EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000023453 (Gene tree)
Gene ID: 111833305
Gene Symbol: rbm28
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 19240 bases
Position: chrPGUA01000045.1:2337064-2356303
Accession: 111833305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000007636	RRM_1	PF00076.22	7.4e-58	1	4
ENSPKIP00000007636	RRM_1	PF00076.22	7.4e-58	2	4
ENSPKIP00000007636	RRM_1	PF00076.22	7.4e-58	3	4
ENSPKIP00000007636	RRM_1	PF00076.22	7.4e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000031700	-	6624	-	ENSPKIP00000007636	774 (aa)	XP_023647235	UPI000CD654D8

Gene Model

Click here to download ENSPKIG00000023453's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000023453's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000023453	rbm28	72	57.500	ENSG00000106344	RBM28	99	57.500	Homo_sapiens
ENSPKIG00000023453	rbm28	61	58.455	ENSAPOG00000015512	rbm28	99	55.459	Acanthochromis_polyacanthus
ENSPKIG00000023453	rbm28	97	62.069	ENSAMEG00000004776	RBM28	89	61.538	Ailuropoda_melanoleuca
ENSPKIG00000023453	rbm28	60	55.844	ENSACIG00000023153	rbm28	91	56.277	Amphilophus_citrinellus
ENSPKIG00000023453	rbm28	61	58.873	ENSAOCG00000000462	rbm28	99	56.010	Amphiprion_ocellaris
ENSPKIG00000023453	rbm28	61	58.664	ENSAPEG00000012996	rbm28	99	56.522	Amphiprion_percula
ENSPKIG00000023453	rbm28	62	54.733	ENSATEG00000001672	rbm28	89	58.191	Anabas_testudineus
ENSPKIG00000023453	rbm28	94	57.500	ENSANAG00000033922	RBM28	99	57.500	Aotus_nancymaae
ENSPKIG00000023453	rbm28	99	53.695	ENSACLG00000025024	rbm28	99	54.827	Astatotilapia_calliptera
ENSPKIG00000023453	rbm28	62	55.187	ENSAMXG00000000763	rbm28	99	56.432	Astyanax_mexicanus
ENSPKIG00000023453	rbm28	77	57.500	ENSBTAG00000017001	RBM28	99	57.500	Bos_taurus
ENSPKIG00000023453	rbm28	88	57.500	ENSCJAG00000017731	RBM28	99	57.500	Callithrix_jacchus
ENSPKIG00000023453	rbm28	99	49.814	ENSCAFG00000001667	RBM28	99	50.809	Canis_familiaris
ENSPKIG00000023453	rbm28	99	49.814	ENSCAFG00020021648	RBM28	99	50.809	Canis_lupus_dingo
ENSPKIG00000023453	rbm28	99	51.189	ENSCHIG00000014146	RBM28	99	51.617	Capra_hircus
ENSPKIG00000023453	rbm28	70	55.000	ENSTSYG00000002892	RBM28	99	55.000	Carlito_syrichta
ENSPKIG00000023453	rbm28	82	40.123	ENSCAPG00000013218	RBM28	94	39.780	Cavia_aperea
ENSPKIG00000023453	rbm28	65	52.559	ENSCPOG00000006253	RBM28	99	50.185	Cavia_porcellus
ENSPKIG00000023453	rbm28	87	57.500	ENSCCAG00000035105	RBM28	99	57.500	Cebus_capucinus
ENSPKIG00000023453	rbm28	72	57.500	ENSCATG00000040497	RBM28	99	57.500	Cercocebus_atys
