EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000023171 (Gene tree)
Gene ID: 111841198
Gene Symbol: hbs1l
Alias: -
Full Name: HBS1 like translational GTPase
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 30257 bases
Position: chrPGUA01000083.1:2152499-2182755
Accession: 111841198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000007216	GTP_EFTU	PF00009.27	5.8e-47	1	1
ENSPKIP00000007186	GTP_EFTU	PF00009.27	7.2e-47	1	1
ENSPKIP00000007159	GTP_EFTU	PF00009.27	7.3e-47	1	1
ENSPKIP00000007216	GTP_EFTU_D2	PF03144.25	8e-09	1	1
ENSPKIP00000007186	GTP_EFTU_D2	PF03144.25	9.1e-09	1	1
ENSPKIP00000007159	GTP_EFTU_D2	PF03144.25	9.4e-09	1	1
ENSPKIP00000007186	GTP_EFTU_D3	PF03143.17	5.6e-28	1	1
ENSPKIP00000007216	GTP_EFTU_D3	PF03143.17	6.4e-28	1	1
ENSPKIP00000007159	GTP_EFTU_D3	PF03143.17	8.2e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000031204	-	2067	-	ENSPKIP00000007159	688 (aa)	-	-
ENSPKIT00000031231	-	2247	-	ENSPKIP00000007186	684 (aa)	XP_023662549	UPI000CD62DF0
ENSPKIT00000031262	-	1857	-	ENSPKIP00000007216	618 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000023171's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000023171's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000023171	hbs1l	68	38.710	ENSPKIG00000017246	si:dkey-37o8.1	95	38.710
ENSPKIG00000023171	hbs1l	69	40.455	ENSPKIG00000002973	eef1a1b	95	40.455
ENSPKIG00000023171	hbs1l	69	39.817	ENSPKIG00000021856	eef1a2	94	39.817
ENSPKIG00000023171	hbs1l	69	40.227	ENSPKIG00000022865	-	95	40.227
ENSPKIG00000023171	hbs1l	68	38.588	ENSPKIG00000022644	gspt1	74	38.551

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000023171	hbs1l	100	71.739	ENSG00000112339	HBS1L	100	77.692	Homo_sapiens
ENSPKIG00000023171	hbs1l	81	86.436	ENSAPOG00000013169	hbs1l	92	86.436	Acanthochromis_polyacanthus
ENSPKIG00000023171	hbs1l	99	72.198	ENSAMEG00000009749	HBS1L	99	71.325	Ailuropoda_melanoleuca
ENSPKIG00000023171	hbs1l	83	82.852	ENSACIG00000017087	hbs1l	91	81.648	Amphilophus_citrinellus
ENSPKIG00000023171	hbs1l	100	75.143	ENSAPEG00000008320	hbs1l	99	80.871	Amphiprion_percula
ENSPKIG00000023171	hbs1l	97	81.086	ENSATEG00000004459	hbs1l	100	76.487	Anabas_testudineus
ENSPKIG00000023171	hbs1l	98	72.018	ENSAPLG00000007791	HBS1L	100	72.018	Anas_platyrhynchos
ENSPKIG00000023171	hbs1l	100	72.310	ENSACAG00000010120	HBS1L	100	72.023	Anolis_carolinensis
ENSPKIG00000023171	hbs1l	100	71.676	ENSANAG00000038076	HBS1L	99	74.516	Aotus_nancymaae
