EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000023648 (Gene tree)
Gene ID: 111846511
Gene Symbol: cstf3
Alias: -
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 14006 bases
Position: chrPGUA01000011.1:1025569-1039574
Accession: 111846511
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000007957	Suf	PF05843.14	1.3e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000032028	-	2151	-	ENSPKIP00000007957	716 (aa)	XP_023672532	UPI000CD6082D

Gene Model

Click here to download ENSPKIG00000023648's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000023648's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000023648	cstf3	100	92.469	ENSG00000176102	CSTF3	100	92.469	Homo_sapiens
ENSPKIG00000023648	cstf3	100	93.863	ENSAPOG00000014054	cstf3	100	93.863	Acanthochromis_polyacanthus
ENSPKIG00000023648	cstf3	99	92.556	ENSAMEG00000007187	CSTF3	99	92.556	Ailuropoda_melanoleuca
ENSPKIG00000023648	cstf3	87	88.462	ENSACIG00000005539	cstf3	100	88.462	Amphilophus_citrinellus
ENSPKIG00000023648	cstf3	100	93.863	ENSAOCG00000010930	cstf3	100	93.863	Amphiprion_ocellaris
ENSPKIG00000023648	cstf3	100	93.863	ENSAPEG00000007903	cstf3	100	93.863	Amphiprion_percula
ENSPKIG00000023648	cstf3	100	93.724	ENSATEG00000000190	cstf3	100	93.724	Anabas_testudineus
ENSPKIG00000023648	cstf3	99	92.373	ENSAPLG00000007217	CSTF3	100	92.373	Anas_platyrhynchos
ENSPKIG00000023648	cstf3	100	91.643	ENSACAG00000002823	CSTF3	100	91.643	Anolis_carolinensis
ENSPKIG00000023648	cstf3	100	92.469	ENSANAG00000020699	CSTF3	100	92.469	Aotus_nancymaae
ENSPKIG00000023648	cstf3	98	94.318	ENSACLG00000007820	cstf3	100	93.724	Astatotilapia_calliptera
ENSPKIG00000023648	cstf3	100	92.329	ENSAMXG00000014198	cstf3	100	92.608	Astyanax_mexicanus
ENSPKIG00000023648	cstf3	100	92.469	ENSBTAG00000008617	CSTF3	100	92.730	Bos_taurus
ENSPKIG00000023648	cstf3	97	48.290	WBGene00006307	suf-1	99	48.290	Caenorhabditis_elegans
ENSPKIG00000023648	cstf3	100	92.469	ENSCJAG00000005533	CSTF3	100	92.469	Callithrix_jacchus
ENSPKIG00000023648	cstf3	100	92.469	ENSCAFG00000007264	CSTF3	100	92.469	Canis_familiaris
ENSPKIG00000023648	cstf3	99	92.948	ENSCAFG00020002715	CSTF3	99	92.948	Canis_lupus_dingo
ENSPKIG00000023648	cstf3	98	91.465	ENSCHIG00000016418	CSTF3	100	92.160	Capra_hircus
ENSPKIG00000023648	cstf3	99	93.089	ENSTSYG00000000451	CSTF3	99	96.239	Carlito_syrichta
ENSPKIG00000023648	cstf3	83	88.180	ENSCAPG00000010958	CSTF3	98	88.180	Cavia_aperea
ENSPKIG00000023648	cstf3	100	92.329	ENSCPOG00000005545	CSTF3	100	92.329	Cavia_porcellus
ENSPKIG00000023648	cstf3	100	92.469	ENSCCAG00000024790	CSTF3	100	92.469	Cebus_capucinus
ENSPKIG00000023648	cstf3	100	92.469	ENSCATG00000007080	CSTF3	100	92.469	Cercocebus_atys
ENSPKIG00000023648	cstf3	100	92.469	ENSCLAG00000016179	CSTF3	100	92.469	Chinchilla_lanigera