ENSPKIG00000023453	rbm28	64	51.992	ENSCLAG00000003707	RBM28	99	48.500	Chinchilla_lanigera
ENSPKIG00000023453	rbm28	67	51.619	ENSCSAG00000010161	RBM28	99	50.433	Chlorocebus_sabaeus
ENSPKIG00000023453	rbm28	60	60.484	ENSCHOG00000001994	-	63	58.871	Choloepus_hoffmanni
ENSPKIG00000023453	rbm28	57	54.286	ENSCPBG00000018088	RBM28	76	56.127	Chrysemys_picta_bellii
ENSPKIG00000023453	rbm28	95	38.710	ENSCING00000009238	-	83	38.551	Ciona_intestinalis
ENSPKIG00000023453	rbm28	94	51.986	ENSCANG00000038397	RBM28	92	57.500	Colobus_angolensis_palliatus
ENSPKIG00000023453	rbm28	67	51.527	ENSCGRG00001021278	Rbm28	99	51.146	Cricetulus_griseus_chok1gshd
ENSPKIG00000023453	rbm28	67	51.527	ENSCGRG00000005098	Rbm28	99	51.852	Cricetulus_griseus_crigri
ENSPKIG00000023453	rbm28	99	54.151	ENSCSEG00000004212	rbm28	99	54.501	Cynoglossus_semilaevis
ENSPKIG00000023453	rbm28	62	56.996	ENSCVAG00000010493	rbm28	100	52.340	Cyprinodon_variegatus
ENSPKIG00000023453	rbm28	99	52.137	ENSDARG00000025332	rbm28	99	52.137	Danio_rerio
ENSPKIG00000023453	rbm28	99	50.677	ENSDNOG00000001124	RBM28	99	50.746	Dasypus_novemcinctus
ENSPKIG00000023453	rbm28	77	50.943	ENSDORG00000004184	Rbm28	85	53.112	Dipodomys_ordii
ENSPKIG00000023453	rbm28	63	37.551	FBgn0260456	CG4806	70	36.111	Drosophila_melanogaster
ENSPKIG00000023453	rbm28	60	49.677	ENSETEG00000007130	RBM28	55	49.032	Echinops_telfairi
ENSPKIG00000023453	rbm28	89	44.071	ENSEBUG00000004419	rbm28	99	38.501	Eptatretus_burgeri
ENSPKIG00000023453	rbm28	99	50.365	ENSEASG00005008528	RBM28	99	51.711	Equus_asinus_asinus
ENSPKIG00000023453	rbm28	99	50.304	ENSECAG00000007745	RBM28	99	51.648	Equus_caballus
ENSPKIG00000023453	rbm28	99	48.843	ENSEEUG00000002389	RBM28	99	49.752	Erinaceus_europaeus
ENSPKIG00000023453	rbm28	99	56.967	ENSELUG00000020602	rbm28	99	58.045	Esox_lucius
ENSPKIG00000023453	rbm28	99	50.558	ENSFCAG00000000946	RBM28	99	57.500	Felis_catus
ENSPKIG00000023453	rbm28	99	50.868	ENSFDAG00000010169	RBM28	99	51.195	Fukomys_damarensis
ENSPKIG00000023453	rbm28	97	54.630	ENSGMOG00000007091	rbm28	99	60.245	Gadus_morhua
ENSPKIG00000023453	rbm28	62	55.992	ENSGAFG00000004802	rbm28	96	57.526	Gambusia_affinis
ENSPKIG00000023453	rbm28	61	55.925	ENSGACG00000012612	rbm28	99	54.685	Gasterosteus_aculeatus
ENSPKIG00000023453	rbm28	65	67.760	ENSGAGG00000008873	RBM28	73	69.231	Gopherus_agassizii
ENSPKIG00000023453	rbm28	95	50.458	ENSGGOG00000004644	RBM28	97	51.044	Gorilla_gorilla
ENSPKIG00000023453	rbm28	95	53.299	ENSHBUG00000009611	rbm28	99	54.510	Haplochromis_burtoni