ENSPKIG00000023171	hbs1l	98	81.836	ENSACLG00000010469	hbs1l	98	82.274	Astatotilapia_calliptera
ENSPKIG00000023171	hbs1l	98	82.476	ENSAMXG00000004260	hbs1l	100	78.696	Astyanax_mexicanus
ENSPKIG00000023171	hbs1l	97	77.799	ENSBTAG00000020174	HBS1L	100	71.346	Bos_taurus
ENSPKIG00000023171	hbs1l	74	46.723	WBGene00010622	K07A12.4	99	40.615	Caenorhabditis_elegans
ENSPKIG00000023171	hbs1l	100	71.594	ENSCJAG00000007678	HBS1L	99	75.919	Callithrix_jacchus
ENSPKIG00000023171	hbs1l	100	72.134	ENSCAFG00000000226	HBS1L	100	71.263	Canis_familiaris
ENSPKIG00000023171	hbs1l	100	72.134	ENSCAFG00020021904	HBS1L	100	71.263	Canis_lupus_dingo
ENSPKIG00000023171	hbs1l	97	77.230	ENSCHIG00000010299	HBS1L	85	86.667	Capra_hircus
ENSPKIG00000023171	hbs1l	97	76.015	ENSTSYG00000007089	HBS1L	100	76.838	Carlito_syrichta
ENSPKIG00000023171	hbs1l	97	68.173	ENSCPOG00000007015	HBS1L	99	61.898	Cavia_porcellus
ENSPKIG00000023171	hbs1l	97	73.387	ENSCCAG00000033863	HBS1L	92	84.375	Cebus_capucinus
ENSPKIG00000023171	hbs1l	100	71.739	ENSCATG00000043042	HBS1L	97	75.926	Cercocebus_atys
ENSPKIG00000023171	hbs1l	97	76.705	ENSCLAG00000004937	HBS1L	100	71.056	Chinchilla_lanigera
ENSPKIG00000023171	hbs1l	100	71.346	ENSCSAG00000016791	HBS1L	100	71.346	Chlorocebus_sabaeus
ENSPKIG00000023171	hbs1l	94	83.871	ENSCHOG00000001852	HBS1L	85	83.871	Choloepus_hoffmanni
ENSPKIG00000023171	hbs1l	97	77.154	ENSCPBG00000017635	HBS1L	100	72.793	Chrysemys_picta_bellii
ENSPKIG00000023171	hbs1l	99	48.599	ENSCING00000005592	-	99	48.815	Ciona_intestinalis
ENSPKIG00000023171	hbs1l	93	58.568	ENSCSAVG00000002297	-	99	60.000	Ciona_savignyi
ENSPKIG00000023171	hbs1l	100	71.159	ENSCANG00000031208	HBS1L	97	75.556	Colobus_angolensis_palliatus
ENSPKIG00000023171	hbs1l	97	78.131	ENSCGRG00001024531	Hbs1l	100	71.821	Cricetulus_griseus_chok1gshd
ENSPKIG00000023171	hbs1l	97	78.131	ENSCGRG00000017361	Hbs1l	100	71.821	Cricetulus_griseus_crigri
ENSPKIG00000023171	hbs1l	97	80.074	ENSCSEG00000002794	hbs1l	94	75.852	Cynoglossus_semilaevis
ENSPKIG00000023171	hbs1l	97	79.735	ENSCVAG00000001462	hbs1l	95	79.735	Cyprinodon_variegatus
ENSPKIG00000023171	hbs1l	100	77.616	ENSDARG00000036778	hbs1l	100	77.471	Danio_rerio
ENSPKIG00000023171	hbs1l	97	77.883	ENSDORG00000005958	Hbs1l	100	71.512	Dipodomys_ordii
ENSPKIG00000023171	hbs1l	99	47.316	FBgn0042712	HBS1	99	50.980	Drosophila_melanogaster
ENSPKIG00000023171	hbs1l	97	71.589	ENSETEG00000000913	HBS1L	100	67.197	Echinops_telfairi
