EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000023186 (Gene tree)
Gene ID: 111856117
Gene Symbol: casc3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 12777 bases
Position: chrPGUA01000301.1:583166-595942
Accession: 111856117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000007187	Btz	PF09405.10	9.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000031232	-	4932	-	ENSPKIP00000007187	768 (aa)	XP_023691566	UPI000CD623A9

Gene Model

Click here to download ENSPKIG00000023186's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03013	RNA transport	KEGG
pki03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000023186's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000023186	casc3	98	46.667	ENSAMEG00000007764	CASC3	99	48.116	Ailuropoda_melanoleuca
ENSPKIG00000023186	casc3	59	71.831	ENSACIG00000000720	casc3	75	67.296	Amphilophus_citrinellus
ENSPKIG00000023186	casc3	91	46.271	ENSACAG00000002674	CASC3	85	47.479	Anolis_carolinensis
ENSPKIG00000023186	casc3	60	66.509	ENSANAG00000031954	-	98	69.340	Aotus_nancymaae
ENSPKIG00000023186	casc3	92	43.036	ENSANAG00000034820	-	97	44.430	Aotus_nancymaae
ENSPKIG00000023186	casc3	97	60.682	ENSAMXG00000032452	casc3	98	59.144	Astyanax_mexicanus
ENSPKIG00000023186	casc3	98	46.523	ENSBTAG00000006250	CASC3	99	46.910	Bos_taurus
ENSPKIG00000023186	casc3	99	45.891	ENSCJAG00000016032	CASC3	99	48.035	Callithrix_jacchus
ENSPKIG00000023186	casc3	98	45.786	ENSCAFG00000016141	CASC3	99	47.870	Canis_familiaris
ENSPKIG00000023186	casc3	98	45.226	ENSCAFG00020018882	CASC3	83	57.386	Canis_lupus_dingo
ENSPKIG00000023186	casc3	90	46.499	ENSTSYG00000002975	CASC3	88	48.945	Carlito_syrichta
ENSPKIG00000023186	casc3	79	48.320	ENSCAPG00000010514	CASC3	99	48.074	Cavia_aperea
ENSPKIG00000023186	casc3	98	43.869	ENSCPOG00000015139	CASC3	99	47.959	Cavia_porcellus
ENSPKIG00000023186	casc3	98	45.943	ENSCCAG00000033620	CASC3	99	48.185	Cebus_capucinus
ENSPKIG00000023186	casc3	98	44.707	ENSCLAG00000013730	CASC3	99	47.919	Chinchilla_lanigera
ENSPKIG00000023186	casc3	98	47.487	ENSCPBG00000004750	CASC3	95	49.721	Chrysemys_picta_bellii
ENSPKIG00000023186	casc3	98	45.970	ENSCGRG00001014706	Casc3	99	48.367	Cricetulus_griseus_chok1gshd
ENSPKIG00000023186	casc3	98	45.373	ENSCGRG00000001952	Casc3	95	47.905	Cricetulus_griseus_crigri
ENSPKIG00000023186	casc3	97	60.365	ENSDARG00000029911	casc3	98	60.746	Danio_rerio
ENSPKIG00000023186	casc3	98	46.212	ENSDNOG00000017249	CASC3	95	47.985	Dasypus_novemcinctus
ENSPKIG00000023186	casc3	98	43.522	ENSETEG00000013720	CASC3	99	45.432	Echinops_telfairi
ENSPKIG00000023186	casc3	77	41.404	ENSEBUG00000010654	casc3	78	38.914	Eptatretus_burgeri