ENSPKIG00000023453	rbm28	99	51.015	ENSHGLG00000005409	RBM28	99	50.818	Heterocephalus_glaber_female
ENSPKIG00000023453	rbm28	99	51.015	ENSHGLG00100016458	RBM28	99	50.818	Heterocephalus_glaber_male
ENSPKIG00000023453	rbm28	87	48.624	ENSHCOG00000010597	rbm28	99	42.768	Hippocampus_comes
ENSPKIG00000023453	rbm28	65	46.032	ENSIPUG00000007103	rbm28	81	47.537	Ictalurus_punctatus
ENSPKIG00000023453	rbm28	99	50.548	ENSSTOG00000002169	RBM28	99	51.232	Ictidomys_tridecemlineatus
ENSPKIG00000023453	rbm28	60	52.258	ENSJJAG00000022400	Rbm28	99	47.475	Jaculus_jaculus
ENSPKIG00000023453	rbm28	100	53.558	ENSKMAG00000013348	rbm28	94	61.969	Kryptolebias_marmoratus
ENSPKIG00000023453	rbm28	62	56.612	ENSLBEG00000012998	rbm28	100	54.424	Labrus_bergylta
ENSPKIG00000023453	rbm28	99	60.766	ENSLOCG00000015541	rbm28	99	66.495	Lepisosteus_oculatus
ENSPKIG00000023453	rbm28	99	50.308	ENSLAFG00000010717	RBM28	99	50.680	Loxodonta_africana
ENSPKIG00000023453	rbm28	72	57.500	ENSMFAG00000031036	RBM28	99	57.500	Macaca_fascicularis
ENSPKIG00000023453	rbm28	99	44.940	ENSMMUG00000007250	RBM28	99	57.500	Macaca_mulatta
ENSPKIG00000023453	rbm28	99	50.820	ENSMNEG00000036970	RBM28	99	57.500	Macaca_nemestrina
ENSPKIG00000023453	rbm28	72	51.534	ENSMLEG00000037717	RBM28	92	53.830	Mandrillus_leucophaeus
ENSPKIG00000023453	rbm28	99	53.837	ENSMAMG00000008525	rbm28	99	55.514	Mastacembelus_armatus
ENSPKIG00000023453	rbm28	93	52.701	ENSMZEG00005019625	rbm28	99	54.040	Maylandia_zebra
ENSPKIG00000023453	rbm28	67	51.141	ENSMAUG00000002263	Rbm28	99	51.456	Mesocricetus_auratus
ENSPKIG00000023453	rbm28	66	50.755	ENSMICG00000000107	RBM28	99	48.177	Microcebus_murinus
ENSPKIG00000023453	rbm28	99	50.875	ENSMOCG00000014615	Rbm28	99	51.681	Microtus_ochrogaster
ENSPKIG00000023453	rbm28	57	64.000	ENSMMOG00000008600	rbm28	89	69.965	Mola_mola
ENSPKIG00000023453	rbm28	65	52.734	ENSMODG00000015151	RBM28	99	50.428	Monodelphis_domestica
ENSPKIG00000023453	rbm28	62	57.438	ENSMALG00000006419	rbm28	99	53.799	Monopterus_albus
ENSPKIG00000023453	rbm28	99	51.741	MGP_CAROLIEiJ_G0028162	Rbm28	99	51.244	Mus_caroli
ENSPKIG00000023453	rbm28	99	51.677	ENSMUSG00000029701	Rbm28	99	51.750	Mus_musculus
ENSPKIG00000023453	rbm28	99	51.625	MGP_PahariEiJ_G0021920	Rbm28	99	51.746	Mus_pahari
ENSPKIG00000023453	rbm28	99	51.429	MGP_SPRETEiJ_G0029162	Rbm28	99	51.500	Mus_spretus
ENSPKIG00000023453	rbm28	99	51.225	ENSMPUG00000006511	RBM28	99	51.728	Mustela_putorius_furo
ENSPKIG00000023453	rbm28	67	50.577	ENSMLUG00000002186	RBM28	99	50.305	Myotis_lucifugus
