EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000023538 (Gene tree)
Gene ID: 111851887
Gene Symbol: CNOT1 (1 of many)
Alias: -
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 22525 bases
Position: chrPGUA01000024.1:342912-365436
Accession: 111851887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000007960	Not1	PF04054.15	4.5e-153	1	1
ENSPKIP00000007911	Not1	PF04054.15	4.8e-153	1	1
ENSPKIP00000007857	Not1	PF04054.15	4.8e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000031925	CNOT1 (1 of many)-201	7765	XM_023827209	ENSPKIP00000007857	2373 (aa)	XP_023682977	UPI000CD61014
ENSPKIT00000031981	CNOT1 (1 of many)-202	7044	-	ENSPKIP00000007911	2347 (aa)	-	-
ENSPKIT00000032031	CNOT1 (1 of many)-203	6954	-	ENSPKIP00000007960	2317 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000023538's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000023538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000023538	CNOT1	97	94.803	ENSPKIG00000002914	CNOT1	100	94.670

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000023538	CNOT1	100	92.515	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSPKIG00000023538	CNOT1	97	98.317	ENSAPOG00000005042	cnot1	100	98.317	Acanthochromis_polyacanthus
ENSPKIG00000023538	CNOT1	100	92.557	ENSAMEG00000017298	CNOT1	100	92.389	Ailuropoda_melanoleuca
ENSPKIG00000023538	CNOT1	90	93.476	ENSACIG00000016003	cnot1	100	93.336	Amphilophus_citrinellus
ENSPKIG00000023538	CNOT1	100	95.159	ENSAPEG00000022342	cnot1	100	95.287	Amphiprion_percula
ENSPKIG00000023538	CNOT1	97	98.457	ENSATEG00000012892	cnot1	100	98.457	Anabas_testudineus
ENSPKIG00000023538	CNOT1	100	91.831	ENSAPLG00000007162	CNOT1	100	91.831	Anas_platyrhynchos
ENSPKIG00000023538	CNOT1	91	90.707	ENSACAG00000001602	CNOT1	98	90.522	Anolis_carolinensis
ENSPKIG00000023538	CNOT1	100	89.474	ENSANAG00000038198	CNOT1	100	89.307	Aotus_nancymaae
ENSPKIG00000023538	CNOT1	97	98.457	ENSACLG00000014234	cnot1	100	98.457	Astatotilapia_calliptera
ENSPKIG00000023538	CNOT1	100	94.402	ENSAMXG00000013170	cnot1	100	94.741	Astyanax_mexicanus
ENSPKIG00000023538	CNOT1	100	92.321	ENSBTAG00000020782	CNOT1	100	96.607	Bos_taurus
ENSPKIG00000023538	CNOT1	82	40.896	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSPKIG00000023538	CNOT1	100	92.195	ENSCJAG00000011318	CNOT1	100	92.545	Callithrix_jacchus
ENSPKIG00000023538	CNOT1	100	91.918	ENSCAFG00000008426	CNOT1	100	91.750	Canis_familiaris
ENSPKIG00000023538	CNOT1	100	92.189	ENSCAFG00020010156	CNOT1	100	93.439	Canis_lupus_dingo
ENSPKIG00000023538	CNOT1	100	92.321	ENSCHIG00000010452	CNOT1	100	92.153	Capra_hircus
ENSPKIG00000023538	CNOT1	100	92.321	ENSTSYG00000006888	CNOT1	100	92.153	Carlito_syrichta