ENSPKIG00000023648	cstf3	78	98.120	ENSCHOG00000002497	CSTF3	79	98.120	Choloepus_hoffmanni
ENSPKIG00000023648	cstf3	100	91.783	ENSCPBG00000006753	CSTF3	100	91.783	Chrysemys_picta_bellii
ENSPKIG00000023648	cstf3	99	62.064	ENSCING00000006401	-	98	62.064	Ciona_intestinalis
ENSPKIG00000023648	cstf3	98	61.290	ENSCSAVG00000004851	-	100	61.290	Ciona_savignyi
ENSPKIG00000023648	cstf3	100	92.469	ENSCANG00000035468	CSTF3	100	92.469	Colobus_angolensis_palliatus
ENSPKIG00000023648	cstf3	100	92.190	ENSCGRG00001014773	Cstf3	100	92.190	Cricetulus_griseus_chok1gshd
ENSPKIG00000023648	cstf3	100	92.190	ENSCGRG00000004142	Cstf3	100	92.190	Cricetulus_griseus_crigri
ENSPKIG00000023648	cstf3	100	93.296	ENSCSEG00000014283	cstf3	100	93.296	Cynoglossus_semilaevis
ENSPKIG00000023648	cstf3	100	93.026	ENSCVAG00000019739	cstf3	100	93.026	Cyprinodon_variegatus
ENSPKIG00000023648	cstf3	100	93.715	ENSDARG00000018904	cstf3	100	93.715	Danio_rerio
ENSPKIG00000023648	cstf3	99	92.297	ENSDNOG00000007366	CSTF3	99	92.297	Dasypus_novemcinctus
ENSPKIG00000023648	cstf3	99	85.331	ENSDORG00000005898	Cstf3	99	85.331	Dipodomys_ordii
ENSPKIG00000023648	cstf3	98	57.302	FBgn0003559	su(f)	98	57.302	Drosophila_melanogaster
ENSPKIG00000023648	cstf3	90	86.916	ENSETEG00000017097	CSTF3	90	86.916	Echinops_telfairi
ENSPKIG00000023648	cstf3	84	73.798	ENSEBUG00000015459	cstf3	96	73.798	Eptatretus_burgeri
ENSPKIG00000023648	cstf3	98	93.143	ENSEASG00005019884	CSTF3	97	96.667	Equus_asinus_asinus
ENSPKIG00000023648	cstf3	98	93.143	ENSECAG00000023338	CSTF3	97	96.667	Equus_caballus
ENSPKIG00000023648	cstf3	100	87.308	ENSEEUG00000015167	CSTF3	100	87.308	Erinaceus_europaeus
ENSPKIG00000023648	cstf3	100	92.469	ENSELUG00000023393	cstf3	100	92.469	Esox_lucius
ENSPKIG00000023648	cstf3	100	92.469	ENSFCAG00000030711	CSTF3	100	92.469	Felis_catus
ENSPKIG00000023648	cstf3	93	93.994	ENSFALG00000010764	CSTF3	100	91.398	Ficedula_albicollis
ENSPKIG00000023648	cstf3	100	92.469	ENSFDAG00000012082	CSTF3	100	92.469	Fukomys_damarensis
ENSPKIG00000023648	cstf3	100	93.166	ENSFHEG00000020623	cstf3	100	93.166	Fundulus_heteroclitus
ENSPKIG00000023648	cstf3	100	92.201	ENSGMOG00000012275	cstf3	100	92.201	Gadus_morhua
ENSPKIG00000023648	cstf3	100	92.061	ENSGALG00000011685	CSTF3	100	92.061	Gallus_gallus
ENSPKIG00000023648	cstf3	100	93.584	ENSGAFG00000002181	cstf3	100	93.584	Gambusia_affinis
ENSPKIG00000023648	cstf3	100	93.584	ENSGACG00000015997	cstf3	100	93.584	Gasterosteus_aculeatus
ENSPKIG00000023648	cstf3	100	91.922	ENSGAGG00000006200	CSTF3	100	91.922	Gopherus_agassizii
ENSPKIG00000023648	cstf3	99	87.165	ENSGGOG00000026591	CSTF3	96	91.556	Gorilla_gorilla
ENSPKIG00000023648	cstf3	98	94.318	ENSHBUG00000016656	cstf3	100	93.724	Haplochromis_burtoni
ENSPKIG00000023648	cstf3	100	92.190	ENSHGLG00000017834	CSTF3	100	92.190	Heterocephalus_glaber_female
