EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000023018 (Gene tree)
Gene ID: 111856734
Gene Symbol: tsen54
Alias: -
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 8816 bases
Position: chrPGUA01000314.1:242580-251395
Accession: 111856734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000006940	tRNA_int_end_N2	PF12928.7	2.9e-19	1	1
ENSPKIP00000006924	tRNA_int_end_N2	PF12928.7	9.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000030977	-	2481	-	ENSPKIP00000006940	542 (aa)	XP_023692695	UPI000CD61BFA
ENSPKIT00000030961	-	3119	-	ENSPKIP00000006924	412 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000023018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000023018's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000023018	tsen54	100	45.116	ENSG00000182173	TSEN54	99	69.014	Homo_sapiens
ENSPKIG00000023018	tsen54	99	57.042	ENSAPOG00000009659	tsen54	99	56.808	Acanthochromis_polyacanthus
ENSPKIG00000023018	tsen54	100	44.719	ENSAMEG00000009414	TSEN54	97	46.320	Ailuropoda_melanoleuca
ENSPKIG00000023018	tsen54	99	56.573	ENSAOCG00000000152	tsen54	98	55.396	Amphiprion_ocellaris
ENSPKIG00000023018	tsen54	99	55.869	ENSAPEG00000018931	tsen54	97	54.856	Amphiprion_percula
ENSPKIG00000023018	tsen54	99	53.472	ENSATEG00000019860	tsen54	99	52.941	Anabas_testudineus
ENSPKIG00000023018	tsen54	100	46.682	ENSAPLG00000009419	TSEN54	100	44.828	Anas_platyrhynchos
ENSPKIG00000023018	tsen54	99	44.186	ENSACAG00000006714	TSEN54	97	45.772	Anolis_carolinensis
ENSPKIG00000023018	tsen54	100	45.266	ENSANAG00000024061	TSEN54	96	46.642	Aotus_nancymaae
ENSPKIG00000023018	tsen54	99	54.098	ENSACLG00000019800	tsen54	99	53.734	Astatotilapia_calliptera
ENSPKIG00000023018	tsen54	99	56.835	ENSAMXG00000006546	tsen54	96	56.098	Astyanax_mexicanus
ENSPKIG00000023018	tsen54	100	45.000	ENSBTAG00000000824	TSEN54	97	45.668	Bos_taurus
ENSPKIG00000023018	tsen54	100	44.700	ENSCJAG00000014278	TSEN54	96	45.652	Callithrix_jacchus
ENSPKIG00000023018	tsen54	100	44.072	ENSCAFG00000004798	TSEN54	97	45.989	Canis_familiaris
ENSPKIG00000023018	tsen54	100	44.072	ENSCAFG00020000312	TSEN54	97	45.989	Canis_lupus_dingo
ENSPKIG00000023018	tsen54	100	46.083	ENSCHIG00000019908	TSEN54	97	46.168	Capra_hircus
ENSPKIG00000023018	tsen54	100	43.379	ENSTSYG00000037439	TSEN54	100	42.308	Carlito_syrichta
ENSPKIG00000023018	tsen54	100	46.682	ENSCCAG00000036624	TSEN54	96	46.642	Cebus_capucinus
ENSPKIG00000023018	tsen54	100	46.544	ENSCATG00000042877	TSEN54	96	47.005	Cercocebus_atys
ENSPKIG00000023018	tsen54	100	47.564	ENSCLAG00000002924	TSEN54	97	47.145	Chinchilla_lanigera
ENSPKIG00000023018	tsen54	100	45.814	ENSCSAG00000004809	TSEN54	97	46.824	Chlorocebus_sabaeus
ENSPKIG00000023018	tsen54	99	47.477	ENSCPBG00000028071	TSEN54	97	45.803	Chrysemys_picta_bellii
ENSPKIG00000023018	tsen54	100	46.083	ENSCANG00000028053	TSEN54	97	46.642	Colobus_angolensis_palliatus
ENSPKIG00000023018	tsen54	100	45.662	ENSCGRG00001020029	Tsen54	97	45.471	Cricetulus_griseus_chok1gshd
ENSPKIG00000023018	tsen54	100	45.662	ENSCGRG00000016289	Tsen54	100	43.299	Cricetulus_griseus_crigri