ENSPKIG00000023538	CNOT1	100	88.586	ENSCPOG00000013026	CNOT1	100	88.418	Cavia_porcellus
ENSPKIG00000023538	CNOT1	100	90.684	ENSCCAG00000026333	CNOT1	100	90.516	Cebus_capucinus
ENSPKIG00000023538	CNOT1	100	92.279	ENSCATG00000032625	CNOT1	100	92.111	Cercocebus_atys
ENSPKIG00000023538	CNOT1	100	92.405	ENSCLAG00000006289	CNOT1	100	92.237	Chinchilla_lanigera
ENSPKIG00000023538	CNOT1	100	92.279	ENSCSAG00000004731	CNOT1	100	92.111	Chlorocebus_sabaeus
ENSPKIG00000023538	CNOT1	80	97.880	ENSCHOG00000009712	CNOT1	83	97.880	Choloepus_hoffmanni
ENSPKIG00000023538	CNOT1	94	96.040	ENSCPBG00000026222	CNOT1	98	96.040	Chrysemys_picta_bellii
ENSPKIG00000023538	CNOT1	100	58.724	ENSCING00000009149	-	100	58.544	Ciona_intestinalis
ENSPKIG00000023538	CNOT1	89	63.025	ENSCSAVG00000002414	-	95	79.470	Ciona_savignyi
ENSPKIG00000023538	CNOT1	100	90.337	ENSCANG00000040534	CNOT1	100	90.171	Colobus_angolensis_palliatus
ENSPKIG00000023538	CNOT1	100	91.985	ENSCGRG00001016365	Cnot1	100	92.027	Cricetulus_griseus_chok1gshd
ENSPKIG00000023538	CNOT1	100	91.985	ENSCGRG00000001714	Cnot1	100	92.027	Cricetulus_griseus_crigri
ENSPKIG00000023538	CNOT1	100	88.726	ENSCVAG00000018930	cnot1	100	88.684	Cyprinodon_variegatus
ENSPKIG00000023538	CNOT1	100	93.905	ENSDARG00000004174	cnot1	100	94.620	Danio_rerio
ENSPKIG00000023538	CNOT1	100	90.017	ENSDNOG00000013250	CNOT1	100	89.849	Dasypus_novemcinctus
ENSPKIG00000023538	CNOT1	99	46.041	FBgn0085436	Not1	99	48.135	Drosophila_melanogaster
ENSPKIG00000023538	CNOT1	84	94.578	ENSETEG00000012806	CNOT1	84	94.578	Echinops_telfairi
ENSPKIG00000023538	CNOT1	81	76.383	ENSEBUG00000011534	cnot1	95	76.383	Eptatretus_burgeri
ENSPKIG00000023538	CNOT1	96	96.223	ENSEASG00005005819	CNOT1	100	96.607	Equus_asinus_asinus
ENSPKIG00000023538	CNOT1	100	92.279	ENSECAG00000009889	CNOT1	100	92.111	Equus_caballus
ENSPKIG00000023538	CNOT1	89	91.458	ENSEEUG00000006015	CNOT1	90	91.458	Erinaceus_europaeus
ENSPKIG00000023538	CNOT1	100	94.413	ENSELUG00000014085	cnot1	100	94.456	Esox_lucius
ENSPKIG00000023538	CNOT1	100	92.050	ENSFCAG00000025155	CNOT1	100	91.883	Felis_catus
ENSPKIG00000023538	CNOT1	100	91.901	ENSFALG00000007285	CNOT1	100	91.901	Ficedula_albicollis
ENSPKIG00000023538	CNOT1	100	92.363	ENSFDAG00000013399	CNOT1	100	92.195	Fukomys_damarensis
ENSPKIG00000023538	CNOT1	100	92.701	ENSFHEG00000020574	cnot1	100	93.004	Fundulus_heteroclitus
ENSPKIG00000023538	CNOT1	91	93.878	ENSGMOG00000012864	cnot1	100	94.017	Gadus_morhua
ENSPKIG00000023538	CNOT1	100	91.817	ENSGALG00000002301	CNOT1	100	91.817	Gallus_gallus
ENSPKIG00000023538	CNOT1	100	93.913	ENSGAFG00000015005	cnot1	100	93.871	Gambusia_affinis
ENSPKIG00000023538	CNOT1	91	94.115	ENSGACG00000002606	cnot1	100	97.697	Gasterosteus_aculeatus