ENSPKIG00000023171	hbs1l	97	64.753	ENSEBUG00000010759	hbs1l	100	64.753	Eptatretus_burgeri
ENSPKIG00000023171	hbs1l	100	71.056	ENSEASG00005011148	HBS1L	100	70.478	Equus_asinus_asinus
ENSPKIG00000023171	hbs1l	100	71.491	ENSECAG00000004470	HBS1L	100	70.912	Equus_caballus
ENSPKIG00000023171	hbs1l	100	68.064	ENSEEUG00000013582	HBS1L	100	67.438	Erinaceus_europaeus
ENSPKIG00000023171	hbs1l	88	74.101	ENSELUG00000006444	hbs1l	96	75.904	Esox_lucius
ENSPKIG00000023171	hbs1l	100	72.754	ENSFCAG00000001810	HBS1L	100	79.271	Felis_catus
ENSPKIG00000023171	hbs1l	87	73.623	ENSFALG00000011898	HBS1L	100	73.623	Ficedula_albicollis
ENSPKIG00000023171	hbs1l	97	78.137	ENSFDAG00000011841	HBS1L	100	71.780	Fukomys_damarensis
ENSPKIG00000023171	hbs1l	97	79.735	ENSFHEG00000006942	hbs1l	99	79.735	Fundulus_heteroclitus
ENSPKIG00000023171	hbs1l	97	76.770	ENSGMOG00000011843	hbs1l	100	74.344	Gadus_morhua
ENSPKIG00000023171	hbs1l	100	72.464	ENSGALG00000013962	HBS1L	99	76.648	Gallus_gallus
ENSPKIG00000023171	hbs1l	100	73.257	ENSGAFG00000004157	hbs1l	98	79.962	Gambusia_affinis
ENSPKIG00000023171	hbs1l	97	80.907	ENSGACG00000011035	hbs1l	100	80.907	Gasterosteus_aculeatus
ENSPKIG00000023171	hbs1l	100	72.254	ENSGAGG00000002033	HBS1L	100	72.110	Gopherus_agassizii
ENSPKIG00000023171	hbs1l	85	71.296	ENSGGOG00000034956	-	93	80.645	Gorilla_gorilla
ENSPKIG00000023171	hbs1l	98	82.027	ENSHBUG00000013424	hbs1l	98	82.466	Haplochromis_burtoni
ENSPKIG00000023171	hbs1l	97	77.401	ENSHGLG00000000516	HBS1L	100	71.739	Heterocephalus_glaber_female
ENSPKIG00000023171	hbs1l	97	77.401	ENSHGLG00100003550	HBS1L	100	71.739	Heterocephalus_glaber_male
ENSPKIG00000023171	hbs1l	97	78.759	ENSHCOG00000007581	hbs1l	93	74.499	Hippocampus_comes
ENSPKIG00000023171	hbs1l	97	81.888	ENSIPUG00000010748	hbs1l	100	77.664	Ictalurus_punctatus
ENSPKIG00000023171	hbs1l	97	77.383	ENSSTOG00000007551	HBS1L	100	72.464	Ictidomys_tridecemlineatus
ENSPKIG00000023171	hbs1l	96	62.664	ENSJJAG00000012660	-	100	57.246	Jaculus_jaculus
ENSPKIG00000023171	hbs1l	99	69.477	ENSJJAG00000017024	-	97	69.041	Jaculus_jaculus
ENSPKIG00000023171	hbs1l	100	74.395	ENSKMAG00000012130	hbs1l	98	80.608	Kryptolebias_marmoratus
ENSPKIG00000023171	hbs1l	97	79.735	ENSLBEG00000002784	hbs1l	100	79.182	Labrus_bergylta
ENSPKIG00000023171	hbs1l	75	79.710	ENSLACG00000004528	HBS1L	99	79.388	Latimeria_chalumnae
ENSPKIG00000023171	hbs1l	97	82.959	ENSLOCG00000016221	hbs1l	100	78.622	Lepisosteus_oculatus