ENSPKIG00000023648	cstf3	100	92.190	ENSHGLG00100018042	CSTF3	100	92.190	Heterocephalus_glaber_male
ENSPKIG00000023648	cstf3	98	91.915	ENSHCOG00000015218	cstf3	100	91.074	Hippocampus_comes
ENSPKIG00000023648	cstf3	100	92.598	ENSIPUG00000013170	CSTF3	100	92.598	Ictalurus_punctatus
ENSPKIG00000023648	cstf3	100	92.469	ENSSTOG00000013306	CSTF3	100	92.469	Ictidomys_tridecemlineatus
ENSPKIG00000023648	cstf3	99	82.022	ENSJJAG00000018430	Cstf3	99	82.022	Jaculus_jaculus
ENSPKIG00000023648	cstf3	100	92.329	ENSKMAG00000010916	cstf3	100	92.329	Kryptolebias_marmoratus
ENSPKIG00000023648	cstf3	100	93.445	ENSLBEG00000002306	cstf3	100	93.445	Labrus_bergylta
ENSPKIG00000023648	cstf3	100	91.620	ENSLACG00000017296	CSTF3	100	91.620	Latimeria_chalumnae
ENSPKIG00000023648	cstf3	100	95.258	ENSLOCG00000004415	cstf3	100	95.258	Lepisosteus_oculatus
ENSPKIG00000023648	cstf3	100	92.050	ENSLAFG00000008712	CSTF3	100	92.050	Loxodonta_africana
ENSPKIG00000023648	cstf3	100	92.469	ENSMFAG00000029516	CSTF3	100	92.469	Macaca_fascicularis
ENSPKIG00000023648	cstf3	100	92.469	ENSMMUG00000002542	CSTF3	100	92.469	Macaca_mulatta
ENSPKIG00000023648	cstf3	100	92.469	ENSMNEG00000021807	CSTF3	100	92.469	Macaca_nemestrina
ENSPKIG00000023648	cstf3	100	92.469	ENSMLEG00000039594	CSTF3	100	92.469	Mandrillus_leucophaeus
ENSPKIG00000023648	cstf3	100	94.282	ENSMAMG00000020423	cstf3	100	94.282	Mastacembelus_armatus
ENSPKIG00000023648	cstf3	98	94.318	ENSMZEG00005012082	cstf3	100	93.724	Maylandia_zebra
ENSPKIG00000023648	cstf3	100	91.922	ENSMGAG00000001383	CSTF3	100	91.922	Meleagris_gallopavo
ENSPKIG00000023648	cstf3	100	92.329	ENSMAUG00000002487	Cstf3	100	92.329	Mesocricetus_auratus
ENSPKIG00000023648	cstf3	100	92.190	ENSMICG00000004784	CSTF3	100	92.190	Microcebus_murinus
ENSPKIG00000023648	cstf3	100	92.190	ENSMOCG00000017583	Cstf3	100	92.190	Microtus_ochrogaster
ENSPKIG00000023648	cstf3	99	93.935	ENSMMOG00000016026	cstf3	95	93.935	Mola_mola
ENSPKIG00000023648	cstf3	100	81.450	ENSMODG00000025205	-	100	81.450	Monodelphis_domestica
ENSPKIG00000023648	cstf3	100	91.771	ENSMODG00000009745	-	100	91.771	Monodelphis_domestica
ENSPKIG00000023648	cstf3	100	93.724	ENSMALG00000012050	cstf3	100	93.724	Monopterus_albus
ENSPKIG00000023648	cstf3	100	92.190	MGP_CAROLIEiJ_G0024026	Cstf3	100	92.190	Mus_caroli
ENSPKIG00000023648	cstf3	100	92.190	ENSMUSG00000027176	Cstf3	100	92.190	Mus_musculus
ENSPKIG00000023648	cstf3	100	92.190	MGP_PahariEiJ_G0025464	Cstf3	100	92.190	Mus_pahari
ENSPKIG00000023648	cstf3	100	92.190	MGP_SPRETEiJ_G0024939	Cstf3	100	92.190	Mus_spretus
ENSPKIG00000023648	cstf3	100	92.329	ENSMPUG00000011457	CSTF3	100	92.329	Mustela_putorius_furo
ENSPKIG00000023648	cstf3	100	89.679	ENSMLUG00000026022	-	100	89.679	Myotis_lucifugus
ENSPKIG00000023648	cstf3	99	92.546	ENSMLUG00000003073	-	99	92.546	Myotis_lucifugus
ENSPKIG00000023648	cstf3	100	92.190	ENSNGAG00000010677	Cstf3	100	92.190	Nannospalax_galili