ENSPKIG00000023538	CNOT1	100	91.737	ENSGAGG00000022646	CNOT1	100	92.308	Gopherus_agassizii
ENSPKIG00000023538	CNOT1	100	92.321	ENSGGOG00000009547	CNOT1	100	92.153	Gorilla_gorilla
ENSPKIG00000023538	CNOT1	97	98.457	ENSHBUG00000001729	cnot1	100	98.457	Haplochromis_burtoni
ENSPKIG00000023538	CNOT1	100	92.279	ENSHGLG00000014322	CNOT1	100	92.111	Heterocephalus_glaber_female
ENSPKIG00000023538	CNOT1	100	93.294	ENSHCOG00000006501	cnot1	100	93.378	Hippocampus_comes
ENSPKIG00000023538	CNOT1	100	93.662	ENSIPUG00000011915	cnot1	100	94.218	Ictalurus_punctatus
ENSPKIG00000023538	CNOT1	100	92.237	ENSSTOG00000005490	CNOT1	100	92.069	Ictidomys_tridecemlineatus
ENSPKIG00000023538	CNOT1	100	91.733	ENSJJAG00000000633	Cnot1	100	91.565	Jaculus_jaculus
ENSPKIG00000023538	CNOT1	100	93.580	ENSKMAG00000006149	cnot1	100	93.663	Kryptolebias_marmoratus
ENSPKIG00000023538	CNOT1	96	97.614	ENSLBEG00000004740	cnot1	100	98.004	Labrus_bergylta
ENSPKIG00000023538	CNOT1	100	92.446	ENSLACG00000010869	CNOT1	100	92.530	Latimeria_chalumnae
ENSPKIG00000023538	CNOT1	100	96.299	ENSLOCG00000006324	cnot1	100	96.299	Lepisosteus_oculatus
ENSPKIG00000023538	CNOT1	100	92.159	ENSLAFG00000000098	CNOT1	100	91.992	Loxodonta_africana
ENSPKIG00000023538	CNOT1	100	92.515	ENSMFAG00000035888	CNOT1	100	92.347	Macaca_fascicularis
ENSPKIG00000023538	CNOT1	100	92.237	ENSMMUG00000014625	CNOT1	94	98.545	Macaca_mulatta
ENSPKIG00000023538	CNOT1	100	89.833	ENSMNEG00000031820	CNOT1	100	91.760	Macaca_nemestrina
ENSPKIG00000023538	CNOT1	100	90.921	ENSMLEG00000040933	CNOT1	100	90.753	Mandrillus_leucophaeus
ENSPKIG00000023538	CNOT1	100	93.959	ENSMAMG00000016524	cnot1	100	93.916	Mastacembelus_armatus
ENSPKIG00000023538	CNOT1	97	98.457	ENSMZEG00005016210	cnot1	100	98.457	Maylandia_zebra
ENSPKIG00000023538	CNOT1	100	92.052	ENSMGAG00000001908	CNOT1	100	92.052	Meleagris_gallopavo
ENSPKIG00000023538	CNOT1	100	91.978	ENSMICG00000007071	CNOT1	100	92.107	Microcebus_murinus
ENSPKIG00000023538	CNOT1	100	92.195	ENSMOCG00000017969	Cnot1	100	92.027	Microtus_ochrogaster
ENSPKIG00000023538	CNOT1	97	95.091	ENSMMOG00000019134	cnot1	100	95.091	Mola_mola
ENSPKIG00000023538	CNOT1	100	92.114	ENSMODG00000014199	CNOT1	100	91.946	Monodelphis_domestica
ENSPKIG00000023538	CNOT1	100	95.028	ENSMALG00000008645	cnot1	100	94.985	Monopterus_albus
ENSPKIG00000023538	CNOT1	95	98.095	MGP_CAROLIEiJ_G0031430	Cnot1	92	98.095	Mus_caroli
ENSPKIG00000023538	CNOT1	100	92.347	ENSMUSG00000036550	Cnot1	100	92.178	Mus_musculus
ENSPKIG00000023538	CNOT1	100	92.237	MGP_PahariEiJ_G0023028	Cnot1	100	92.069	Mus_pahari
ENSPKIG00000023538	CNOT1	100	92.195	MGP_SPRETEiJ_G0032549	Cnot1	100	92.027	Mus_spretus