ENSPKIG00000023171	hbs1l	100	69.986	ENSLAFG00000007835	HBS1L	100	69.986	Loxodonta_africana
ENSPKIG00000023171	hbs1l	100	71.739	ENSMFAG00000003766	HBS1L	100	76.059	Macaca_fascicularis
ENSPKIG00000023171	hbs1l	97	74.318	ENSMMUG00000004802	HBS1L	100	75.875	Macaca_mulatta
ENSPKIG00000023171	hbs1l	100	71.739	ENSMNEG00000043942	HBS1L	100	76.059	Macaca_nemestrina
ENSPKIG00000023171	hbs1l	97	74.557	ENSMLEG00000043218	HBS1L	97	75.741	Mandrillus_leucophaeus
ENSPKIG00000023171	hbs1l	97	80.410	ENSMAMG00000016498	hbs1l	98	81.096	Mastacembelus_armatus
ENSPKIG00000023171	hbs1l	83	82.081	ENSMZEG00005024018	-	90	80.784	Maylandia_zebra
ENSPKIG00000023171	hbs1l	97	82.274	ENSMZEG00005015575	hbs1l	98	82.274	Maylandia_zebra
ENSPKIG00000023171	hbs1l	99	70.511	ENSMGAG00000013065	HBS1L	99	76.083	Meleagris_gallopavo
ENSPKIG00000023171	hbs1l	97	78.195	ENSMAUG00000001077	Hbs1l	100	71.304	Mesocricetus_auratus
ENSPKIG00000023171	hbs1l	97	66.171	ENSMICG00000030043	-	96	79.032	Microcebus_murinus
ENSPKIG00000023171	hbs1l	97	69.775	ENSMICG00000001533	-	99	69.775	Microcebus_murinus
ENSPKIG00000023171	hbs1l	100	72.504	ENSMOCG00000023038	Hbs1l	100	71.780	Microtus_ochrogaster
ENSPKIG00000023171	hbs1l	94	80.907	ENSMMOG00000015507	hbs1l	99	75.982	Mola_mola
ENSPKIG00000023171	hbs1l	100	73.043	ENSMODG00000017499	HBS1L	100	73.043	Monodelphis_domestica
ENSPKIG00000023171	hbs1l	97	80.863	ENSMALG00000010768	hbs1l	99	80.407	Monopterus_albus
ENSPKIG00000023171	hbs1l	97	77.154	MGP_CAROLIEiJ_G0015162	Hbs1l	100	71.387	Mus_caroli
ENSPKIG00000023171	hbs1l	97	77.154	ENSMUSG00000019977	Hbs1l	100	83.969	Mus_musculus
ENSPKIG00000023171	hbs1l	100	71.965	MGP_PahariEiJ_G0023782	Hbs1l	100	71.201	Mus_pahari
ENSPKIG00000023171	hbs1l	100	72.150	MGP_SPRETEiJ_G0015970	Hbs1l	100	71.387	Mus_spretus
ENSPKIG00000023171	hbs1l	100	71.884	ENSMPUG00000014810	HBS1L	100	71.159	Mustela_putorius_furo
ENSPKIG00000023171	hbs1l	100	71.739	ENSMLUG00000010618	HBS1L	100	71.014	Myotis_lucifugus
ENSPKIG00000023171	hbs1l	98	76.306	ENSNGAG00000015184	Hbs1l	100	72.174	Nannospalax_galili
ENSPKIG00000023171	hbs1l	100	80.741	ENSNBRG00000020095	hbs1l	98	82.466	Neolamprologus_brichardi
ENSPKIG00000023171	hbs1l	100	71.594	ENSNLEG00000014721	HBS1L	99	75.556	Nomascus_leucogenys
ENSPKIG00000023171	hbs1l	82	78.680	ENSMEUG00000003907	HBS1L	81	78.680	Notamacropus_eugenii
ENSPKIG00000023171	hbs1l	82	80.000	ENSOPRG00000013595	HBS1L	75	81.818	Ochotona_princeps
ENSPKIG00000023171	hbs1l	96	78.244	ENSODEG00000008959	HBS1L	100	71.492	Octodon_degus