ENSPKIG00000023186	casc3	98	44.981	ENSEASG00005002909	CASC3	94	60.360	Equus_asinus_asinus
ENSPKIG00000023186	casc3	98	45.533	ENSECAG00000019947	CASC3	87	47.421	Equus_caballus
ENSPKIG00000023186	casc3	74	39.635	ENSEEUG00000014253	CASC3	100	38.806	Erinaceus_europaeus
ENSPKIG00000023186	casc3	97	55.402	ENSELUG00000015093	casc3	99	55.831	Esox_lucius
ENSPKIG00000023186	casc3	92	45.602	ENSFALG00000000412	CASC3	99	46.803	Ficedula_albicollis
ENSPKIG00000023186	casc3	92	44.751	ENSFDAG00000020696	CASC3	94	47.532	Fukomys_damarensis
ENSPKIG00000023186	casc3	93	48.452	ENSGALG00000031813	CASC3	95	48.974	Gallus_gallus
ENSPKIG00000023186	casc3	80	51.108	ENSGAGG00000008432	CASC3	92	60.294	Gopherus_agassizii
ENSPKIG00000023186	casc3	98	44.486	ENSGGOG00000005067	CASC3	99	48.489	Gorilla_gorilla
ENSPKIG00000023186	casc3	98	45.765	ENSHGLG00000012117	CASC3	99	47.799	Heterocephalus_glaber_female
ENSPKIG00000023186	casc3	90	47.405	ENSHGLG00100002268	CASC3	98	48.599	Heterocephalus_glaber_male
ENSPKIG00000023186	casc3	97	49.802	ENSHCOG00000002664	casc3	99	50.323	Hippocampus_comes
ENSPKIG00000023186	casc3	97	56.711	ENSIPUG00000002679	casc3	98	57.902	Ictalurus_punctatus
ENSPKIG00000023186	casc3	82	49.160	ENSSTOG00000006374	CASC3	99	47.990	Ictidomys_tridecemlineatus
ENSPKIG00000023186	casc3	98	44.994	ENSJJAG00000023525	Casc3	99	46.096	Jaculus_jaculus
ENSPKIG00000023186	casc3	77	61.337	ENSKMAG00000019507	casc3	99	52.217	Kryptolebias_marmoratus
ENSPKIG00000023186	casc3	79	52.879	ENSLBEG00000005435	casc3	99	51.671	Labrus_bergylta
ENSPKIG00000023186	casc3	90	47.059	ENSLACG00000013200	CASC3	87	47.265	Latimeria_chalumnae
ENSPKIG00000023186	casc3	73	70.357	ENSLOCG00000013518	casc3	76	70.357	Lepisosteus_oculatus
ENSPKIG00000023186	casc3	77	56.918	ENSMFAG00000041496	CASC3	94	60.180	Macaca_fascicularis
ENSPKIG00000023186	casc3	80	50.000	ENSMGAG00000013247	CASC3	99	49.644	Meleagris_gallopavo
ENSPKIG00000023186	casc3	72	47.018	ENSMAUG00000006023	Casc3	79	49.378	Mesocricetus_auratus
ENSPKIG00000023186	casc3	80	50.000	ENSMICG00000003321	CASC3	87	49.157	Microcebus_murinus
ENSPKIG00000023186	casc3	98	46.203	ENSMOCG00000013644	Casc3	99	48.111	Microtus_ochrogaster
ENSPKIG00000023186	casc3	80	48.352	ENSMODG00000013044	CASC3	91	48.148	Monodelphis_domestica
ENSPKIG00000023186	casc3	54	80.198	ENSMALG00000019771	casc3	72	72.800	Monopterus_albus
ENSPKIG00000023186	casc3	98	46.582	MGP_CAROLIEiJ_G0017099	Casc3	99	47.727	Mus_caroli
ENSPKIG00000023186	casc3	98	46.709	ENSMUSG00000078676	Casc3	99	47.854	Mus_musculus
ENSPKIG00000023186	casc3	98	46.582	MGP_SPRETEiJ_G0017943	Casc3	99	47.727	Mus_spretus
