EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000023494 (Gene tree)
Gene ID: 111833281
Gene Symbol: snd1
Alias: -
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 139506 bases
Position: chrPGUA01000045.1:2566975-2706480
Accession: 111833281
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000007707	TUDOR	PF00567.24	8.7e-24	1	1
ENSPKIP00000007734	TUDOR	PF00567.24	9.5e-24	1	1
ENSPKIP00000007707	SNase	PF00565.17	1.1e-64	1	5
ENSPKIP00000007707	SNase	PF00565.17	1.1e-64	2	5
ENSPKIP00000007707	SNase	PF00565.17	1.1e-64	3	5
ENSPKIP00000007707	SNase	PF00565.17	1.1e-64	4	5
ENSPKIP00000007707	SNase	PF00565.17	1.1e-64	5	5
ENSPKIP00000007734	SNase	PF00565.17	2.5e-58	1	4
ENSPKIP00000007734	SNase	PF00565.17	2.5e-58	2	4
ENSPKIP00000007734	SNase	PF00565.17	2.5e-58	3	4
ENSPKIP00000007734	SNase	PF00565.17	2.5e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000031773	-	2760	XM_023791412	ENSPKIP00000007707	919 (aa)	XP_023647180	UPI000CD5E6E1
ENSPKIT00000031800	-	3743	-	ENSPKIP00000007734	960 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000023494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000023494's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000023494	snd1	98	81.798	ENSG00000197157	SND1	99	81.477	Homo_sapiens
ENSPKIG00000023494	snd1	99	86.587	ENSAPOG00000017599	snd1	99	86.990	Acanthochromis_polyacanthus
ENSPKIG00000023494	snd1	100	80.673	ENSAMEG00000004664	SND1	93	81.408	Ailuropoda_melanoleuca
ENSPKIG00000023494	snd1	98	84.795	ENSACIG00000003551	snd1	99	84.564	Amphilophus_citrinellus
ENSPKIG00000023494	snd1	99	86.587	ENSAOCG00000014166	snd1	99	87.100	Amphiprion_ocellaris
ENSPKIG00000023494	snd1	99	86.587	ENSAPEG00000007067	snd1	99	87.004	Amphiprion_percula
ENSPKIG00000023494	snd1	98	85.889	ENSATEG00000018475	snd1	88	86.292	Anabas_testudineus
ENSPKIG00000023494	snd1	98	81.798	ENSANAG00000034463	SND1	99	81.747	Aotus_nancymaae
ENSPKIG00000023494	snd1	99	86.260	ENSACLG00000022897	snd1	99	86.865	Astatotilapia_calliptera
ENSPKIG00000023494	snd1	100	87.378	ENSAMXG00000016318	snd1	99	87.996	Astyanax_mexicanus
ENSPKIG00000023494	snd1	98	82.020	ENSBTAG00000010692	SND1	99	81.698	Bos_taurus
ENSPKIG00000023494	snd1	98	45.307	WBGene00006626	tsn-1	97	45.464	Caenorhabditis_elegans
ENSPKIG00000023494	snd1	98	81.909	ENSCJAG00000017668	SND1	99	81.859	Callithrix_jacchus
ENSPKIG00000023494	snd1	100	80.849	ENSCAFG00000001700	SND1	99	81.588	Canis_familiaris
ENSPKIG00000023494	snd1	100	80.849	ENSCAFG00020021639	SND1	99	81.588	Canis_lupus_dingo
ENSPKIG00000023494	snd1	98	82.131	ENSCHIG00000023390	SND1	100	81.057	Capra_hircus