ENSPKIG00000023171	hbs1l	97	82.081	ENSONIG00000000460	hbs1l	98	81.923	Oreochromis_niloticus
ENSPKIG00000023171	hbs1l	97	78.817	ENSOANG00000002684	-	99	71.346	Ornithorhynchus_anatinus
ENSPKIG00000023171	hbs1l	97	73.258	ENSOCUG00000011619	HBS1L	99	69.408	Oryctolagus_cuniculus
ENSPKIG00000023171	hbs1l	97	79.174	ENSORLG00000016559	hbs1l	97	79.174	Oryzias_latipes
ENSPKIG00000023171	hbs1l	97	79.174	ENSORLG00020003827	hbs1l	97	79.174	Oryzias_latipes_hni
ENSPKIG00000023171	hbs1l	97	78.987	ENSORLG00015023105	hbs1l	97	78.987	Oryzias_latipes_hsok
ENSPKIG00000023171	hbs1l	97	81.179	ENSOMEG00000016715	hbs1l	97	81.179	Oryzias_melastigma
ENSPKIG00000023171	hbs1l	100	71.408	ENSOGAG00000012604	HBS1L	100	71.159	Otolemur_garnettii
ENSPKIG00000023171	hbs1l	96	77.376	ENSOARG00000014798	-	99	70.972	Ovis_aries
ENSPKIG00000023171	hbs1l	97	77.040	ENSOARG00000005671	-	100	70.622	Ovis_aries
ENSPKIG00000023171	hbs1l	100	71.884	ENSPPAG00000029900	HBS1L	97	75.926	Pan_paniscus
ENSPKIG00000023171	hbs1l	100	72.754	ENSPPRG00000005285	HBS1L	100	77.390	Panthera_pardus
ENSPKIG00000023171	hbs1l	100	72.754	ENSPTIG00000015803	HBS1L	100	77.390	Panthera_tigris_altaica
ENSPKIG00000023171	hbs1l	100	71.884	ENSPTRG00000018630	HBS1L	97	75.926	Pan_troglodytes
ENSPKIG00000023171	hbs1l	100	71.739	ENSPANG00000007075	HBS1L	97	75.926	Papio_anubis
ENSPKIG00000023171	hbs1l	82	75.221	ENSPSIG00000016467	HBS1L	97	69.580	Pelodiscus_sinensis
ENSPKIG00000023171	hbs1l	99	74.194	ENSPMGG00000018051	hbs1l	96	86.702	Periophthalmus_magnuspinnatus
ENSPKIG00000023171	hbs1l	97	77.052	ENSPEMG00000014369	Hbs1l	100	70.954	Peromyscus_maniculatus_bairdii
ENSPKIG00000023171	hbs1l	97	71.053	ENSPMAG00000002516	hbs1l	100	64.723	Petromyzon_marinus
ENSPKIG00000023171	hbs1l	97	76.165	ENSPFOG00000021764	hbs1l	99	79.356	Poecilia_formosa
ENSPKIG00000023171	hbs1l	97	75.986	ENSPLAG00000006193	hbs1l	99	79.167	Poecilia_latipinna
ENSPKIG00000023171	hbs1l	100	73.257	ENSPMEG00000000925	hbs1l	99	79.545	Poecilia_mexicana
ENSPKIG00000023171	hbs1l	97	76.782	ENSPREG00000011270	hbs1l	95	78.788	Poecilia_reticulata
ENSPKIG00000023171	hbs1l	100	71.014	ENSPPYG00000017027	HBS1L	100	71.014	Pongo_abelii
ENSPKIG00000023171	hbs1l	96	76.493	ENSPCAG00000007002	HBS1L	78	77.281	Procavia_capensis
ENSPKIG00000023171	hbs1l	93	75.142	ENSPVAG00000015229	HBS1L	84	75.000	Pteropus_vampyrus
ENSPKIG00000023171	hbs1l	97	82.081	ENSPNYG00000013360	hbs1l	98	82.081	Pundamilia_nyererei