ENSPKIG00000023018	tsen54	99	47.837	ENSCSEG00000020586	tsen54	99	47.837	Cynoglossus_semilaevis
ENSPKIG00000023018	tsen54	99	58.495	ENSDARG00000036844	tsen54	99	57.767	Danio_rerio
ENSPKIG00000023018	tsen54	82	57.360	ENSDNOG00000018452	TSEN54	97	45.259	Dasypus_novemcinctus
ENSPKIG00000023018	tsen54	100	44.598	ENSDORG00000004073	Tsen54	97	44.809	Dipodomys_ordii
ENSPKIG00000023018	tsen54	96	32.079	ENSEBUG00000005203	TSEN54	62	55.046	Eptatretus_burgeri
ENSPKIG00000023018	tsen54	100	46.606	ENSEASG00005000579	TSEN54	97	46.583	Equus_asinus_asinus
ENSPKIG00000023018	tsen54	100	46.606	ENSECAG00000004924	TSEN54	97	46.583	Equus_caballus
ENSPKIG00000023018	tsen54	100	43.080	ENSEEUG00000008467	TSEN54	100	42.944	Erinaceus_europaeus
ENSPKIG00000023018	tsen54	99	55.251	ENSELUG00000017703	tsen54	93	55.282	Esox_lucius
ENSPKIG00000023018	tsen54	100	44.719	ENSFCAG00000023712	TSEN54	97	45.438	Felis_catus
ENSPKIG00000023018	tsen54	100	44.368	ENSFALG00000001119	TSEN54	93	43.810	Ficedula_albicollis
ENSPKIG00000023018	tsen54	100	46.714	ENSFDAG00000019090	TSEN54	99	44.813	Fukomys_damarensis
ENSPKIG00000023018	tsen54	99	55.738	ENSFHEG00000005470	tsen54	99	55.556	Fundulus_heteroclitus
ENSPKIG00000023018	tsen54	78	60.396	ENSGMOG00000013146	tsen54	95	52.018	Gadus_morhua
ENSPKIG00000023018	tsen54	100	43.478	ENSGALG00000047163	TSEN54	96	43.152	Gallus_gallus
ENSPKIG00000023018	tsen54	99	54.831	ENSGAFG00000005111	tsen54	99	54.228	Gambusia_affinis
ENSPKIG00000023018	tsen54	99	50.943	ENSGACG00000014987	tsen54	99	51.963	Gasterosteus_aculeatus
ENSPKIG00000023018	tsen54	100	45.909	ENSGAGG00000006825	TSEN54	96	45.307	Gopherus_agassizii
ENSPKIG00000023018	tsen54	100	45.349	ENSGGOG00000009417	TSEN54	100	46.520	Gorilla_gorilla
ENSPKIG00000023018	tsen54	97	47.202	ENSHBUG00000018296	tsen54	99	46.959	Haplochromis_burtoni
ENSPKIG00000023018	tsen54	100	45.287	ENSHGLG00000007979	TSEN54	97	45.719	Heterocephalus_glaber_female
ENSPKIG00000023018	tsen54	100	45.287	ENSHGLG00100005497	TSEN54	97	44.809	Heterocephalus_glaber_male
ENSPKIG00000023018	tsen54	99	52.404	ENSHCOG00000007481	tsen54	99	52.644	Hippocampus_comes
ENSPKIG00000023018	tsen54	99	47.059	ENSIPUG00000000590	tsen54	97	48.339	Ictalurus_punctatus
ENSPKIG00000023018	tsen54	100	44.240	ENSSTOG00000012883	TSEN54	97	44.891	Ictidomys_tridecemlineatus
ENSPKIG00000023018	tsen54	100	46.259	ENSJJAG00000007365	Tsen54	97	46.931	Jaculus_jaculus
ENSPKIG00000023018	tsen54	99	53.917	ENSKMAG00000006944	tsen54	99	52.847	Kryptolebias_marmoratus
ENSPKIG00000023018	tsen54	99	52.482	ENSLBEG00000004199	tsen54	99	52.174	Labrus_bergylta
ENSPKIG00000023018	tsen54	100	38.952	ENSLACG00000009497	TSEN54	100	39.421	Latimeria_chalumnae
ENSPKIG00000023018	tsen54	100	56.849	ENSLOCG00000011191	tsen54	97	54.792	Lepisosteus_oculatus
ENSPKIG00000023018	tsen54	99	44.988	ENSLAFG00000011655	TSEN54	92	44.316	Loxodonta_africana
ENSPKIG00000023018	tsen54	100	45.814	ENSMFAG00000000712	TSEN54	97	47.005	Macaca_fascicularis
ENSPKIG00000023018	tsen54	100	45.814	ENSMNEG00000029199	TSEN54	97	47.005	Macaca_nemestrina
ENSPKIG00000023018	tsen54	100	45.814	ENSMLEG00000044168	TSEN54	88	45.030	Mandrillus_leucophaeus