ENSPKIG00000023648	cstf3	87	93.750	ENSNBRG00000007345	cstf3	100	93.750	Neolamprologus_brichardi
ENSPKIG00000023648	cstf3	100	92.469	ENSNLEG00000017901	CSTF3	100	92.469	Nomascus_leucogenys
ENSPKIG00000023648	cstf3	73	90.249	ENSMEUG00000005640	-	100	90.249	Notamacropus_eugenii
ENSPKIG00000023648	cstf3	67	92.000	ENSOPRG00000000199	-	67	92.000	Ochotona_princeps
ENSPKIG00000023648	cstf3	89	80.189	ENSODEG00000006311	-	97	80.189	Octodon_degus
ENSPKIG00000023648	cstf3	100	92.329	ENSODEG00000016737	-	100	92.329	Octodon_degus
ENSPKIG00000023648	cstf3	98	94.318	ENSONIG00000005563	cstf3	100	93.724	Oreochromis_niloticus
ENSPKIG00000023648	cstf3	90	90.769	ENSOANG00000015140	CSTF3	100	90.769	Ornithorhynchus_anatinus
ENSPKIG00000023648	cstf3	100	92.190	ENSOCUG00000015417	CSTF3	100	92.190	Oryctolagus_cuniculus
ENSPKIG00000023648	cstf3	100	92.318	ENSORLG00000009762	cstf3	100	92.318	Oryzias_latipes
ENSPKIG00000023648	cstf3	100	92.318	ENSORLG00020005540	cstf3	100	92.318	Oryzias_latipes_hni
ENSPKIG00000023648	cstf3	100	92.179	ENSORLG00015003551	cstf3	100	92.179	Oryzias_latipes_hsok
ENSPKIG00000023648	cstf3	100	91.620	ENSOMEG00000003848	cstf3	100	91.620	Oryzias_melastigma
ENSPKIG00000023648	cstf3	100	91.944	ENSOGAG00000010229	CSTF3	100	91.944	Otolemur_garnettii
ENSPKIG00000023648	cstf3	90	92.224	ENSOARG00000017271	CSTF3	99	92.224	Ovis_aries
ENSPKIG00000023648	cstf3	99	89.563	ENSPPAG00000027358	CSTF3	99	89.563	Pan_paniscus
ENSPKIG00000023648	cstf3	100	92.469	ENSPPRG00000016852	CSTF3	100	92.469	Panthera_pardus
ENSPKIG00000023648	cstf3	100	92.469	ENSPTIG00000008716	CSTF3	100	92.469	Panthera_tigris_altaica
ENSPKIG00000023648	cstf3	100	92.469	ENSPTRG00000003485	CSTF3	100	92.469	Pan_troglodytes
ENSPKIG00000023648	cstf3	100	92.469	ENSPANG00000013722	CSTF3	100	92.469	Papio_anubis
ENSPKIG00000023648	cstf3	100	91.922	ENSPSIG00000009173	CSTF3	100	91.922	Pelodiscus_sinensis
ENSPKIG00000023648	cstf3	76	95.795	ENSPMGG00000000164	cstf3	99	95.795	Periophthalmus_magnuspinnatus
ENSPKIG00000023648	cstf3	100	92.050	ENSPEMG00000011481	Cstf3	100	92.050	Peromyscus_maniculatus_bairdii
ENSPKIG00000023648	cstf3	99	78.911	ENSPMAG00000007282	cstf3	99	79.050	Petromyzon_marinus
ENSPKIG00000023648	cstf3	100	77.159	ENSPCIG00000030419	-	90	77.437	Phascolarctos_cinereus
ENSPKIG00000023648	cstf3	99	90.000	ENSPCIG00000026406	-	100	91.360	Phascolarctos_cinereus
ENSPKIG00000023648	cstf3	100	93.724	ENSPFOG00000017239	cstf3	100	93.724	Poecilia_formosa
ENSPKIG00000023648	cstf3	100	93.863	ENSPLAG00000009456	cstf3	100	93.863	Poecilia_latipinna
ENSPKIG00000023648	cstf3	100	93.724	ENSPMEG00000010320	cstf3	100	93.724	Poecilia_mexicana
ENSPKIG00000023648	cstf3	100	93.724	ENSPREG00000013549	cstf3	100	93.724	Poecilia_reticulata
ENSPKIG00000023648	cstf3	100	92.469	ENSPPYG00000003375	CSTF3	100	92.469	Pongo_abelii