ENSPKIG00000023494	snd1	71	85.269	ENSTSYG00000004979	SND1	96	85.269	Carlito_syrichta
ENSPKIG00000023494	snd1	100	70.141	ENSCAPG00000010677	SND1	97	71.508	Cavia_aperea
ENSPKIG00000023494	snd1	98	81.576	ENSCPOG00000006251	SND1	99	81.257	Cavia_porcellus
ENSPKIG00000023494	snd1	98	81.798	ENSCCAG00000036847	SND1	99	81.477	Cebus_capucinus
ENSPKIG00000023494	snd1	98	81.909	ENSCATG00000035214	SND1	99	81.859	Cercocebus_atys
ENSPKIG00000023494	snd1	98	81.798	ENSCLAG00000011796	SND1	96	84.602	Chinchilla_lanigera
ENSPKIG00000023494	snd1	98	81.909	ENSCSAG00000010182	SND1	99	81.588	Chlorocebus_sabaeus
ENSPKIG00000023494	snd1	78	65.347	ENSCHOG00000002218	SND1	86	65.347	Choloepus_hoffmanni
ENSPKIG00000023494	snd1	100	81.433	ENSCPBG00000018094	SND1	99	82.048	Chrysemys_picta_bellii
ENSPKIG00000023494	snd1	98	55.837	ENSCING00000000524	-	99	55.556	Ciona_intestinalis
ENSPKIG00000023494	snd1	99	56.257	ENSCSAVG00000008807	-	98	56.811	Ciona_savignyi
ENSPKIG00000023494	snd1	98	81.909	ENSCANG00000035119	SND1	99	81.588	Colobus_angolensis_palliatus
ENSPKIG00000023494	snd1	98	81.354	ENSCGRG00001022514	Snd1	96	83.980	Cricetulus_griseus_chok1gshd
ENSPKIG00000023494	snd1	97	81.299	ENSCGRG00000012277	Snd1	99	81.299	Cricetulus_griseus_crigri
ENSPKIG00000023494	snd1	99	85.278	ENSCSEG00000008661	snd1	99	85.557	Cynoglossus_semilaevis
ENSPKIG00000023494	snd1	99	86.150	ENSCVAG00000010316	snd1	99	86.549	Cyprinodon_variegatus
ENSPKIG00000023494	snd1	100	86.181	ENSDARG00000006766	snd1	95	92.043	Danio_rerio
ENSPKIG00000023494	snd1	97	79.799	ENSDNOG00000006795	SND1	100	79.799	Dasypus_novemcinctus
ENSPKIG00000023494	snd1	98	81.576	ENSDORG00000000336	Snd1	99	81.257	Dipodomys_ordii
ENSPKIG00000023494	snd1	97	49.564	FBgn0035121	Tudor-SN	97	49.565	Drosophila_melanogaster
ENSPKIG00000023494	snd1	90	86.111	ENSETEG00000000375	SND1	92	86.111	Echinops_telfairi
ENSPKIG00000023494	snd1	61	65.608	ENSEBUG00000014201	-	84	74.866	Eptatretus_burgeri
ENSPKIG00000023494	snd1	98	80.832	ENSEASG00005008513	SND1	99	80.522	Equus_asinus_asinus
ENSPKIG00000023494	snd1	98	81.687	ENSECAG00000011451	SND1	99	81.367	Equus_caballus
ENSPKIG00000023494	snd1	98	73.030	ENSEEUG00000014737	SND1	99	72.767	Erinaceus_europaeus
ENSPKIG00000023494	snd1	99	85.605	ENSELUG00000001805	snd1	95	85.651	Esox_lucius
ENSPKIG00000023494	snd1	100	80.849	ENSFCAG00000008289	SND1	99	81.588	Felis_catus
ENSPKIG00000023494	snd1	98	81.687	ENSFDAG00000015881	SND1	99	81.367	Fukomys_damarensis
ENSPKIG00000023494	snd1	99	84.418	ENSFHEG00000004093	snd1	98	87.026	Fundulus_heteroclitus
ENSPKIG00000023494	snd1	75	75.424	ENSGMOG00000018932	snd1	64	75.424	Gadus_morhua