ENSPKIG00000023186	casc3	98	46.910	ENSMPUG00000014903	CASC3	99	47.925	Mustela_putorius_furo
ENSPKIG00000023186	casc3	98	46.028	ENSMLUG00000010520	CASC3	99	47.163	Myotis_lucifugus
ENSPKIG00000023186	casc3	79	49.280	ENSNGAG00000023121	Casc3	88	47.679	Nannospalax_galili
ENSPKIG00000023186	casc3	98	45.557	ENSNLEG00000001598	CASC3	99	48.550	Nomascus_leucogenys
ENSPKIG00000023186	casc3	82	67.114	ENSMEUG00000015662	CASC3	100	40.897	Notamacropus_eugenii
ENSPKIG00000023186	casc3	57	40.222	ENSOPRG00000007240	-	75	39.399	Ochotona_princeps
ENSPKIG00000023186	casc3	98	45.262	ENSODEG00000017858	CASC3	99	47.342	Octodon_degus
ENSPKIG00000023186	casc3	73	64.577	ENSONIG00000009337	casc3	99	53.725	Oreochromis_niloticus
ENSPKIG00000023186	casc3	98	46.028	ENSOCUG00000002954	CASC3	99	47.170	Oryctolagus_cuniculus
ENSPKIG00000023186	casc3	99	45.209	ENSOGAG00000034486	CASC3	99	47.649	Otolemur_garnettii
ENSPKIG00000023186	casc3	98	44.962	ENSPEMG00000009774	Casc3	99	48.367	Peromyscus_maniculatus_bairdii
ENSPKIG00000023186	casc3	98	45.603	ENSPCIG00000025678	CASC3	99	48.025	Phascolarctos_cinereus
ENSPKIG00000023186	casc3	94	52.368	ENSPFOG00000017632	casc3	98	52.750	Poecilia_formosa
ENSPKIG00000023186	casc3	94	51.579	ENSPLAG00000005268	casc3	99	52.956	Poecilia_latipinna
ENSPKIG00000023186	casc3	59	73.188	ENSPREG00000011856	casc3	90	52.744	Poecilia_reticulata
ENSPKIG00000023186	casc3	97	61.942	ENSPNAG00000015928	casc3	98	62.257	Pygocentrus_nattereri
ENSPKIG00000023186	casc3	79	56.805	ENSRNOG00000009716	Casc3	93	59.159	Rattus_norvegicus
ENSPKIG00000023186	casc3	90	48.387	ENSSHAG00000013338	CASC3	98	49.008	Sarcophilus_harrisii
ENSPKIG00000023186	casc3	99	72.526	ENSSFOG00015002645	casc3	99	73.935	Scleropages_formosus
ENSPKIG00000023186	casc3	58	75.373	ENSSLDG00000020308	casc3	99	59.654	Seriola_lalandi_dorsalis
ENSPKIG00000023186	casc3	53	57.057	ENSSARG00000010378	CASC3	64	63.235	Sorex_araneus
ENSPKIG00000023186	casc3	74	47.811	ENSTGUG00000002300	CASC3	99	49.057	Taeniopygia_guttata
ENSPKIG00000023186	casc3	92	52.732	ENSTRUG00000000673	casc3	99	52.658	Takifugu_rubripes
ENSPKIG00000023186	casc3	60	66.986	ENSTBEG00000017459	CASC3	65	69.378	Tupaia_belangeri
ENSPKIG00000023186	casc3	50	56.731	ENSTTRG00000016896	CASC3	62	64.706	Tursiops_truncatus
ENSPKIG00000023186	casc3	77	58.654	ENSUAMG00000015116	CASC3	97	56.374	Ursus_americanus
ENSPKIG00000023186	casc3	61	59.259	ENSUMAG00000017697	CASC3	92	64.189	Ursus_maritimus
ENSPKIG00000023186	casc3	62	64.407	ENSVPAG00000000799	CASC3	60	67.257	Vicugna_pacos
ENSPKIG00000023186	casc3	98	45.786	ENSVVUG00000000997	CASC3	99	47.613	Vulpes_vulpes
ENSPKIG00000023186	casc3	93	45.055	ENSXETG00000024395	casc3	99	46.154	Xenopus_tropicalis