ENSPKIG00000023018	tsen54	99	55.769	ENSMAMG00000019773	tsen54	98	55.805	Mastacembelus_armatus
ENSPKIG00000023018	tsen54	99	53.916	ENSMZEG00005000884	tsen54	99	53.552	Maylandia_zebra
ENSPKIG00000023018	tsen54	100	42.308	ENSMGAG00000009556	TSEN54	95	42.647	Meleagris_gallopavo
ENSPKIG00000023018	tsen54	100	45.662	ENSMAUG00000016838	Tsen54	97	45.471	Mesocricetus_auratus
ENSPKIG00000023018	tsen54	100	45.843	ENSMICG00000044012	TSEN54	97	47.339	Microcebus_murinus
ENSPKIG00000023018	tsen54	100	45.434	ENSMOCG00000021585	Tsen54	97	44.928	Microtus_ochrogaster
ENSPKIG00000023018	tsen54	99	47.733	ENSMMOG00000020189	tsen54	99	50.189	Mola_mola
ENSPKIG00000023018	tsen54	100	45.982	ENSMODG00000007438	TSEN54	95	45.552	Monodelphis_domestica
ENSPKIG00000023018	tsen54	99	54.348	ENSMALG00000020573	tsen54	99	54.348	Monopterus_albus
ENSPKIG00000023018	tsen54	100	45.558	MGP_CAROLIEiJ_G0017417	Tsen54	97	45.389	Mus_caroli
ENSPKIG00000023018	tsen54	100	46.241	ENSMUSG00000020781	Tsen54	97	45.931	Mus_musculus
ENSPKIG00000023018	tsen54	100	45.786	MGP_PahariEiJ_G0018547	Tsen54	97	45.750	Mus_pahari
ENSPKIG00000023018	tsen54	100	46.014	MGP_SPRETEiJ_G0018262	Tsen54	97	45.750	Mus_spretus
ENSPKIG00000023018	tsen54	100	44.944	ENSMPUG00000013870	TSEN54	97	46.071	Mustela_putorius_furo
ENSPKIG00000023018	tsen54	100	45.116	ENSMLUG00000015298	TSEN54	97	45.018	Myotis_lucifugus
ENSPKIG00000023018	tsen54	100	45.035	ENSNGAG00000015673	Tsen54	99	44.604	Nannospalax_galili
ENSPKIG00000023018	tsen54	100	42.759	ENSMEUG00000011908	TSEN54	100	41.980	Notamacropus_eugenii
ENSPKIG00000023018	tsen54	100	42.361	ENSOPRG00000012513	TSEN54	97	43.223	Ochotona_princeps
ENSPKIG00000023018	tsen54	99	53.636	ENSONIG00000009543	tsen54	99	53.455	Oreochromis_niloticus
ENSPKIG00000023018	tsen54	100	42.466	ENSOCUG00000009875	TSEN54	97	41.906	Oryctolagus_cuniculus
ENSPKIG00000023018	tsen54	99	51.807	ENSORLG00000000852	tsen54	98	52.328	Oryzias_latipes
ENSPKIG00000023018	tsen54	99	51.589	ENSORLG00020018221	tsen54	98	52.886	Oryzias_latipes_hni
ENSPKIG00000023018	tsen54	99	51.825	ENSORLG00015009413	tsen54	99	52.612	Oryzias_latipes_hsok
ENSPKIG00000023018	tsen54	99	54.015	ENSOMEG00000014402	tsen54	97	53.974	Oryzias_melastigma
ENSPKIG00000023018	tsen54	100	42.424	ENSOGAG00000001442	TSEN54	97	44.015	Otolemur_garnettii
ENSPKIG00000023018	tsen54	100	45.642	ENSOARG00000010361	TSEN54	100	44.399	Ovis_aries
ENSPKIG00000023018	tsen54	100	45.688	ENSPPAG00000043519	TSEN54	100	45.421	Pan_paniscus
ENSPKIG00000023018	tsen54	100	44.944	ENSPPRG00000009162	TSEN54	97	45.796	Panthera_pardus
ENSPKIG00000023018	tsen54	100	44.419	ENSPTIG00000019312	TSEN54	96	43.838	Panthera_tigris_altaica
ENSPKIG00000023018	tsen54	100	45.349	ENSPTRG00000009646	TSEN54	97	46.533	Pan_troglodytes
ENSPKIG00000023018	tsen54	100	46.047	ENSPANG00000020133	TSEN54	97	47.187	Papio_anubis
ENSPKIG00000023018	tsen54	99	46.759	ENSPSIG00000012807	TSEN54	99	45.116	Pelodiscus_sinensis
ENSPKIG00000023018	tsen54	99	40.191	ENSPMGG00000019578	tsen54	84	69.106	Periophthalmus_magnuspinnatus
ENSPKIG00000023018	tsen54	100	44.240	ENSPEMG00000014857	Tsen54	97	44.343	Peromyscus_maniculatus_bairdii