ENSPKIG00000023453	rbm28	99	51.580	ENSNGAG00000006480	-	99	51.588	Nannospalax_galili
ENSPKIG00000023453	rbm28	99	47.724	ENSNGAG00000017946	-	95	54.714	Nannospalax_galili
ENSPKIG00000023453	rbm28	73	57.500	ENSNLEG00000012307	RBM28	99	57.500	Nomascus_leucogenys
ENSPKIG00000023453	rbm28	84	67.742	ENSMEUG00000009611	RBM28	82	67.742	Notamacropus_eugenii
ENSPKIG00000023453	rbm28	76	55.257	ENSODEG00000013217	-	80	54.067	Octodon_degus
ENSPKIG00000023453	rbm28	99	49.627	ENSODEG00000003213	-	99	48.632	Octodon_degus
ENSPKIG00000023453	rbm28	62	54.959	ENSONIG00000014924	rbm28	99	54.110	Oreochromis_niloticus
ENSPKIG00000023453	rbm28	99	48.208	ENSOANG00000000815	-	99	48.103	Ornithorhynchus_anatinus
ENSPKIG00000023453	rbm28	68	51.412	ENSOCUG00000003009	RBM28	99	50.368	Oryctolagus_cuniculus
ENSPKIG00000023453	rbm28	100	53.051	ENSORLG00000009636	rbm28	100	53.117	Oryzias_latipes
ENSPKIG00000023453	rbm28	84	55.894	ENSORLG00020002123	rbm28	100	55.458	Oryzias_latipes_hni
ENSPKIG00000023453	rbm28	87	65.672	ENSORLG00015015030	rbm28	100	65.672	Oryzias_latipes_hsok
ENSPKIG00000023453	rbm28	62	57.084	ENSOMEG00000007801	rbm28	99	56.516	Oryzias_melastigma
ENSPKIG00000023453	rbm28	83	55.000	ENSOGAG00000006011	RBM28	99	55.000	Otolemur_garnettii
ENSPKIG00000023453	rbm28	99	51.493	ENSOARG00000002547	RBM28	99	51.375	Ovis_aries
ENSPKIG00000023453	rbm28	72	57.500	ENSPPAG00000041730	RBM28	99	57.500	Pan_paniscus
ENSPKIG00000023453	rbm28	99	50.630	ENSPPRG00000004420	RBM28	99	57.500	Panthera_pardus
ENSPKIG00000023453	rbm28	99	51.195	ENSPTIG00000008550	RBM28	99	57.500	Panthera_tigris_altaica
ENSPKIG00000023453	rbm28	72	57.500	ENSPTRG00000019659	RBM28	99	57.500	Pan_troglodytes
ENSPKIG00000023453	rbm28	72	57.500	ENSPANG00000022295	RBM28	99	57.500	Papio_anubis
ENSPKIG00000023453	rbm28	55	64.401	ENSPMGG00000012840	rbm28	99	56.180	Periophthalmus_magnuspinnatus
ENSPKIG00000023453	rbm28	99	50.638	ENSPEMG00000020673	Rbm28	99	51.523	Peromyscus_maniculatus_bairdii
ENSPKIG00000023453	rbm28	52	40.241	ENSPMAG00000002948	-	99	40.964	Petromyzon_marinus
ENSPKIG00000023453	rbm28	99	51.685	ENSPCIG00000012810	RBM28	99	51.685	Phascolarctos_cinereus
ENSPKIG00000023453	rbm28	62	56.432	ENSPFOG00000018209	rbm28	99	54.715	Poecilia_formosa
ENSPKIG00000023453	rbm28	60	56.930	ENSPLAG00000016078	rbm28	95	54.545	Poecilia_latipinna
ENSPKIG00000023453	rbm28	62	56.224	ENSPMEG00000004292	rbm28	100	53.916	Poecilia_mexicana
ENSPKIG00000023453	rbm28	98	53.652	ENSPREG00000014287	rbm28	98	54.545	Poecilia_reticulata
ENSPKIG00000023453	rbm28	67	50.857	ENSPPYG00000017975	RBM28	99	50.993	Pongo_abelii