ENSPKIG00000023494	snd1	99	86.150	ENSGAFG00000008421	snd1	99	86.913	Gambusia_affinis
ENSPKIG00000023494	snd1	99	55.771	ENSGACG00000019793	snd1	99	55.834	Gasterosteus_aculeatus
ENSPKIG00000023494	snd1	98	81.798	ENSGGOG00000009614	SND1	99	81.747	Gorilla_gorilla
ENSPKIG00000023494	snd1	99	86.230	ENSHBUG00000019135	snd1	99	86.755	Haplochromis_burtoni
ENSPKIG00000023494	snd1	98	81.465	ENSHGLG00000003618	SND1	96	84.433	Heterocephalus_glaber_female
ENSPKIG00000023494	snd1	99	80.744	ENSHGLG00100012449	SND1	99	80.989	Heterocephalus_glaber_male
ENSPKIG00000023494	snd1	99	85.823	ENSHCOG00000005266	snd1	98	86.394	Hippocampus_comes
ENSPKIG00000023494	snd1	100	86.834	ENSIPUG00000013279	snd1	98	87.791	Ictalurus_punctatus
ENSPKIG00000023494	snd1	98	81.798	ENSSTOG00000002140	SND1	99	81.477	Ictidomys_tridecemlineatus
ENSPKIG00000023494	snd1	98	81.798	ENSJJAG00000009561	Snd1	99	81.477	Jaculus_jaculus
ENSPKIG00000023494	snd1	99	86.587	ENSKMAG00000016997	snd1	99	86.842	Kryptolebias_marmoratus
ENSPKIG00000023494	snd1	99	89.185	ENSLBEG00000013563	snd1	98	86.726	Labrus_bergylta
ENSPKIG00000023494	snd1	98	88.177	ENSLOCG00000015537	snd1	100	87.826	Lepisosteus_oculatus
ENSPKIG00000023494	snd1	100	80.631	ENSLAFG00000009696	SND1	99	81.477	Loxodonta_africana
ENSPKIG00000023494	snd1	98	81.909	ENSMFAG00000038114	SND1	99	81.859	Macaca_fascicularis
ENSPKIG00000023494	snd1	98	81.909	ENSMMUG00000015432	SND1	99	81.588	Macaca_mulatta
ENSPKIG00000023494	snd1	98	81.909	ENSMNEG00000039808	SND1	97	85.366	Macaca_nemestrina
ENSPKIG00000023494	snd1	98	81.798	ENSMLEG00000029040	SND1	97	85.366	Mandrillus_leucophaeus
ENSPKIG00000023494	snd1	99	85.932	ENSMAMG00000011739	snd1	99	86.329	Mastacembelus_armatus
ENSPKIG00000023494	snd1	99	86.260	ENSMZEG00005005681	snd1	99	86.865	Maylandia_zebra
ENSPKIG00000023494	snd1	98	81.909	ENSMICG00000000097	SND1	99	81.588	Microcebus_murinus
ENSPKIG00000023494	snd1	98	81.687	ENSMOCG00000005040	Snd1	99	81.367	Microtus_ochrogaster
ENSPKIG00000023494	snd1	99	85.605	ENSMMOG00000001795	snd1	98	86.394	Mola_mola
ENSPKIG00000023494	snd1	98	81.576	ENSMODG00000015182	SND1	99	81.257	Monodelphis_domestica
ENSPKIG00000023494	snd1	99	86.587	ENSMALG00000012071	snd1	99	87.004	Monopterus_albus
ENSPKIG00000023494	snd1	98	81.354	MGP_CAROLIEiJ_G0028159	Snd1	97	84.068	Mus_caroli
ENSPKIG00000023494	snd1	98	81.132	ENSMUSG00000001424	Snd1	99	80.816	Mus_musculus
ENSPKIG00000023494	snd1	98	81.354	MGP_PahariEiJ_G0021917	Snd1	98	84.068	Mus_pahari
ENSPKIG00000023494	snd1	98	81.354	MGP_SPRETEiJ_G0029159	Snd1	99	81.036	Mus_spretus
ENSPKIG00000023494	snd1	100	80.740	ENSMPUG00000006545	SND1	98	81.798	Mustela_putorius_furo
