilia_reticulata
ENSPKIG00000022837	-	86	75.725	ENSPREG00000007928	-	91	74.386	Poecilia_reticulata
ENSPKIG00000022837	-	89	48.814	ENSPVAG00000010821	RALYL	79	55.833	Pteropus_vampyrus
ENSPKIG00000022837	-	82	83.012	ENSPNYG00000020293	-	87	80.460	Pundamilia_nyererei
ENSPKIG00000022837	-	97	72.638	ENSPNYG00000003747	-	88	78.439	Pundamilia_nyererei
ENSPKIG00000022837	-	76	81.557	ENSPNAG00000015686	hnrnpc	87	78.652	Pygocentrus_nattereri
ENSPKIG00000022837	-	83	74.906	ENSPNAG00000019200	zgc:55733	77	82.479	Pygocentrus_nattereri
ENSPKIG00000022837	-	85	52.788	ENSRROG00000023925	RALYL	81	77.500	Rhinopithecus_roxellana
ENSPKIG00000022837	-	97	82.258	ENSSFOG00015012015	-	92	81.935	Scleropages_formosus
ENSPKIG00000022837	-	82	90.076	ENSSFOG00015012924	-	90	90.458	Scleropages_formosus
ENSPKIG00000022837	-	95	79.605	ENSSMAG00000013592	-	99	74.608	Scophthalmus_maximus
ENSPKIG00000022837	-	97	68.301	ENSSMAG00000011147	-	79	85.253	Scophthalmus_maximus
ENSPKIG00000022837	-	86	84.727	ENSSDUG00000001723	-	92	78.472	Seriola_dumerili
ENSPKIG00000022837	-	98	76.176	ENSSDUG00000006730	-	82	78.358	Seriola_dumerili
ENSPKIG00000022837	-	84	78.358	ENSSLDG00000007474	-	90	78.358	Seriola_lalandi_dorsalis
ENSPKIG00000022837	-	84	84.644	ENSSLDG00000007454	-	86	79.630	Seriola_lalandi_dorsalis
ENSPKIG00000022837	-	57	79.348	ENSSARG00000002374	RALYL	59	62.791	Sorex_araneus
ENSPKIG00000022837	-	98	73.668	ENSSPAG00000013996	-	82	78.277	Stegastes_partitus
ENSPKIG00000022837	-	85	84.559	ENSSPAG00000023204	-	92	78.819	Stegastes_partitus
ENSPKIG00000022837	-	69	54.741	ENSTGUG00000011689	RALYL	80	55.319	Taeniopygia_guttata
ENSPKIG00000022837	-	84	80.377	ENSTRUG00000020158	-	90	75.357	Takifugu_rubripes
ENSPKIG00000022837	-	82	79.087	ENSTNIG00000007427	-	84	77.947	Tetraodon_nigroviridis
ENSPKIG00000022837	-	80	72.157	ENSTNIG00000000334	-	84	77.155	Tetraodon_nigroviridis
ENSPKIG00000022837	-	69	49.573	ENSTBEG00000005551	RALYL	89	50.000	Tupaia_belangeri
ENSPKIG00000022837	-	70	52.500	ENSTTRG00000015762	RALYL	78	53.913	Tursiops_truncatus
ENSPKIG00000022837	-	85	50.000	ENSVPAG00000008501	RALYL	77	54.587	Vicugna_pacos
ENSPKIG00000022837	-	86	72.826	ENSXCOG00000006552	-	74	73.391	Xiphophorus_couchianus
ENSPKIG00000022837	-	86	79.061	ENSXMAG00000009333	-	91	74.035	Xiphophorus_maculatus
ENSPKIG00000022837	-	81	81.008	ENSXMAG00000022849	-	93	75.170	Xiphophorus_maculatus