ENSPKIG00000023538	CNOT1	100	92.321	ENSMPUG00000004830	CNOT1	100	92.153	Mustela_putorius_furo
ENSPKIG00000023538	CNOT1	100	92.069	ENSMLUG00000003728	CNOT1	100	91.901	Myotis_lucifugus
ENSPKIG00000023538	CNOT1	100	92.237	ENSNGAG00000018628	Cnot1	100	92.069	Nannospalax_galili
ENSPKIG00000023538	CNOT1	94	98.457	ENSNBRG00000019358	cnot1	100	98.457	Neolamprologus_brichardi
ENSPKIG00000023538	CNOT1	100	92.275	ENSNLEG00000003566	CNOT1	100	92.107	Nomascus_leucogenys
ENSPKIG00000023538	CNOT1	87	95.349	ENSMEUG00000006145	CNOT1	88	94.444	Notamacropus_eugenii
ENSPKIG00000023538	CNOT1	86	99.029	ENSOPRG00000005604	CNOT1	86	99.029	Ochotona_princeps
ENSPKIG00000023538	CNOT1	100	92.321	ENSODEG00000016337	CNOT1	100	92.153	Octodon_degus
ENSPKIG00000023538	CNOT1	100	93.994	ENSONIG00000007358	cnot1	100	94.204	Oreochromis_niloticus
ENSPKIG00000023538	CNOT1	91	91.686	ENSOANG00000012109	CNOT1	100	91.612	Ornithorhynchus_anatinus
ENSPKIG00000023538	CNOT1	100	92.321	ENSOCUG00000006911	CNOT1	100	92.153	Oryctolagus_cuniculus
ENSPKIG00000023538	CNOT1	100	93.076	ENSORLG00000013734	cnot1	100	93.328	Oryzias_latipes
ENSPKIG00000023538	CNOT1	100	91.383	ENSORLG00020017012	cnot1	100	91.635	Oryzias_latipes_hni
ENSPKIG00000023538	CNOT1	100	91.299	ENSORLG00015007091	cnot1	100	91.383	Oryzias_latipes_hsok
ENSPKIG00000023538	CNOT1	100	90.894	ENSOMEG00000015124	cnot1	100	91.230	Oryzias_melastigma
ENSPKIG00000023538	CNOT1	100	92.237	ENSOGAG00000000543	CNOT1	100	92.069	Otolemur_garnettii
ENSPKIG00000023538	CNOT1	100	92.321	ENSOARG00000001567	CNOT1	100	92.153	Ovis_aries
ENSPKIG00000023538	CNOT1	100	92.279	ENSPPAG00000022013	CNOT1	100	92.111	Pan_paniscus
ENSPKIG00000023538	CNOT1	100	92.321	ENSPPRG00000004867	CNOT1	100	92.153	Panthera_pardus
ENSPKIG00000023538	CNOT1	100	92.321	ENSPTIG00000012589	CNOT1	100	92.153	Panthera_tigris_altaica
ENSPKIG00000023538	CNOT1	100	92.008	ENSPTRG00000008183	CNOT1	100	91.841	Pan_troglodytes
ENSPKIG00000023538	CNOT1	100	89.089	ENSPANG00000020901	CNOT1	100	88.921	Papio_anubis
ENSPKIG00000023538	CNOT1	100	91.943	ENSPSIG00000005499	CNOT1	100	91.943	Pelodiscus_sinensis
ENSPKIG00000023538	CNOT1	100	80.126	ENSPMAG00000009381	cnot1	100	80.025	Petromyzon_marinus
ENSPKIG00000023538	CNOT1	100	92.876	ENSPCIG00000007343	CNOT1	100	96.806	Phascolarctos_cinereus
ENSPKIG00000023538	CNOT1	99	93.263	ENSPFOG00000003497	cnot1	100	93.220	Poecilia_formosa
ENSPKIG00000023538	CNOT1	96	97.217	ENSPLAG00000014018	cnot1	100	97.605	Poecilia_latipinna
ENSPKIG00000023538	CNOT1	96	97.605	ENSPMEG00000005868	cnot1	100	97.605	Poecilia_mexicana
ENSPKIG00000023538	CNOT1	96	97.217	ENSPREG00000018793	cnot1	100	97.605	Poecilia_reticulata
ENSPKIG00000023538	CNOT1	100	92.321	ENSPPYG00000007410	CNOT1	100	92.153	Pongo_abelii