ENSPKIG00000023494	snd1	97	80.552	ENSMLUG00000017130	SND1	99	80.552	Myotis_lucifugus
ENSPKIG00000023494	snd1	98	82.131	ENSNGAG00000011186	Snd1	99	81.808	Nannospalax_galili
ENSPKIG00000023494	snd1	99	86.260	ENSNBRG00000006681	snd1	99	86.865	Neolamprologus_brichardi
ENSPKIG00000023494	snd1	100	80.740	ENSNLEG00000012263	SND1	97	84.915	Nomascus_leucogenys
ENSPKIG00000023494	snd1	91	86.111	ENSOPRG00000013405	SND1	91	86.111	Ochotona_princeps
ENSPKIG00000023494	snd1	98	81.798	ENSODEG00000011502	SND1	99	81.319	Octodon_degus
ENSPKIG00000023494	snd1	99	86.369	ENSONIG00000011481	snd1	96	86.976	Oreochromis_niloticus
ENSPKIG00000023494	snd1	98	81.159	ENSOANG00000000817	SND1	98	81.159	Ornithorhynchus_anatinus
ENSPKIG00000023494	snd1	100	80.196	ENSOCUG00000001620	SND1	99	80.926	Oryctolagus_cuniculus
ENSPKIG00000023494	snd1	98	86.127	ENSORLG00000015201	snd1	99	85.793	Oryzias_latipes
ENSPKIG00000023494	snd1	98	86.349	ENSORLG00020013991	snd1	99	86.013	Oryzias_latipes_hni
ENSPKIG00000023494	snd1	98	86.349	ENSORLG00015012436	snd1	99	86.013	Oryzias_latipes_hsok
ENSPKIG00000023494	snd1	99	86.041	ENSOMEG00000006406	snd1	99	86.519	Oryzias_melastigma
ENSPKIG00000023494	snd1	98	81.838	ENSOGAG00000013356	SND1	93	81.518	Otolemur_garnettii
ENSPKIG00000023494	snd1	97	79.642	ENSOARG00000002149	SND1	100	79.642	Ovis_aries
ENSPKIG00000023494	snd1	98	81.909	ENSPPAG00000042947	SND1	99	81.859	Pan_paniscus
ENSPKIG00000023494	snd1	100	80.849	ENSPPRG00000004494	SND1	99	81.588	Panthera_pardus
ENSPKIG00000023494	snd1	100	80.740	ENSPTIG00000014214	SND1	99	81.477	Panthera_tigris_altaica
ENSPKIG00000023494	snd1	98	81.909	ENSPTRG00000023911	SND1	99	81.859	Pan_troglodytes
ENSPKIG00000023494	snd1	97	81.859	ENSPANG00000011997	SND1	99	81.859	Papio_anubis
ENSPKIG00000023494	snd1	92	85.884	ENSPMGG00000003629	snd1	100	85.884	Periophthalmus_magnuspinnatus
ENSPKIG00000023494	snd1	98	81.687	ENSPEMG00000010240	Snd1	99	81.367	Peromyscus_maniculatus_bairdii
ENSPKIG00000023494	snd1	97	73.236	ENSPMAG00000007915	-	99	73.236	Petromyzon_marinus
ENSPKIG00000023494	snd1	98	82.242	ENSPCIG00000011561	SND1	99	81.918	Phascolarctos_cinereus
ENSPKIG00000023494	snd1	99	85.605	ENSPFOG00000001557	snd1	99	86.218	Poecilia_formosa
ENSPKIG00000023494	snd1	99	85.823	ENSPLAG00000018459	snd1	96	86.439	Poecilia_latipinna
ENSPKIG00000023494	snd1	99	85.823	ENSPMEG00000006803	snd1	99	86.439	Poecilia_mexicana
ENSPKIG00000023494	snd1	99	85.823	ENSPREG00000002189	snd1	99	86.329	Poecilia_reticulata
ENSPKIG00000023494	snd1	91	86.111	ENSPPYG00000017972	SND1	99	86.111	Pongo_abelii