ENSPKIG00000023453	rbm28	77	49.754	ENSPCAG00000008223	RBM28	82	49.261	Procavia_capensis
ENSPKIG00000023453	rbm28	85	57.500	ENSPCOG00000016797	RBM28	99	57.500	Propithecus_coquereli
ENSPKIG00000023453	rbm28	68	65.829	ENSPVAG00000005443	RBM28	67	65.829	Pteropus_vampyrus
ENSPKIG00000023453	rbm28	99	53.276	ENSPNYG00000014003	rbm28	99	54.523	Pundamilia_nyererei
ENSPKIG00000023453	rbm28	99	51.504	ENSRNOG00000005468	Rbm28	99	51.553	Rattus_norvegicus
ENSPKIG00000023453	rbm28	72	57.500	ENSRBIG00000033990	RBM28	99	57.500	Rhinopithecus_bieti
ENSPKIG00000023453	rbm28	72	57.500	ENSRROG00000040747	RBM28	99	57.500	Rhinopithecus_roxellana
ENSPKIG00000023453	rbm28	91	48.294	ENSSBOG00000012308	RBM28	99	49.606	Saimiri_boliviensis_boliviensis
ENSPKIG00000023453	rbm28	96	49.020	ENSSHAG00000017017	RBM28	97	49.001	Sarcophilus_harrisii
ENSPKIG00000023453	rbm28	87	69.772	ENSSFOG00015001231	rbm28	99	60.897	Scleropages_formosus
ENSPKIG00000023453	rbm28	62	53.455	ENSSMAG00000003885	rbm28	97	52.481	Scophthalmus_maximus
ENSPKIG00000023453	rbm28	62	58.282	ENSSDUG00000014270	rbm28	99	53.125	Seriola_dumerili
ENSPKIG00000023453	rbm28	62	57.669	ENSSLDG00000020099	rbm28	99	53.865	Seriola_lalandi_dorsalis
ENSPKIG00000023453	rbm28	77	57.609	ENSSARG00000008303	RBM28	78	59.444	Sorex_araneus
ENSPKIG00000023453	rbm28	85	43.427	ENSSPUG00000000838	RBM28	90	50.214	Sphenodon_punctatus
ENSPKIG00000023453	rbm28	61	58.351	ENSSPAG00000023305	rbm28	99	53.479	Stegastes_partitus
ENSPKIG00000023453	rbm28	99	52.363	ENSSSCG00000031847	RBM28	99	51.238	Sus_scrofa
ENSPKIG00000023453	rbm28	99	51.665	ENSTRUG00000013311	rbm28	99	52.580	Takifugu_rubripes
ENSPKIG00000023453	rbm28	99	53.683	ENSTNIG00000017962	rbm28	99	53.317	Tetraodon_nigroviridis
ENSPKIG00000023453	rbm28	82	54.802	ENSTBEG00000012749	RBM28	83	54.396	Tupaia_belangeri
ENSPKIG00000023453	rbm28	99	50.801	ENSTTRG00000013647	RBM28	86	60.633	Tursiops_truncatus
ENSPKIG00000023453	rbm28	99	47.750	ENSUAMG00000006949	RBM28	99	48.391	Ursus_americanus
ENSPKIG00000023453	rbm28	99	50.062	ENSUMAG00000005997	RBM28	99	51.493	Ursus_maritimus
ENSPKIG00000023453	rbm28	86	46.210	ENSVPAG00000008304	RBM28	87	46.459	Vicugna_pacos
ENSPKIG00000023453	rbm28	99	49.814	ENSVVUG00000007270	RBM28	99	51.429	Vulpes_vulpes
ENSPKIG00000023453	rbm28	99	48.582	ENSXETG00000009271	rbm28	99	48.221	Xenopus_tropicalis
ENSPKIG00000023453	rbm28	62	53.112	ENSXCOG00000020357	rbm28	91	53.830	Xiphophorus_couchianus
ENSPKIG00000023453	rbm28	60	57.447	ENSXMAG00000004415	rbm28	98	54.835	Xiphophorus_maculatus