ENSPKIG00000023538	CNOT1	88	91.489	ENSPCAG00000003241	CNOT1	88	91.489	Procavia_capensis
ENSPKIG00000023538	CNOT1	100	91.667	ENSPCOG00000027139	CNOT1	100	91.796	Propithecus_coquereli
ENSPKIG00000023538	CNOT1	100	89.593	ENSPVAG00000004243	CNOT1	100	89.677	Pteropus_vampyrus
ENSPKIG00000023538	CNOT1	97	98.457	ENSPNYG00000012919	cnot1	100	98.457	Pundamilia_nyererei
ENSPKIG00000023538	CNOT1	100	94.504	ENSPNAG00000000246	cnot1	100	95.105	Pygocentrus_nattereri
ENSPKIG00000023538	CNOT1	100	92.195	ENSRNOG00000012271	Cnot1	100	92.027	Rattus_norvegicus
ENSPKIG00000023538	CNOT1	100	90.042	ENSRBIG00000044598	CNOT1	100	89.874	Rhinopithecus_bieti
ENSPKIG00000023538	CNOT1	100	92.279	ENSRROG00000000906	CNOT1	100	92.111	Rhinopithecus_roxellana
ENSPKIG00000023538	CNOT1	58	30.753	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSPKIG00000023538	CNOT1	100	88.063	ENSSBOG00000029155	CNOT1	100	87.896	Saimiri_boliviensis_boliviensis
ENSPKIG00000023538	CNOT1	100	92.117	ENSSHAG00000012187	CNOT1	100	91.908	Sarcophilus_harrisii
ENSPKIG00000023538	CNOT1	100	94.426	ENSSFOG00015017614	cnot1	100	94.426	Scleropages_formosus
ENSPKIG00000023538	CNOT1	97	98.457	ENSSMAG00000013844	cnot1	100	98.457	Scophthalmus_maximus
ENSPKIG00000023538	CNOT1	97	98.317	ENSSDUG00000021491	cnot1	100	98.317	Seriola_dumerili
ENSPKIG00000023538	CNOT1	97	98.317	ENSSLDG00000014816	cnot1	100	98.317	Seriola_lalandi_dorsalis
ENSPKIG00000023538	CNOT1	84	97.600	ENSSARG00000000762	CNOT1	88	97.600	Sorex_araneus
ENSPKIG00000023538	CNOT1	100	95.332	ENSSPAG00000018802	cnot1	100	95.246	Stegastes_partitus
ENSPKIG00000023538	CNOT1	100	92.869	ENSSSCG00000002799	CNOT1	100	96.607	Sus_scrofa
ENSPKIG00000023538	CNOT1	100	91.911	ENSTGUG00000005919	CNOT1	100	91.911	Taeniopygia_guttata
ENSPKIG00000023538	CNOT1	100	92.346	ENSTNIG00000018706	cnot1	100	92.430	Tetraodon_nigroviridis
ENSPKIG00000023538	CNOT1	82	97.887	ENSTBEG00000000720	CNOT1	80	97.887	Tupaia_belangeri
ENSPKIG00000023538	CNOT1	95	91.352	ENSTTRG00000008460	CNOT1	95	91.120	Tursiops_truncatus
ENSPKIG00000023538	CNOT1	100	92.321	ENSUAMG00000009251	CNOT1	100	92.153	Ursus_americanus
ENSPKIG00000023538	CNOT1	100	92.321	ENSUMAG00000021291	CNOT1	100	92.153	Ursus_maritimus
ENSPKIG00000023538	CNOT1	97	92.308	ENSVPAG00000008846	CNOT1	97	92.308	Vicugna_pacos
ENSPKIG00000023538	CNOT1	100	92.189	ENSVVUG00000024037	CNOT1	100	93.439	Vulpes_vulpes
ENSPKIG00000023538	CNOT1	100	85.900	ENSXETG00000015900	cnot1	100	86.404	Xenopus_tropicalis
ENSPKIG00000023538	CNOT1	100	94.042	ENSXCOG00000013552	cnot1	100	93.999	Xiphophorus_couchianus
ENSPKIG00000023538	CNOT1	100	94.085	ENSXMAG00000006031	cnot1	100	94.042	Xiphophorus_maculatus