EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000023523 (Gene tree)
Gene ID: 111835127
Gene Symbol: sart1
Alias: -
Full Name: spliceosome associated factor 1%2C recruiter of U4/U6.U5 tri-snRNP
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 15078 bases
Position: chrPGUA01000503.1:187096-202173
Accession: 111835127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000007774	SART-1	PF03343.13	2.8e-144	1	1
ENSPKIP00000007801	SART-1	PF03343.13	3.2e-135	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000031841	-	7460	-	ENSPKIP00000007774	786 (aa)	XP_023650878	UPI000CD644E0
ENSPKIT00000031869	-	2295	-	ENSPKIP00000007801	764 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000023523's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000023523's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000023523	sart1	100	76.788	ENSAPOG00000017256	sart1	100	77.806	Acanthochromis_polyacanthus
ENSPKIG00000023523	sart1	100	77.020	ENSAOCG00000002873	sart1	100	77.525	Amphiprion_ocellaris
ENSPKIG00000023523	sart1	100	77.146	ENSAPEG00000002705	sart1	100	77.652	Amphiprion_percula
ENSPKIG00000023523	sart1	100	76.046	ENSATEG00000010608	sart1	100	74.282	Anabas_testudineus
ENSPKIG00000023523	sart1	100	78.145	ENSAMXG00000007275	sart1	100	78.653	Astyanax_mexicanus
ENSPKIG00000023523	sart1	100	75.508	ENSCSEG00000001968	sart1	100	76.015	Cynoglossus_semilaevis
ENSPKIG00000023523	sart1	92	76.552	ENSDARG00000005945	sart1	100	76.523	Danio_rerio
ENSPKIG00000023523	sart1	100	77.708	ENSELUG00000015791	sart1	100	77.456	Esox_lucius
ENSPKIG00000023523	sart1	100	77.567	ENSMAMG00000012486	sart1	100	78.074	Mastacembelus_armatus
ENSPKIG00000023523	sart1	100	76.679	ENSMALG00000018262	sart1	100	76.709	Monopterus_albus
ENSPKIG00000023523	sart1	100	76.806	ENSPNAG00000002187	sart1	100	77.440	Pygocentrus_nattereri