ENSPKIG00000023018	tsen54	99	54.739	ENSPFOG00000022740	tsen54	98	54.713	Poecilia_formosa
ENSPKIG00000023018	tsen54	99	55.024	ENSPLAG00000014847	tsen54	98	54.935	Poecilia_latipinna
ENSPKIG00000023018	tsen54	99	54.785	ENSPMEG00000022876	tsen54	98	54.749	Poecilia_mexicana
ENSPKIG00000023018	tsen54	99	54.762	ENSPREG00000013090	tsen54	99	54.182	Poecilia_reticulata
ENSPKIG00000023018	tsen54	100	45.107	ENSPPYG00000008629	TSEN54	100	44.533	Pongo_abelii
ENSPKIG00000023018	tsen54	94	38.366	ENSPCAG00000002093	TSEN54	96	39.652	Procavia_capensis
ENSPKIG00000023018	tsen54	100	44.318	ENSPCOG00000027880	TSEN54	97	45.946	Propithecus_coquereli
ENSPKIG00000023018	tsen54	100	45.578	ENSPVAG00000008446	TSEN54	97	45.766	Pteropus_vampyrus
ENSPKIG00000023018	tsen54	99	52.817	ENSPNYG00000010217	tsen54	99	52.207	Pundamilia_nyererei
ENSPKIG00000023018	tsen54	99	57.007	ENSPNAG00000003770	tsen54	99	54.265	Pygocentrus_nattereri
ENSPKIG00000023018	tsen54	100	45.805	ENSRNOG00000004598	Tsen54	97	45.405	Rattus_norvegicus
ENSPKIG00000023018	tsen54	100	46.313	ENSRBIG00000043040	TSEN54	97	46.824	Rhinopithecus_bieti
ENSPKIG00000023018	tsen54	100	46.313	ENSRROG00000030797	TSEN54	97	46.824	Rhinopithecus_roxellana
ENSPKIG00000023018	tsen54	100	42.032	ENSSBOG00000013543	TSEN54	72	65.714	Saimiri_boliviensis_boliviensis
ENSPKIG00000023018	tsen54	100	44.419	ENSSHAG00000018127	TSEN54	96	44.485	Sarcophilus_harrisii
ENSPKIG00000023018	tsen54	100	68.409	ENSSFOG00015004093	tsen54	100	66.983	Scleropages_formosus
ENSPKIG00000023018	tsen54	99	52.927	ENSSMAG00000012449	tsen54	98	53.690	Scophthalmus_maximus
ENSPKIG00000023018	tsen54	99	54.394	ENSSDUG00000021506	tsen54	99	53.818	Seriola_dumerili
ENSPKIG00000023018	tsen54	99	54.394	ENSSLDG00000016303	tsen54	99	53.636	Seriola_lalandi_dorsalis
ENSPKIG00000023018	tsen54	80	40.611	ENSSPUG00000008988	TSEN54	96	39.520	Sphenodon_punctatus
ENSPKIG00000023018	tsen54	99	56.086	ENSSPAG00000008098	-	99	54.688	Stegastes_partitus
ENSPKIG00000023018	tsen54	99	52.392	ENSSPAG00000008047	tsen54	99	52.392	Stegastes_partitus
ENSPKIG00000023018	tsen54	100	46.591	ENSSSCG00000036852	TSEN54	97	46.570	Sus_scrofa
ENSPKIG00000023018	tsen54	100	45.221	ENSTGUG00000008548	TSEN54	100	42.268	Taeniopygia_guttata
ENSPKIG00000023018	tsen54	99	53.477	ENSTRUG00000004230	tsen54	99	52.102	Takifugu_rubripes
ENSPKIG00000023018	tsen54	99	50.358	ENSTNIG00000011281	tsen54	97	53.497	Tetraodon_nigroviridis
ENSPKIG00000023018	tsen54	100	45.495	ENSTTRG00000015828	TSEN54	100	43.936	Tursiops_truncatus
ENSPKIG00000023018	tsen54	100	45.291	ENSUAMG00000010045	TSEN54	100	45.067	Ursus_americanus
ENSPKIG00000023018	tsen54	100	43.820	ENSUMAG00000008979	TSEN54	100	44.944	Ursus_maritimus
ENSPKIG00000023018	tsen54	100	44.966	ENSVVUG00000011411	TSEN54	97	46.223	Vulpes_vulpes
ENSPKIG00000023018	tsen54	99	44.028	ENSXETG00000012532	tsen54	99	44.776	Xenopus_tropicalis
ENSPKIG00000023018	tsen54	99	51.914	ENSXCOG00000018245	tsen54	99	51.675	Xiphophorus_couchianus
ENSPKIG00000023018	tsen54	99	53.957	ENSXMAG00000018818	tsen54	99	53.846	Xiphophorus_maculatus