ENSPKIG00000023171	hbs1l	98	81.369	ENSPNAG00000026721	hbs1l	100	77.794	Pygocentrus_nattereri
ENSPKIG00000023171	hbs1l	97	77.528	ENSRNOG00000014531	Hbs1l	100	71.491	Rattus_norvegicus
ENSPKIG00000023171	hbs1l	100	71.594	ENSRBIG00000004484	HBS1L	100	71.594	Rhinopithecus_bieti
ENSPKIG00000023171	hbs1l	100	71.449	ENSRROG00000026176	HBS1L	97	75.926	Rhinopithecus_roxellana
ENSPKIG00000023171	hbs1l	74	36.383	YKR084C	-	78	36.439	Saccharomyces_cerevisiae
ENSPKIG00000023171	hbs1l	100	64.203	ENSSBOG00000016930	-	98	76.596	Saimiri_boliviensis_boliviensis
ENSPKIG00000023171	hbs1l	100	71.532	ENSSBOG00000019696	-	92	84.375	Saimiri_boliviensis_boliviensis
ENSPKIG00000023171	hbs1l	100	72.254	ENSSHAG00000013509	HBS1L	100	72.254	Sarcophilus_harrisii
ENSPKIG00000023171	hbs1l	99	84.480	ENSSFOG00015017544	hbs1l	96	84.480	Scleropages_formosus
ENSPKIG00000023171	hbs1l	97	81.538	ENSSMAG00000010621	hbs1l	100	73.684	Scophthalmus_maximus
ENSPKIG00000023171	hbs1l	100	75.533	ENSSDUG00000012974	hbs1l	98	81.061	Seriola_dumerili
ENSPKIG00000023171	hbs1l	97	78.744	ENSSLDG00000004960	hbs1l	99	80.591	Seriola_lalandi_dorsalis
ENSPKIG00000023171	hbs1l	98	71.704	ENSSARG00000006747	HBS1L	100	71.068	Sorex_araneus
ENSPKIG00000023171	hbs1l	97	76.460	ENSSPUG00000012389	HBS1L	99	70.972	Sphenodon_punctatus
ENSPKIG00000023171	hbs1l	97	72.239	ENSSSCG00000004169	HBS1L	100	70.625	Sus_scrofa
ENSPKIG00000023171	hbs1l	97	77.213	ENSTGUG00000011507	HBS1L	99	71.614	Taeniopygia_guttata
ENSPKIG00000023171	hbs1l	97	79.374	ENSTRUG00000016128	hbs1l	89	89.189	Takifugu_rubripes
ENSPKIG00000023171	hbs1l	97	80.566	ENSTNIG00000016320	hbs1l	99	74.927	Tetraodon_nigroviridis
ENSPKIG00000023171	hbs1l	89	83.333	ENSTBEG00000009950	HBS1L	83	83.333	Tupaia_belangeri
ENSPKIG00000023171	hbs1l	99	71.304	ENSTTRG00000003715	HBS1L	99	70.435	Tursiops_truncatus
ENSPKIG00000023171	hbs1l	100	72.279	ENSUAMG00000001064	HBS1L	100	71.408	Ursus_americanus
ENSPKIG00000023171	hbs1l	100	72.134	ENSUMAG00000024395	HBS1L	100	81.081	Ursus_maritimus
ENSPKIG00000023171	hbs1l	96	78.652	ENSVPAG00000006280	HBS1L	89	79.439	Vicugna_pacos
ENSPKIG00000023171	hbs1l	100	72.279	ENSVVUG00000000295	HBS1L	100	71.408	Vulpes_vulpes
ENSPKIG00000023171	hbs1l	100	71.283	ENSXETG00000003726	hbs1l	100	71.283	Xenopus_tropicalis
ENSPKIG00000023171	hbs1l	99	74.453	ENSXCOG00000005323	hbs1l	99	79.545	Xiphophorus_couchianus
ENSPKIG00000023171	hbs1l	100	73.257	ENSXMAG00000004359	hbs1l	98	79.356	Xiphophorus_maculatus