EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000023115 (Gene tree)
Gene ID: 111839212
Gene Symbol: setd1ba
Alias: -
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 31230 bases
Position: chrPGUA01000008.1:5440454-5471683
Accession: 111839212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000007087	RRM_1	PF00076.22	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000031131	-	5862	XM_023802899	ENSPKIP00000007087	1909 (aa)	XP_023658667	UPI000CD5FBBE

Gene Model

Click here to download ENSPKIG00000023115's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000023115's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000023115	setd1ba	52	59.823	ENSACIG00000016453	setd1ba	52	58.299	Amphilophus_citrinellus
ENSPKIG00000023115	setd1ba	89	59.494	ENSATEG00000021563	setd1ba	77	80.609	Anabas_testudineus
ENSPKIG00000023115	setd1ba	58	52.981	ENSCAFG00020016619	SETD1B	60	54.003	Canis_lupus_dingo
ENSPKIG00000023115	setd1ba	57	68.525	ENSCHIG00000025896	SETD1A	52	68.301	Capra_hircus
ENSPKIG00000023115	setd1ba	66	57.143	ENSCHIG00000013406	SETD1B	66	58.425	Capra_hircus
ENSPKIG00000023115	setd1ba	76	65.891	ENSCLAG00000013200	SETD1B	58	54.079	Chinchilla_lanigera
ENSPKIG00000023115	setd1ba	52	68.852	ENSCGRG00000016965	-	52	68.627	Cricetulus_griseus_crigri
ENSPKIG00000023115	setd1ba	89	58.509	ENSCVAG00000022068	setd1ba	87	57.806	Cyprinodon_variegatus
ENSPKIG00000023115	setd1ba	63	50.847	ENSECAG00000006549	SETD1B	64	51.835	Equus_caballus
ENSPKIG00000023115	setd1ba	85	60.957	ENSGAFG00000008712	setd1ba	83	61.477	Gambusia_affinis
ENSPKIG00000023115	setd1ba	76	63.483	ENSGACG00000017002	setd1ba	89	63.483	Gasterosteus_aculeatus
ENSPKIG00000023115	setd1ba	63	68.301	ENSGGOG00000016052	SETD1A	54	68.301	Gorilla_gorilla
ENSPKIG00000023115	setd1ba	89	58.871	ENSKMAG00000007804	setd1ba	85	59.501	Kryptolebias_marmoratus
ENSPKIG00000023115	setd1ba	70	78.670	ENSLBEG00000020113	setd1ba	72	77.562	Labrus_bergylta
ENSPKIG00000023115	setd1ba	66	82.911	ENSLAFG00000026518	SETD1B	72	84.667	Loxodonta_africana
ENSPKIG00000023115	setd1ba	57	61.311	ENSLAFG00000023335	SETD1A	53	61.111	Loxodonta_africana
ENSPKIG00000023115	setd1ba	63	68.301	ENSMLEG00000030176	SETD1A	54	68.301	Mandrillus_leucophaeus
ENSPKIG00000023115	setd1ba	50	61.824	ENSMMOG00000008190	setd1ba	51	59.857	Mola_mola
ENSPKIG00000023115	setd1ba	78	59.395	ENSODEG00000010155	SETD1B	65	58.796	Octodon_degus
ENSPKIG00000023115	setd1ba	78	60.709	ENSOCUG00000017708	SETD1B	67	60.794	Oryctolagus_cuniculus
ENSPKIG00000023115	setd1ba	88	60.144	ENSORLG00000008435	setd1ba	88	57.986	Oryzias_latipes
ENSPKIG00000023115	setd1ba	88	60.144	ENSORLG00020017079	setd1ba	88	57.986	Oryzias_latipes_hni
ENSPKIG00000023115	setd1ba	64	60.940	ENSPSIG00000015966	-	67	59.019	Pelodiscus_sinensis
ENSPKIG00000023115	setd1ba	84	60.102	ENSPMGG00000011527	setd1ba	87	60.325	Periophthalmus_magnuspinnatus
ENSPKIG00000023115	setd1ba	57	68.852	ENSPEMG00000024243	-	74	54.348	Peromyscus_maniculatus_bairdii
ENSPKIG00000023115	setd1ba	52	58.558	ENSPFOG00000019768	setd1ba	51	58.350	Poecilia_formosa
ENSPKIG00000023115	setd1ba	90	60.447	ENSPNYG00000009484	setd1ba	83	63.967	Pundamilia_nyererei
ENSPKIG00000023115	setd1ba	52	64.008	ENSPNAG00000016011	setd1ba	53	63.507	Pygocentrus_nattereri
ENSPKIG00000023115	setd1ba	57	69.637	ENSRNOG00000055028	Setd1a	52	69.408	Rattus_norvegicus
ENSPKIG00000023115	setd1ba	70	59.583	ENSSFOG00015015331	setd1ba	72	60.210	Scleropages_formosus
ENSPKIG00000023115	setd1ba	84	65.681	ENSSDUG00000018313	setd1ba	85	63.285	Seriola_dumerili
ENSPKIG00000023115	setd1ba	51	74.194	ENSSSCG00000009806	SETD1B	55	86.242	Sus_scrofa
ENSPKIG00000023115	setd1ba	85	60.657	ENSTRUG00000009533	setd1ba	85	61.031	Takifugu_rubripes