ENSPKIG00000023648	cstf3	71	94.774	ENSPCAG00000008025	-	71	94.774	Procavia_capensis
ENSPKIG00000023648	cstf3	100	87.169	ENSPCOG00000014417	CSTF3	100	87.169	Propithecus_coquereli
ENSPKIG00000023648	cstf3	100	87.169	ENSPVAG00000002350	CSTF3	100	87.169	Pteropus_vampyrus
ENSPKIG00000023648	cstf3	98	94.318	ENSPNYG00000018259	cstf3	100	93.724	Pundamilia_nyererei
ENSPKIG00000023648	cstf3	100	94.413	ENSPNAG00000020182	cstf3	100	94.413	Pygocentrus_nattereri
ENSPKIG00000023648	cstf3	87	91.680	ENSRNOG00000012089	Cstf3	100	91.680	Rattus_norvegicus
ENSPKIG00000023648	cstf3	99	91.537	ENSRBIG00000044258	CSTF3	100	92.160	Rhinopithecus_bieti
ENSPKIG00000023648	cstf3	100	92.469	ENSRROG00000043450	CSTF3	100	92.469	Rhinopithecus_roxellana
ENSPKIG00000023648	cstf3	100	92.469	ENSSBOG00000024764	CSTF3	98	96.444	Saimiri_boliviensis_boliviensis
ENSPKIG00000023648	cstf3	100	82.148	ENSSHAG00000003135	-	99	82.148	Sarcophilus_harrisii
ENSPKIG00000023648	cstf3	100	91.213	ENSSHAG00000018128	-	100	91.213	Sarcophilus_harrisii
ENSPKIG00000023648	cstf3	100	97.067	ENSSFOG00015022133	cstf3	100	97.067	Scleropages_formosus
ENSPKIG00000023648	cstf3	100	93.445	ENSSMAG00000002197	cstf3	100	93.445	Scophthalmus_maximus
ENSPKIG00000023648	cstf3	100	94.003	ENSSDUG00000020426	cstf3	100	94.003	Seriola_dumerili
ENSPKIG00000023648	cstf3	100	94.142	ENSSLDG00000025649	cstf3	100	94.142	Seriola_lalandi_dorsalis
ENSPKIG00000023648	cstf3	100	92.329	ENSSARG00000000391	CSTF3	100	92.329	Sorex_araneus
ENSPKIG00000023648	cstf3	96	91.896	ENSSPUG00000010546	CSTF3	100	91.896	Sphenodon_punctatus
ENSPKIG00000023648	cstf3	100	93.724	ENSSPAG00000004958	cstf3	100	93.724	Stegastes_partitus
ENSPKIG00000023648	cstf3	99	92.318	ENSSSCG00000040954	CSTF3	100	92.318	Sus_scrofa
ENSPKIG00000023648	cstf3	99	92.514	ENSTGUG00000005010	CSTF3	100	92.514	Taeniopygia_guttata
ENSPKIG00000023648	cstf3	100	92.887	ENSTRUG00000004959	cstf3	100	92.887	Takifugu_rubripes
ENSPKIG00000023648	cstf3	99	93.512	ENSTNIG00000013811	cstf3	99	93.512	Tetraodon_nigroviridis
ENSPKIG00000023648	cstf3	90	89.408	ENSTBEG00000001544	CSTF3	90	89.408	Tupaia_belangeri
ENSPKIG00000023648	cstf3	100	89.540	ENSTTRG00000016366	CSTF3	100	89.540	Tursiops_truncatus
ENSPKIG00000023648	cstf3	99	92.416	ENSUMAG00000018971	CSTF3	100	91.840	Ursus_maritimus
ENSPKIG00000023648	cstf3	100	92.329	ENSVPAG00000007800	CSTF3	100	92.329	Vicugna_pacos
ENSPKIG00000023648	cstf3	99	92.948	ENSVVUG00000014938	CSTF3	100	92.160	Vulpes_vulpes
ENSPKIG00000023648	cstf3	88	76.094	ENSXETG00000021399	cstf3	100	76.774	Xenopus_tropicalis
ENSPKIG00000023648	cstf3	67	42.798	ENSXETG00000017946	-	100	42.798	Xenopus_tropicalis
ENSPKIG00000023648	cstf3	87	93.429	ENSXCOG00000011741	cstf3	100	93.429	Xiphophorus_couchianus
ENSPKIG00000023648	cstf3	100	93.584	ENSXMAG00000009545	cstf3	100	93.584	Xiphophorus_maculatus