ENSPKIG00000023494	snd1	98	71.587	ENSPCAG00000011305	SND1	99	71.334	Procavia_capensis
ENSPKIG00000023494	snd1	98	81.798	ENSPCOG00000026791	SND1	100	81.767	Propithecus_coquereli
ENSPKIG00000023494	snd1	98	79.800	ENSPVAG00000013945	SND1	99	79.493	Pteropus_vampyrus
ENSPKIG00000023494	snd1	99	86.369	ENSPNYG00000000932	snd1	99	86.976	Pundamilia_nyererei
ENSPKIG00000023494	snd1	100	86.942	ENSPNAG00000001206	snd1	99	87.445	Pygocentrus_nattereri
ENSPKIG00000023494	snd1	98	81.465	ENSRNOG00000031173	Snd1	100	80.425	Rattus_norvegicus
ENSPKIG00000023494	snd1	71	85.952	ENSRBIG00000027782	-	93	85.981	Rhinopithecus_bieti
ENSPKIG00000023494	snd1	98	81.909	ENSRROG00000033020	SND1	99	81.588	Rhinopithecus_roxellana
ENSPKIG00000023494	snd1	98	81.687	ENSSBOG00000032461	SND1	99	81.635	Saimiri_boliviensis_boliviensis
ENSPKIG00000023494	snd1	98	78.930	ENSSHAG00000015359	SND1	100	78.930	Sarcophilus_harrisii
ENSPKIG00000023494	snd1	100	89.010	ENSSFOG00015001103	snd1	99	89.097	Scleropages_formosus
ENSPKIG00000023494	snd1	98	86.459	ENSSMAG00000001932	snd1	93	86.203	Scophthalmus_maximus
ENSPKIG00000023494	snd1	99	86.805	ENSSDUG00000002699	snd1	92	87.321	Seriola_dumerili
ENSPKIG00000023494	snd1	99	79.607	ENSSLDG00000001950	snd1	99	80.044	Seriola_lalandi_dorsalis
ENSPKIG00000023494	snd1	86	78.134	ENSSARG00000004877	SND1	92	78.134	Sorex_araneus
ENSPKIG00000023494	snd1	71	79.110	ENSSPUG00000017586	SND1	96	79.110	Sphenodon_punctatus
ENSPKIG00000023494	snd1	73	89.112	ENSSPAG00000021398	snd1	97	89.949	Stegastes_partitus
ENSPKIG00000023494	snd1	98	81.687	ENSSSCG00000016590	SND1	99	81.367	Sus_scrofa
ENSPKIG00000023494	snd1	99	84.733	ENSTRUG00000014067	snd1	99	85.226	Takifugu_rubripes
ENSPKIG00000023494	snd1	99	85.060	ENSTNIG00000011019	snd1	99	85.667	Tetraodon_nigroviridis
ENSPKIG00000023494	snd1	93	76.429	ENSTBEG00000003999	SND1	100	76.429	Tupaia_belangeri
ENSPKIG00000023494	snd1	98	77.802	ENSTTRG00000006059	SND1	99	77.508	Tursiops_truncatus
ENSPKIG00000023494	snd1	87	79.623	ENSUAMG00000005604	-	93	79.623	Ursus_americanus
ENSPKIG00000023494	snd1	67	75.130	ENSUAMG00000002820	-	87	76.738	Ursus_americanus
ENSPKIG00000023494	snd1	100	80.849	ENSUMAG00000005960	SND1	99	81.588	Ursus_maritimus
ENSPKIG00000023494	snd1	73	86.111	ENSVPAG00000008302	SND1	74	86.111	Vicugna_pacos
ENSPKIG00000023494	snd1	100	80.849	ENSVVUG00000007226	SND1	99	81.588	Vulpes_vulpes
ENSPKIG00000023494	snd1	97	77.964	ENSXETG00000023043	snd1	100	78.743	Xenopus_tropicalis
ENSPKIG00000023494	snd1	92	84.099	ENSXCOG00000013629	snd1	99	84.099	Xiphophorus_couchianus
ENSPKIG00000023494	snd1	99	86.260	ENSXMAG00000011469	snd1	99	86.770	Xiphophorus_maculatus